Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09875 and CA264_09880 overlap by 14 nucleotides CA264_09880 and CA264_09885 are separated by 11 nucleotides
CA264_09875: CA264_09875 - hypothetical protein, at 2,298,283 to 2,299,863
_09875
CA264_09880: CA264_09880 - hypothetical protein, at 2,299,850 to 2,301,601
_09880
CA264_09885: CA264_09885 - hypothetical protein, at 2,301,613 to 2,304,426
_09885
Position (kb)
2299
2300
2301
2302 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2298.988 kb on - strand, within CA264_09875 at 2299.001 kb on - strand, within CA264_09875 at 2299.001 kb on - strand, within CA264_09875 at 2299.076 kb on + strand, within CA264_09875 at 2299.076 kb on - strand, within CA264_09875 at 2299.209 kb on - strand, within CA264_09875 at 2299.209 kb on - strand, within CA264_09875 at 2299.263 kb on + strand, within CA264_09875 at 2299.292 kb on + strand, within CA264_09875 at 2299.292 kb on + strand, within CA264_09875 at 2299.295 kb on - strand, within CA264_09875 at 2299.295 kb on - strand, within CA264_09875 at 2299.295 kb on - strand, within CA264_09875 at 2299.313 kb on + strand, within CA264_09875 at 2299.313 kb on + strand, within CA264_09875 at 2299.317 kb on + strand, within CA264_09875 at 2299.317 kb on + strand, within CA264_09875 at 2299.320 kb on - strand, within CA264_09875 at 2299.499 kb on + strand, within CA264_09875 at 2299.499 kb on + strand, within CA264_09875 at 2299.502 kb on + strand, within CA264_09875 at 2299.502 kb on + strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.503 kb on - strand, within CA264_09875 at 2299.505 kb on + strand, within CA264_09875 at 2299.549 kb on - strand, within CA264_09875 at 2299.630 kb on + strand, within CA264_09875 at 2299.630 kb on + strand, within CA264_09875 at 2299.631 kb on - strand, within CA264_09875 at 2299.637 kb on - strand, within CA264_09875 at 2299.719 kb on - strand at 2299.719 kb on - strand at 2299.742 kb on + strand at 2299.743 kb on - strand at 2299.743 kb on - strand at 2299.811 kb on - strand at 2299.863 kb on + strand at 2299.864 kb on - strand at 2299.864 kb on - strand at 2299.877 kb on - strand at 2299.939 kb on + strand at 2299.944 kb on + strand at 2300.020 kb on + strand at 2300.040 kb on + strand, within CA264_09880 at 2300.041 kb on - strand, within CA264_09880 at 2300.041 kb on - strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.157 kb on + strand, within CA264_09880 at 2300.158 kb on - strand, within CA264_09880 at 2300.161 kb on + strand, within CA264_09880 at 2300.181 kb on + strand, within CA264_09880 at 2300.181 kb on + strand, within CA264_09880 at 2300.199 kb on + strand, within CA264_09880 at 2300.200 kb on - strand, within CA264_09880 at 2300.219 kb on + strand, within CA264_09880 at 2300.231 kb on + strand, within CA264_09880 at 2300.311 kb on - strand, within CA264_09880 at 2300.338 kb on + strand, within CA264_09880 at 2300.358 kb on + strand, within