Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13310 and CA264_13315 are separated by 74 nucleotides CA264_13315 and CA264_13320 are separated by 117 nucleotides
CA264_13310: CA264_13310 - glycosyl hydrolase, at 3,103,822 to 3,106,722
_13310
CA264_13315: CA264_13315 - N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA, at 3,106,797 to 3,107,933
_13315
CA264_13320: CA264_13320 - 3-phosphoglycerate dehydrogenase, at 3,108,051 to 3,109,943
_13320
Position (kb)
3106
3107
3108 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3105.804 kb on + strand, within CA264_13310 at 3105.804 kb on + strand, within CA264_13310 at 3105.944 kb on - strand, within CA264_13310 at 3105.967 kb on + strand, within CA264_13310 at 3105.967 kb on + strand, within CA264_13310 at 3105.983 kb on + strand, within CA264_13310 at 3105.994 kb on + strand, within CA264_13310 at 3106.082 kb on - strand, within CA264_13310 at 3106.082 kb on - strand, within CA264_13310 at 3106.106 kb on - strand, within CA264_13310 at 3106.174 kb on + strand, within CA264_13310 at 3106.174 kb on + strand, within CA264_13310 at 3106.204 kb on + strand, within CA264_13310 at 3106.204 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.262 kb on - strand, within CA264_13310 at 3106.262 kb on - strand, within CA264_13310 at 3106.402 kb on + strand, within CA264_13310 at 3106.402 kb on + strand, within CA264_13310 at 3106.417 kb on + strand, within CA264_13310 at 3106.462 kb on - strand at 3106.584 kb on - strand at 3106.659 kb on - strand at 3106.659 kb on - strand at 3106.664 kb on - strand at 3106.682 kb on + strand at 3106.683 kb on - strand at 3106.683 kb on - strand at 3106.697 kb on - strand at 3106.699 kb on - strand at 3106.734 kb on + strand at 3106.734 kb on + strand at 3106.735 kb on - strand at 3106.740 kb on - strand at 3106.809 kb on - strand at 3106.846 kb on + strand at 3106.858 kb on + strand at 3106.858 kb on + strand at 3106.859 kb on - strand at 3106.859 kb on - strand at 3106.859 kb on - strand at 3106.887 kb on - strand at 3106.899 kb on - strand at 3106.905 kb on + strand at 3106.905 kb on + strand at 3106.960 kb on + strand, within CA264_13315 at 3106.962 kb on + strand, within CA264_13315 at 3106.963 kb on - strand, within CA264_13315 at 3106.963 kb on - strand, within CA264_13315 at 3106.965 kb on - strand, within CA264_13315 at 3106.965 kb on - strand, within CA264_13315 at 3106.965 kb on - strand, within CA264_13315 at 3107.056 kb on + strand, within CA264_13315 at 3107.057 kb on - strand, within CA264_13315 at 3107.113 kb on + strand, within CA264_13315 at 3107.114 kb on - strand, within CA264_13315 at 3107.211 kb on - strand, within CA264_13315 at 3107.275 kb on - strand, within CA264_13315 at 3107.275 kb on - strand, within CA264_13315 at 3107.275 kb on - strand, within CA264_13315 at 3107.280 kb on + strand, within CA264_13315 at 3107.281 kb on - strand, within CA264_13315 at 3107.321 kb on + strand, within CA264_13315 at 3107.425 kb on + strand, within CA264_13315 at 3107.425 kb on + strand, within CA264_13315 at 3107.425 kb on + strand, within CA264_13315 at 3107.607 kb on - strand, within CA264_13315 at 3107.793 kb on + strand, within CA264_13315 at 3107.825 kb on + strand at 3107.872 kb on + strand at 3107.873 kb on - strand at 3107.950 kb on - strand at 3107.959 kb on + strand at 3108.007 kb on + strand at 3108.019 kb on + strand at 3108.020 kb on - strand at 3108.020 kb on - strand at 3108.041 kb on - strand at 3108.041 kb on - strand at 3108.043 kb on - strand at 3108.066 kb on + strand at 3108.071 kb on + strand at 3108.071 kb on + strand at 3108.072 kb on - strand at 3108.095 kb on + strand at 3108.345 kb on + strand, within CA264_13320 at 3108.411 kb on + strand, within CA264_13320 at 3108.412 kb on - strand, within CA264_13320 at 3108.419 kb on - strand, within CA264_13320 at 3108.558 kb on + strand, within CA264_13320 at 3108.558 kb on + strand, within CA264_13320 at 3108.559 kb on - strand, within CA264_13320 at 3108.592 kb on + strand, within CA264_13320 at 3108.881 kb on - strand, within CA264_13320 at 3108.881 kb on - strand, within CA264_13320 at 3108.907 kb on + strand, within CA264_13320
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,105,804 + CA264_13310 0.68 -0.8 3,105,804 + CA264_13310 0.68 +0.3 3,105,944 - CA264_13310 0.73 +0.4 3,105,967 + CA264_13310 0.74 -0.5 3,105,967 + CA264_13310 0.74 -0.3 3,105,983 + CA264_13310 0.74 -0.6 3,105,994 + CA264_13310 0.75 +0.2 3,106,082 - CA264_13310 0.78 +1.6 3,106,082 - CA264_13310 0.78 +0.8 3,106,106 - CA264_13310 0.79 -0.2 3,106,174 + CA264_13310 0.81 +0.2 3,106,174 + CA264_13310 0.81 +0.2 3,106,204 + CA264_13310 0.82 -0.4 3,106,204 + CA264_13310 0.82 +0.3 3,106,261 + CA264_13310 0.84 -0.1 3,106,261 + CA264_13310 0.84 +0.4 3,106,261 + CA264_13310 0.84 +1.0 3,106,261 + CA264_13310 0.84 +0.0 3,106,262 - CA264_13310 0.84 +0.1 3,106,262 - CA264_13310 0.84 +0.6 3,106,402 + CA264_13310 0.89 +0.5 3,106,402 + CA264_13310 0.89 +0.3 3,106,417 + CA264_13310 0.89 +0.5 3,106,462 - +0.4 3,106,584 - -0.1 3,106,659 - -0.2 3,106,659 - +0.7 3,106,664 - -1.2 3,106,682 + -0.0 3,106,683 - +0.4 3,106,683 - -0.4 3,106,697 - +0.2 3,106,699 - -1.0 3,106,734 + +0.3 3,106,734 + +0.3 3,106,735 - -1.7 3,106,740 - +0.8 3,106,809 - -2.7 3,106,846 + -1.9 3,106,858 + -2.3 3,106,858 + -2.9 3,106,859 - -3.4 3,106,859 - -3.6 3,106,859 - -2.3 3,106,887 - -2.8 3,106,899 - -2.2 3,106,905 + -3.9 3,106,905 + -2.6 3,106,960 + CA264_13315 0.14 -1.0 3,106,962 + CA264_13315 0.15 -2.4 3,106,963 - CA264_13315 0.15 -1.8 3,106,963 - CA264_13315 0.15 -1.6 3,106,965 - CA264_13315 0.15 -1.6 3,106,965 - CA264_13315 0.15 -2.8 3,106,965 - CA264_13315 0.15 -0.9 3,107,056 + CA264_13315 0.23 +0.7 3,107,057 - CA264_13315 0.23 -2.4 3,107,113 + CA264_13315 0.28 -3.2 3,107,114 - CA264_13315 0.28 -0.8 3,107,211 - CA264_13315 0.36 -2.0 3,107,275 - CA264_13315 0.42 -2.2 3,107,275 - CA264_13315 0.42 -2.4 3,107,275 - CA264_13315 0.42 -1.9 3,107,280 + CA264_13315 0.42 -2.2 3,107,281 - CA264_13315 0.43 -3.6 3,107,321 + CA264_13315 0.46 -2.0 3,107,425 + CA264_13315 0.55 -3.0 3,107,425 + CA264_13315 0.55 -2.2 3,107,425 + CA264_13315 0.55 -1.7 3,107,607 - CA264_13315 0.71 -2.2 3,107,793 + CA264_13315 0.88 -1.6 3,107,825 + -2.6 3,107,872 + -2.8 3,107,873 - -3.1 3,107,950 - -2.3 3,107,959 + -1.1 3,108,007 + +0.6 3,108,019 + -0.3 3,108,020 - -1.4 3,108,020 - -0.8 3,108,041 - -2.8 3,108,041 - -1.1 3,108,043 - -0.8 3,108,066 + -0.0 3,108,071 + -0.5 3,108,071 + -0.3 3,108,072 - -1.5 3,108,095 + -0.2 3,108,345 + CA264_13320 0.16 -1.2 3,108,411 + CA264_13320 0.19 +0.0 3,108,412 - CA264_13320 0.19 -1.2 3,108,419 - CA264_13320 0.19 -0.4 3,108,558 + CA264_13320 0.27 -0.0 3,108,558 + CA264_13320 0.27 -0.3 3,108,559 - CA264_13320 0.27 -0.4 3,108,592 + CA264_13320 0.29 -0.2 3,108,881 - CA264_13320 0.44 -0.1 3,108,881 - CA264_13320 0.44 -0.4 3,108,907 + CA264_13320 0.45 +0.3
Or see this region's nucleotide sequence