Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08725 and CA264_08730 are separated by 25 nucleotides CA264_08730 and CA264_08735 are separated by 321 nucleotides
CA264_08725: CA264_08725 - hydrophobe/amphiphile efflux-1 family RND transporter, at 2,029,688 to 2,032,855
_08725
CA264_08730: CA264_08730 - efflux transporter periplasmic adaptor subunit, at 2,032,881 to 2,033,963
_08730
CA264_08735: CA264_08735 - hypothetical protein, at 2,034,285 to 2,034,710
_08735
Position (kb)
2032
2033
2034 Strain fitness (log2 ratio)
-1
0
1
2 at 2031.948 kb on - strand, within CA264_08725 at 2031.948 kb on - strand, within CA264_08725 at 2032.020 kb on + strand, within CA264_08725 at 2032.020 kb on + strand, within CA264_08725 at 2032.020 kb on + strand, within CA264_08725 at 2032.020 kb on + strand, within CA264_08725 at 2032.021 kb on - strand, within CA264_08725 at 2032.024 kb on + strand, within CA264_08725 at 2032.024 kb on + strand, within CA264_08725 at 2032.024 kb on + strand, within CA264_08725 at 2032.025 kb on - strand, within CA264_08725 at 2032.050 kb on - strand, within CA264_08725 at 2032.073 kb on + strand, within CA264_08725 at 2032.073 kb on + strand, within CA264_08725 at 2032.074 kb on - strand, within CA264_08725 at 2032.074 kb on - strand, within CA264_08725 at 2032.074 kb on - strand, within CA264_08725 at 2032.108 kb on + strand, within CA264_08725 at 2032.108 kb on + strand, within CA264_08725 at 2032.146 kb on + strand, within CA264_08725 at 2032.147 kb on - strand, within CA264_08725 at 2032.150 kb on + strand, within CA264_08725 at 2032.159 kb on - strand, within CA264_08725 at 2032.178 kb on + strand, within CA264_08725 at 2032.296 kb on - strand, within CA264_08725 at 2032.318 kb on + strand, within CA264_08725 at 2032.424 kb on - strand, within CA264_08725 at 2032.440 kb on + strand, within CA264_08725 at 2032.450 kb on + strand, within CA264_08725 at 2032.450 kb on + strand, within CA264_08725 at 2032.451 kb on - strand, within CA264_08725 at 2032.451 kb on - strand, within CA264_08725 at 2032.625 kb on - strand at 2032.652 kb on - strand at 2032.762 kb on + strand at 2032.763 kb on - strand at 2032.790 kb on + strand at 2032.791 kb on - strand at 2032.846 kb on + strand at 2032.849 kb on + strand at 2032.882 kb on + strand at 2032.891 kb on + strand at 2032.892 kb on - strand at 2032.893 kb on + strand at 2032.893 kb on + strand at 2032.989 kb on - strand at 2033.013 kb on + strand, within CA264_08730 at 2033.021 kb on - strand, within CA264_08730 at 2033.063 kb on + strand, within CA264_08730 at 2033.063 kb on + strand, within CA264_08730 at 2033.064 kb on - strand, within CA264_08730 at 2033.089 kb on + strand, within CA264_08730 at 2033.089 kb on + strand, within CA264_08730 at 2033.090 kb on - strand, within CA264_08730 at 2033.090 kb on - strand, within CA264_08730 at 2033.090 kb on - strand, within CA264_08730 at 2033.095 kb on + strand, within CA264_08730 at 2033.095 