CA264_09880 at 2300.358 kb on + strand, within CA264_09880 at 2300.359 kb on - strand, within CA264_09880 at 2300.359 kb on - strand, within CA264_09880 at 2300.360 kb on + strand, within CA264_09880 at 2300.360 kb on + strand, within CA264_09880 at 2300.361 kb on - strand, within CA264_09880 at 2300.361 kb on - strand, within CA264_09880 at 2300.440 kb on - strand, within CA264_09880 at 2300.446 kb on - strand, within CA264_09880 at 2300.469 kb on - strand, within CA264_09880 at 2300.503 kb on - strand, within CA264_09880 at 2300.538 kb on + strand, within CA264_09880 at 2300.538 kb on + strand, within CA264_09880 at 2300.598 kb on + strand, within CA264_09880 at 2300.598 kb on + strand, within CA264_09880 at 2300.631 kb on - strand, within CA264_09880 at 2300.643 kb on + strand, within CA264_09880 at 2300.787 kb on - strand, within CA264_09880 at 2300.813 kb on + strand, within CA264_09880 at 2300.814 kb on - strand, within CA264_09880 at 2300.947 kb on + strand, within CA264_09880 at 2300.948 kb on - strand, within CA264_09880 at 2300.952 kb on - strand, within CA264_09880 at 2300.980 kb on + strand, within CA264_09880 at 2300.981 kb on - strand, within CA264_09880 at 2300.983 kb on - strand, within CA264_09880 at 2301.116 kb on + strand, within CA264_09880 at 2301.116 kb on + strand, within CA264_09880 at 2301.151 kb on - strand, within CA264_09880 at 2301.175 kb on + strand, within CA264_09880 at 2301.218 kb on + strand, within CA264_09880 at 2301.219 kb on - strand, within CA264_09880 at 2301.270 kb on + strand, within CA264_09880 at 2301.271 kb on - strand, within CA264_09880 at 2301.361 kb on + strand, within CA264_09880 at 2301.441 kb on - strand at 2301.441 kb on - strand at 2301.441 kb on - strand at 2301.481 kb on + strand at 2301.516 kb on - strand at 2301.516 kb on - strand at 2301.535 kb on + strand at 2301.601 kb on + strand at 2301.605 kb on + strand at 2301.606 kb on - strand at 2301.606 kb on - strand at 2301.621 kb on + strand at 2301.658 kb on - strand at 2301.765 kb on - strand at 2301.811 kb on + strand at 2301.833 kb on - strand at 2301.846 kb on + strand at 2301.873 kb on - strand at 2301.988 kb on + strand, within CA264_09885 at 2302.021 kb on + strand, within CA264_09885 at 2302.021 kb on + strand, within CA264_09885 at 2302.022 kb on - strand, within CA264_09885 at 2302.022 kb on - strand, within CA264_09885 at 2302.079 kb on - strand, within CA264_09885 at 2302.100 kb on + strand, within CA264_09885 at 2302.100 kb on + strand, within CA264_09885 at 2302.100 kb on + strand, within CA264_09885 at 2302.101 kb on - strand, within CA264_09885 at 2302.111 kb on - strand, within CA264_09885 at 2302.111 kb on - strand, within CA264_09885 at 2302.111 kb on - strand, within CA264_09885 at 2302.122 kb on + strand, within CA264_09885 at 2302.123 kb on - strand, within CA264_09885 at 2302.133 kb on + strand, within CA264_09885 at 2302.144 kb on + strand, within