Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09540 and CA264_09545 are separated by 147 nucleotides CA264_09545 and CA264_09550 are separated by 113 nucleotides CA264_09550 and CA264_09555 are separated by 58 nucleotides
CA264_09540: CA264_09540 - sodium:proton exchanger, at 2,227,503 to 2,228,453
_09540
CA264_09545: CA264_09545 - hypothetical protein, at 2,228,601 to 2,228,960
_09545
CA264_09550: CA264_09550 - hypothetical protein, at 2,229,074 to 2,229,727
_09550
CA264_09555: CA264_09555 - potassium transporter Kup, at 2,229,786 to 2,231,723
_09555
Position (kb)
2228
2229 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2227.727 kb on + strand, within CA264_09540 at 2227.731 kb on - strand, within CA264_09540 at 2227.769 kb on + strand, within CA264_09540 at 2227.770 kb on - strand, within CA264_09540 at 2227.773 kb on + strand, within CA264_09540 at 2227.774 kb on - strand, within CA264_09540 at 2227.825 kb on + strand, within CA264_09540 at 2227.826 kb on - strand, within CA264_09540 at 2227.947 kb on + strand, within CA264_09540 at 2227.947 kb on + strand, within CA264_09540 at 2227.955 kb on + strand, within CA264_09540 at 2228.005 kb on - strand, within CA264_09540 at 2228.006 kb on + strand, within CA264_09540 at 2228.006 kb on + strand, within CA264_09540 at 2228.006 kb on + strand, within CA264_09540 at 2228.006 kb on + strand, within CA264_09540 at 2228.007 kb on - strand, within CA264_09540 at 2228.007 kb on - strand, within CA264_09540 at 2228.007 kb on - strand, within CA264_09540 at 2228.007 kb on - strand, within CA264_09540 at 2228.010 kb on + strand, within CA264_09540 at 2228.026 kb on + strand, within CA264_09540 at 2228.237 kb on + strand, within CA264_09540 at 2228.246 kb on + strand, within CA264_09540 at 2228.246 kb on + strand, within CA264_09540 at 2228.247 kb on - strand, within CA264_09540 at 2228.313 kb on - strand, within CA264_09540 at 2228.328 kb on - strand, within CA264_09540 at 2228.328 kb on - strand, within CA264_09540 at 2228.330 kb on + strand, within CA264_09540 at 2228.331 kb on - strand, within CA264_09540 at 2228.336 kb on - strand, within CA264_09540 at 2228.361 kb on - strand at 2228.361 kb on - strand at 2228.431 kb on - strand at 2228.447 kb on - strand at 2228.479 kb on + strand at 2228.610 kb on - strand at 2228.615 kb on + strand at 2228.615 kb on + strand at 2228.615 kb on + strand at 2228.616 kb on - strand at 2228.616 kb on - strand at 2228.616 kb on - strand at 2228.627 kb on + strand at 2228.848 kb on + strand, within CA264_09545 at 2228.936 kb on + strand at 2228.936 kb on + strand at 2228.949 kb on - strand at 2228.949 kb on - strand at 2228.978 kb on - strand at 2229.018 kb on + strand at 2229.018 kb on + strand at 2229.038 kb on + strand at 2229.039 kb on - strand at 2229.147 kb on - strand, within CA264_09550 at 2229.279 kb on + strand, within CA264_09550 at 2229.280 kb on - strand, within CA264_09550 at 2229.285 kb on + strand, within CA264_09550 at 2229.342 kb on - strand, within CA264_09550 at 2229.462 kb on - strand, within CA264_09550 at 2229.473 kb on - strand, within CA264_09550 at 2229.473 kb on - strand, within CA264_09550 at 2229.656 kb on - strand, within CA264_09550 at 2229.656 kb on - strand, within CA264_09550 at 2229.672 kb on + strand at 2229.764 kb on + strand at 2229.852 kb on + strand at 2229.911 kb on + strand at 2229.930 kb on + strand at 2229.938 kb on + strand at 2229.940 kb on + strand at 2229.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 2,227,727 + CA264_09540 0.24 -0.1 2,227,731 - CA264_09540 0.24 -0.3 2,227,769 + CA264_09540 0.28 -0.6 2,227,770 - CA264_09540 0.28 +0.1 2,227,773 + CA264_09540 0.28 -0.9 2,227,774 - CA264_09540 0.28 -0.6 2,227,825 + CA264_09540 0.34 -0.2 2,227,826 - CA264_09540 0.34 -1.6 2,227,947 + CA264_09540 0.47 +0.6 2,227,947 + CA264_09540 0.47 -0.8 2,227,955 + CA264_09540 0.48 -0.7 2,228,005 - CA264_09540 0.53 -0.1 2,228,006 + CA264_09540 0.53 +1.3 2,228,006 + CA264_09540 0.53 +0.0 2,228,006 + CA264_09540 0.53 -0.5 2,228,006 + CA264_09540 0.53 +0.7 2,228,007 - CA264_09540 0.53 -0.0 2,228,007 - CA264_09540 0.53 -0.9 2,228,007 - CA264_09540 0.53 +0.2 2,228,007 - CA264_09540 0.53 +0.2 2,228,010 + CA264_09540 0.53 -0.4 2,228,026 + CA264_09540 0.55 -0.9 2,228,237 + CA264_09540 0.77 -1.1 2,228,246 + CA264_09540 0.78 +0.3 2,228,246 + CA264_09540 0.78 +1.9 2,228,247 - CA264_09540 0.78 +0.9 2,228,313 - CA264_09540 0.85 +0.7 2,228,328 - CA264_09540 0.87 +1.2 2,228,328 - CA264_09540 0.87 -0.1 2,228,330 + CA264_09540 0.87 +0.6 2,228,331 - CA264_09540 0.87 -0.0 2,228,336 - CA264_09540 0.88 +0.3 2,228,361 - -3.2 2,228,361 - -0.1 2,228,431 - -0.6 2,228,447 - -0.0 2,228,479 + +0.0 2,228,610 - +0.2 2,228,615 + -0.5 2,228,615 + -0.9 2,228,615 + -1.1 2,228,616 - -0.2 2,228,616 - +0.6 2,228,616 - +0.7 2,228,627 + -0.0 2,228,848 + CA264_09545 0.69 +0.2 2,228,936 + +0.9 2,228,936 + -0.2 2,228,949 - -0.2 2,228,949 - -1.2 2,228,978 - -1.6 2,229,018 + +1.7 2,229,018 + +0.4 2,229,038 + +0.0 2,229,039 - +1.3 2,229,147 - CA264_09550 0.11 -0.3 2,229,279 + CA264_09550 0.31 +0.4 2,229,280 - CA264_09550 0.31 -0.5 2,229,285 + CA264_09550 0.32 -0.3 2,229,342 - CA264_09550 0.41 -0.3 2,229,462 - CA264_09550 0.59 +0.6 2,229,473 - CA264_09550 0.61 +0.5 2,229,473 - CA264_09550 0.61 +0.2 2,229,656 - CA264_09550 0.89 -1.1 2,229,656 - CA264_09550 0.89 +0.7 2,229,672 + +0.1 2,229,764 + -0.1 2,229,852 + +0.2 2,229,911 + -0.2 2,229,930 + -0.2 2,229,938 + -0.0 2,229,940 + +0.3 2,229,941 - -0.1
Or see this region's nucleotide sequence