kb on + strand, within CA264_08730 at 2033.095 kb on + strand, within CA264_08730 at 2033.095 kb on + strand, within CA264_08730 at 2033.095 kb on + strand, within CA264_08730 at 2033.095 kb on + strand, within CA264_08730 at 2033.096 kb on - strand, within CA264_08730 at 2033.096 kb on - strand, within CA264_08730 at 2033.096 kb on - strand, within CA264_08730 at 2033.096 kb on - strand, within CA264_08730 at 2033.389 kb on + strand, within CA264_08730 at 2033.390 kb on - strand, within CA264_08730 at 2033.390 kb on - strand, within CA264_08730 at 2033.392 kb on + strand, within CA264_08730 at 2033.463 kb on + strand, within CA264_08730 at 2033.464 kb on - strand, within CA264_08730 at 2033.686 kb on + strand, within CA264_08730 at 2033.764 kb on + strand, within CA264_08730 at 2033.793 kb on - strand, within CA264_08730 at 2033.799 kb on + strand, within CA264_08730 at 2033.801 kb on + strand, within CA264_08730 at 2033.802 kb on - strand, within CA264_08730 at 2033.818 kb on - strand, within CA264_08730 at 2033.858 kb on + strand at 2033.868 kb on - strand at 2033.915 kb on + strand at 2033.993 kb on + strand at 2034.263 kb on + strand at 2034.263 kb on + strand at 2034.264 kb on - strand at 2034.265 kb on + strand at 2034.284 kb on - strand at 2034.284 kb on - strand at 2034.284 kb on - strand at 2034.286 kb on + strand at 2034.287 kb on - strand at 2034.358 kb on - strand, within CA264_08735 at 2034.385 kb on + strand, within CA264_08735 at 2034.421 kb on + strand, within CA264_08735 at 2034.517 kb on + strand, within CA264_08735 at 2034.517 kb on + strand, within CA264_08735 at 2034.517 kb on + strand, within CA264_08735 at 2034.527 kb on - strand, within CA264_08735 at 2034.633 kb on - strand, within CA264_08735 at 2034.640 kb on + strand, within CA264_08735 at 2034.641 kb on - strand, within CA264_08735 at 2034.641 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.643 kb on - strand, within CA264_08735 at 2034.652 kb on + strand, within CA264_08735 at 2034.674 kb on + strand at 2034.675 kb on - strand at 2034.689 kb on - strand at 2034.725 kb on - strand at 2034.828 kb on + strand at 2034.840 kb on + strand at 2034.840 kb on + strand at 2034.904 kb on - strand at 2034.904 kb on - strand at 2034.915 kb on + strand at 2034.916 kb on - strand at 2034.921 kb on + strand at 2034.937 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 2,031,948 - CA264_08725 0.71 -0.3 2,031,948 - CA264_08725 0.71 -0.3 2,032,020 + CA264_08725 0.74 -1.3 2,032,020 + CA264_08725 0.74 +0.6 2,032,020 + CA264_08725 0.74 +0.4 2,032,020 + CA264_08725 0.74 +0.6 2,032,021 - CA264_08725 0.74 -0.2 2,032,024 + CA264_08725 0.74 -0.3 2,032,024 + CA264_08725 0.74 -0.7 2,032,024 + CA264_08725 0.74 -0.0 2,032,025 - CA264_08725 0.74 -0.6 2,032,050 - CA264_08725 0.75 +0.4 2,032,073 + CA264_08725 0.75 -1.5 2,032,073 + CA264_08725 0.75 +0.2 2,032,074 - CA264_08725 0.75 -0.1 2,032,074 - CA264_08725 0.75 -1.0 2,032,074 - CA264_08725 0.75 +0.6 2,032,108 + CA264_08725 0.76 -0.0 2,032,108 + CA264_08725 0.76 -0.0 2,032,146 + CA264_08725 0.78 -0.5 2,032,147 - CA264_08725 0.78 -0.3 2,032,150 + CA264_08725 0.78 -0.2 2,032,159 - CA264_08725 0.78 -0.8 2,032,178 + CA264_08725 0.79 +0.2 2,032,296 - CA264_08725 0.82 +0.8 2,032,318 + CA264_08725 0.83 +1.3 2,032,424 - CA264_08725 0.86 -1.0 2,032,440 + CA264_08725 0.87 +1.4 2,032,450 + CA264_08725 0.87 -0.9 2,032,450 + CA264_08725 0.87 -0.8 2,032,451 - CA264_08725 0.87 -0.4 2,032,451 - CA264_08725 0.87 +0.6 2,032,625 - -0.1 2,032,652 - +0.2 2,032,762 + +0.5 2,032,763 - -0.1 2,032,790 + +0.0 2,032,791 - +1.6 2,032,846 + -0.2 2,032,849 + -1.0 2,032,882 + +0.4 2,032,891 + +0.1 2,032,892 - -1.0 2,032,893 + +2.4 2,032,893 + +0.6 2,032,989 - -0.9 2,033,013 + CA264_08730 0.12 +1.0 2,033,021 - CA264_08730 0.13 +0.7 2,033,063 + CA264_08730 0.17 -0.4 2,033,063 + CA264_08730 0.17 +1.8 2,033,064 - CA264_08730 0.17 -0.9 2,033,089 + CA264_08730 0.19 -0.7 2,033,089 + CA264_08730 0.19 -1.1 2,033,090 - CA264_08730 0.19 +0.1 2,033,090 - CA264_08730 0.19 +0.8 2,033,090 - CA264_08730 0.19 +0.1 2,033,095 + CA264_08730 0.20 +0.7 2,033,095 + CA264_08730 0.20 +1.3 2,033,095 + CA264_08730 0.20 +1.6 2,033,095 + CA264_08730 0.20 -0.8 2,033,095 + CA264_08730 0.20 -0.5 2,033,095 + CA264_08730 0.20 +0.9 2,033,096 - CA264_08730 0.20 -1.2 2,033,096 - CA264_08730 0.20 +1.1 2,033,096 - CA264_08730 0.20 -0.4 2,033,096 - CA264_08730 0.20 -0.9 2,033,389 + CA264_08730 0.47 -0.3 2,033,390 - CA264_08730 0.47 +0.4 2,033,390 - CA264_08730 0.47 -0.9 2,033,392 + CA264_08730 0.47 -0.7 2,033,463 + CA264_08730 0.54 -0.7 2,033,464 - CA264_08730 0.54 -1.3 2,033,686 + CA264_08730 0.74 -1.2 2,033,764 + CA264_08730 0.82 -0.3 2,033,793 - CA264_08730 0.84 +0.4 2,033,799 + CA264_08730 0.85 -0.9 2,033,801 + CA264_08730 0.85 +0.0 2,033,802 - CA264_08730 0.85 +0.6 2,033,818 - CA264_08730 0.87 +0.7 2,033,858 + +0.5 2,033,868 - +0.3 2,033,915 + -1.3 2,033,993 + -0.8 2,034,263 + +0.6 2,034,263 + -0.2 2,034,264 - +0.6 2,034,265 + -0.3 2,034,284 - +0.7 2,034,284 - -0.2 2,034,284 - -0.1 2,034,286 + +0.2 2,034,287 - -0.2 2,034,358 - CA264_08735 0.17 +0.0 2,034,385 + CA264_08735 0.23 -0.1 2,034,421 + CA264_08735 0.32 -0.6 2,034,517 + CA264_08735 0.54 +0.3 2,034,517 + CA264_08735 0.54 -0.4 2,034,517 + CA264_08735 0.54 -0.1 2,034,527 - CA264_08735 0.57 -0.1 2,034,633 - CA264_08735 0.82 -0.2 2,034,640 + CA264_08735 0.83 -0.0 2,034,641 - CA264_08735 0.84 -0.4 2,034,641 - CA264_08735 0.84 -0.1 2,034,643 - CA264_08735 0.84 -1.3 2,034,643 - CA264_08735 0.84 +1.2 2,034,643 - CA264_08735 0.84 +0.8 2,034,643 - CA264_08735 0.84 -0.9 2,034,643 - CA264_08735 0.84 -0.4 2,034,652 + CA264_08735 0.86 -0.4 2,034,674 + -0.1 2,034,675 - +0.9 2,034,689 - -0.3 2,034,725 - -0.1 2,034,828 + -0.1 2,034,840 + -0.5 2,034,840 + +0.4 2,034,904 - +0.4 2,034,904 - -0.5 2,034,915 + +0.7 2,034,916 - -0.3 2,034,921 + +0.1 2,034,937 - +0.3
Or see this region's nucleotide sequence