CA264_09885 at 2302.144 kb on + strand, within CA264_09885 at 2302.144 kb on + strand, within CA264_09885 at 2302.145 kb on - strand, within CA264_09885 at 2302.218 kb on - strand, within CA264_09885 at 2302.223 kb on + strand, within CA264_09885 at 2302.262 kb on + strand, within CA264_09885 at 2302.270 kb on + strand, within CA264_09885 at 2302.271 kb on - strand, within CA264_09885 at 2302.352 kb on + strand, within CA264_09885 at 2302.373 kb on + strand, within CA264_09885 at 2302.391 kb on - strand, within CA264_09885 at 2302.422 kb on - strand, within CA264_09885 at 2302.422 kb on - strand, within CA264_09885 at 2302.422 kb on - strand, within CA264_09885 at 2302.422 kb on - strand, within CA264_09885 at 2302.422 kb on - strand, within CA264_09885 at 2302.460 kb on + strand, within CA264_09885 at 2302.466 kb on + strand, within CA264_09885 at 2302.466 kb on + strand, within CA264_09885 at 2302.466 kb on + strand, within CA264_09885 at 2302.466 kb on + strand, within CA264_09885 at 2302.467 kb on - strand, within CA264_09885
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 2,298,988 - CA264_09875 0.45 +0.1 2,299,001 - CA264_09875 0.45 -0.1 2,299,001 - CA264_09875 0.45 -0.8 2,299,076 + CA264_09875 0.50 -0.2 2,299,076 - CA264_09875 0.50 +0.0 2,299,209 - CA264_09875 0.59 +1.2 2,299,209 - CA264_09875 0.59 +0.3 2,299,263 + CA264_09875 0.62 -0.6 2,299,292 + CA264_09875 0.64 -0.1 2,299,292 + CA264_09875 0.64 -0.3 2,299,295 - CA264_09875 0.64 +0.1 2,299,295 - CA264_09875 0.64 +0.8 2,299,295 - CA264_09875 0.64 -0.8 2,299,313 + CA264_09875 0.65 -0.6 2,299,313 + CA264_09875 0.65 -1.0 2,299,317 + CA264_09875 0.65 +0.6 2,299,317 + CA264_09875 0.65 -0.4 2,299,320 - CA264_09875 0.66 -0.3 2,299,499 + CA264_09875 0.77 -0.2 2,299,499 + CA264_09875 0.77 +0.7 2,299,502 + CA264_09875 0.77 +0.8 2,299,502 + CA264_09875 0.77 +1.2 2,299,503 - CA264_09875 0.77 -0.5 2,299,503 - CA264_09875 0.77 -0.2 2,299,503 - CA264_09875 0.77 -0.1 2,299,503 - CA264_09875 0.77 -0.3 2,299,505 + CA264_09875 0.77 -0.2 2,299,549 - CA264_09875 0.80 -0.2 2,299,630 + CA264_09875 0.85 -0.4 2,299,630 + CA264_09875 0.85 -0.6 2,299,631 - CA264_09875 0.85 +0.2 2,299,637 - CA264_09875 0.86 -0.7 2,299,719 - -0.4 2,299,719 - -0.7 2,299,742 + +0.4 2,299,743 - -0.2 2,299,743 - -0.2 2,299,811 - -1.3 2,299,863 + +0.7 2,299,864 - +0.5 2,299,864 - -0.1 2,299,877 - -0.4 2,299,939 + -0.9 2,299,944 + -0.1 2,300,020 + -0.2 2,300,040 + CA264_09880 0.11 -0.0 2,300,041 - CA264_09880 0.11 +1.3 2,300,041 - CA264_09880 0.11 +0.6 2,300,157 + CA264_09880 0.18 -0.3 2,300,157 + CA264_09880 0.18 +0.9 2,300,157 + CA264_09880 0.18 +1.2 2,300,157 + CA264_09880 0.18 -0.4 2,300,158 - CA264_09880 0.18 +0.6 2,300,161 + CA264_09880 0.18 -0.3 2,300,181 + CA264_09880 0.19 +0.0 2,300,181 + CA264_09880 0.19 -0.8 2,300,199 + CA264_09880 0.20 +0.5 2,300,200 - CA264_09880 0.20 -0.6 2,300,219 + CA264_09880 0.21 +0.1 2,300,231 + CA264_09880 0.22 +0.7 2,300,311 - CA264_09880 