Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13760 and CA264_13765 are separated by 366 nucleotides CA264_13765 and CA264_13770 are separated by 172 nucleotides
CA264_13760: CA264_13760 - succinate--CoA ligase subunit alpha, at 3,215,093 to 3,215,983
_13760
CA264_13765: CA264_13765 - DNA-binding transcriptional regulator OxyR, at 3,216,350 to 3,217,294
_13765
CA264_13770: CA264_13770 - DNA starvation/stationary phase protection protein, at 3,217,467 to 3,217,940
_13770
Position (kb)
3216
3217
3218 Strain fitness (log2 ratio)
-2
-1
0
1 at 3215.972 kb on - strand at 3215.982 kb on - strand at 3215.982 kb on - strand at 3215.982 kb on - strand at 3215.995 kb on - strand at 3215.995 kb on - strand at 3216.001 kb on + strand at 3216.053 kb on - strand at 3216.053 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.131 kb on - strand at 3216.134 kb on + strand at 3216.192 kb on - strand at 3216.203 kb on - strand at 3216.206 kb on + strand at 3216.272 kb on + strand at 3216.272 kb on + strand at 3216.272 kb on + strand at 3216.281 kb on + strand at 3216.281 kb on + strand at 3216.288 kb on + strand at 3216.411 kb on - strand at 3216.412 kb on + strand at 3216.622 kb on + strand, within CA264_13765 at 3216.622 kb on + strand, within CA264_13765 at 3216.752 kb on + strand, within CA264_13765 at 3216.792 kb on + strand, within CA264_13765 at 3216.792 kb on + strand, within CA264_13765 at 3216.792 kb on + strand, within CA264_13765 at 3216.810 kb on + strand, within CA264_13765 at 3216.896 kb on + strand, within CA264_13765 at 3217.100 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.102 kb on + strand, within CA264_13765 at 3217.103 kb on - strand, within CA264_13765 at 3217.103 kb on - strand, within CA264_13765 at 3217.160 kb on + strand, within CA264_13765 at 3217.161 kb on - strand, within CA264_13765 at 3217.268 kb on + strand at 3217.272 kb on + strand at 3217.272 kb on + strand at 3217.277 kb on + strand at 3217.277 kb on + strand at 3217.284 kb on - strand at 3217.303 kb on - strand at 3217.306 kb on - strand at 3217.309 kb on + strand at 3217.349 kb on - strand at 3217.349 kb on - strand at 3217.455 kb on - strand at 3217.493 kb on - strand at 3217.549 kb on - strand, within CA264_13770 at 3217.558 kb on - strand, within CA264_13770 at 3217.561 kb on - strand, within CA264_13770 at 3217.622 kb on + strand, within CA264_13770 at 3217.722 kb on + strand, within CA264_13770 at 3217.725 kb on - strand, within CA264_13770 at 3217.725 kb on - strand, within CA264_13770 at 3217.933 kb on + strand at 3217.934 kb on - strand at 3217.938 kb on + strand at 3217.938 kb on + strand at 3217.939 kb on - strand at 3218.032 kb on - strand at 3218.057 kb on - strand at 3218.057 kb on - strand at 3218.057 kb on - strand at 3218.060 kb on + strand at 3218.060 kb on + strand at 3218.061 kb on - strand at 3218.061 kb on - strand at 3218.062 kb on + strand at 3218.067 kb on + strand at 3218.068 kb on - strand at 3218.078 kb on + strand at 3218.078 kb on + strand at 3218.082 kb on + strand at 3218.102 kb on + strand at 3218.136 kb on + strand at 3218.189 kb on - strand at 3218.197 kb on - strand at 3218.248 kb on - strand at 3218.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,215,972 - -0.1 3,215,982 - -0.4 3,215,982 - +0.7 3,215,982 - +1.1 3,215,995 - -1.2 3,215,995 - -1.1 3,216,001 + -0.3 3,216,053 - -0.3 3,216,053 - -0.4 3,216,131 - +0.7 3,216,131 - +0.1 3,216,131 - -0.1 3,216,131 - -1.0 3,216,131 - -1.0 3,216,131 - -0.3 3,216,134 + +0.3 3,216,192 - +0.1 3,216,203 - +0.7 3,216,206 + -1.1 3,216,272 + -0.9 3,216,272 + +0.8 3,216,272 + -0.2 3,216,281 + -0.7 3,216,281 + +0.2 3,216,288 + +1.5 3,216,411 - -0.5 3,216,412 + +0.9 3,216,622 + CA264_13765 0.29 -0.0 3,216,622 + CA264_13765 0.29 +0.7 3,216,752 + CA264_13765 0.43 +0.8 3,216,792 + CA264_13765 0.47 +0.2 3,216,792 + CA264_13765 0.47 -0.4 3,216,792 + CA264_13765 0.47 +0.8 3,216,810 + CA264_13765 0.49 -0.1 3,216,896 + CA264_13765 0.58 +0.3 3,217,100 + CA264_13765 0.79 +0.9 3,217,102 + CA264_13765 0.80 +0.0 3,217,102 + CA264_13765 0.80 -0.5 3,217,102 + CA264_13765 0.80 -0.7 3,217,102 + CA264_13765 0.80 +0.2 3,217,103 - CA264_13765 0.80 -0.2 3,217,103 - CA264_13765 0.80 +0.6 3,217,160 + CA264_13765 0.86 -0.4 3,217,161 - CA264_13765 0.86 -0.1 3,217,268 + +0.7 3,217,272 + +0.7 3,217,272 + +0.2 3,217,277 + +1.4 3,217,277 + +0.0 3,217,284 - +0.6 3,217,303 - -0.6 3,217,306 - -0.5 3,217,309 + -0.1 3,217,349 - +0.9 3,217,349 - -0.1 3,217,455 - -1.1 3,217,493 - +0.6 3,217,549 - CA264_13770 0.17 -1.2 3,217,558 - CA264_13770 0.19 +0.6 3,217,561 - CA264_13770 0.20 -1.5 3,217,622 + CA264_13770 0.33 +0.5 3,217,722 + CA264_13770 0.54 -0.1 3,217,725 - CA264_13770 0.54 +0.0 3,217,725 - CA264_13770 0.54 -0.7 3,217,933 + -0.2 3,217,934 - +0.8 3,217,938 + +1.2 3,217,938 + +0.5 3,217,939 - -0.5 3,218,032 - -0.2 3,218,057 - +0.1 3,218,057 - -0.1 3,218,057 - +0.2 3,218,060 + +0.0 3,218,060 + +0.8 3,218,061 - -1.1 3,218,061 - -0.2 3,218,062 + +1.4 3,218,067 + -0.7 3,218,068 - +0.0 3,218,078 + +0.1 3,218,078 + +1.2 3,218,082 + -0.3 3,218,102 + +1.1 3,218,136 + -1.4 3,218,189 - -2.1 3,218,197 - -0.2 3,218,248 - -1.1 3,218,293 - +0.1
Or see this region's nucleotide sequence