0.26 +1.4 2,300,338 + CA264_09880 0.28 -0.4 2,300,358 + CA264_09880 0.29 -0.0 2,300,358 + CA264_09880 0.29 +0.8 2,300,359 - CA264_09880 0.29 +1.5 2,300,359 - CA264_09880 0.29 -0.5 2,300,360 + CA264_09880 0.29 +0.4 2,300,360 + CA264_09880 0.29 -0.2 2,300,361 - CA264_09880 0.29 +1.9 2,300,361 - CA264_09880 0.29 +0.2 2,300,440 - CA264_09880 0.34 -0.5 2,300,446 - CA264_09880 0.34 -0.5 2,300,469 - CA264_09880 0.35 -1.0 2,300,503 - CA264_09880 0.37 +0.0 2,300,538 + CA264_09880 0.39 -0.2 2,300,538 + CA264_09880 0.39 +0.0 2,300,598 + CA264_09880 0.43 +0.8 2,300,598 + CA264_09880 0.43 +0.0 2,300,631 - CA264_09880 0.45 -1.4 2,300,643 + CA264_09880 0.45 +1.0 2,300,787 - CA264_09880 0.53 +0.6 2,300,813 + CA264_09880 0.55 +1.1 2,300,814 - CA264_09880 0.55 +0.6 2,300,947 + CA264_09880 0.63 +0.7 2,300,948 - CA264_09880 0.63 +0.2 2,300,952 - CA264_09880 0.63 +0.7 2,300,980 + CA264_09880 0.64 -0.7 2,300,981 - CA264_09880 0.65 +1.3 2,300,983 - CA264_09880 0.65 -0.1 2,301,116 + CA264_09880 0.72 -0.9 2,301,116 + CA264_09880 0.72 -0.6 2,301,151 - CA264_09880 0.74 -0.1 2,301,175 + CA264_09880 0.76 +0.3 2,301,218 + CA264_09880 0.78 -0.1 2,301,219 - CA264_09880 0.78 +0.8 2,301,270 + CA264_09880 0.81 -0.4 2,301,271 - CA264_09880 0.81 -0.2 2,301,361 + CA264_09880 0.86 -0.2 2,301,441 - -0.6 2,301,441 - +0.3 2,301,441 - -0.5 2,301,481 + +0.1 2,301,516 - -0.4 2,301,516 - +0.3 2,301,535 + -0.2 2,301,601 + -0.2 2,301,605 + +0.1 2,301,606 - +0.0 2,301,606 - +1.3 2,301,621 + +0.3 2,301,658 - -1.2 2,301,765 - +0.2 2,301,811 + -0.7 2,301,833 - +0.0 2,301,846 + +0.8 2,301,873 - -0.4 2,301,988 + CA264_09885 0.13 -0.7 2,302,021 + CA264_09885 0.14 -0.7 2,302,021 + CA264_09885 0.14 -0.6 2,302,022 - CA264_09885 0.15 -0.2 2,302,022 - CA264_09885 0.15 -1.2 2,302,079 - CA264_09885 0.17 +0.9 2,302,100 + CA264_09885 0.17 -0.3 2,302,100 + CA264_09885 0.17 -0.1 2,302,100 + CA264_09885 0.17 +0.1 2,302,101 - CA264_09885 0.17 -0.6 2,302,111 - CA264_09885 0.18 +0.5 2,302,111 - CA264_09885 0.18 +0.7 2,302,111 - CA264_09885 0.18 -0.2 2,302,122 + CA264_09885 0.18 -0.0 2,302,123 - CA264_09885 0.18 +0.8 2,302,133 + CA264_09885 0.18 +0.3 2,302,144 + CA264_09885 0.19 -0.2 2,302,144 + CA264_09885 0.19 +0.5 2,302,144 + CA264_09885 0.19 -0.6 2,302,145 - CA264_09885 0.19 +0.1 2,302,218 - CA264_09885 0.21 -0.6 2,302,223 + CA264_09885 0.22 -0.1 2,302,262 + CA264_09885 0.23 +0.1 2,302,270 + CA264_09885 0.23 +0.6 2,302,271 - CA264_09885 0.23 -0.5 2,302,352 + CA264_09885 0.26 -0.0 2,302,373 + CA264_09885 0.27 +0.3 2,302,391 - CA264_09885 0.28 -0.3 2,302,422 - CA264_09885 0.29 +0.3 2,302,422 - CA264_09885 0.29 -0.3 2,302,422 - CA264_09885 0.29 +1.0 2,302,422 - CA264_09885 0.29 -0.5 2,302,422 - CA264_09885 0.29 +0.0 2,302,460 + CA264_09885 0.30 -1.9 2,302,466 + CA264_09885 0.30 -0.5 2,302,466 + CA264_09885 0.30 +0.6 2,302,466 + CA264_09885 0.30 +0.5 2,302,466 + CA264_09885 0.30 +0.1 2,302,467 - CA264_09885 0.30 +0.4
Or see this region's nucleotide sequence