Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05655 and CA264_05660 are separated by 184 nucleotides CA264_05660 and CA264_05665 are separated by 193 nucleotides
CA264_05655: CA264_05655 - FAD-binding protein, at 1,313,915 to 1,315,495
_05655
CA264_05660: CA264_05660 - CoA-binding protein, at 1,315,680 to 1,316,042
_05660
CA264_05665: CA264_05665 - hypothetical protein, at 1,316,236 to 1,317,069
_05665
Position (kb)
1315
1316
1317 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1314.712 kb on - strand, within CA264_05655 at 1314.772 kb on + strand, within CA264_05655 at 1314.775 kb on - strand, within CA264_05655 at 1314.779 kb on + strand, within CA264_05655 at 1314.780 kb on - strand, within CA264_05655 at 1314.847 kb on + strand, within CA264_05655 at 1314.848 kb on - strand, within CA264_05655 at 1314.936 kb on + strand, within CA264_05655 at 1314.943 kb on + strand, within CA264_05655 at 1315.265 kb on - strand, within CA264_05655 at 1315.482 kb on + strand at 1315.491 kb on + strand at 1315.492 kb on - strand at 1315.492 kb on - strand at 1315.493 kb on + strand at 1315.493 kb on + strand at 1315.521 kb on + strand at 1315.522 kb on - strand at 1315.522 kb on - strand at 1315.522 kb on - strand at 1315.525 kb on + strand at 1315.525 kb on + strand at 1315.526 kb on - strand at 1315.526 kb on - strand at 1315.526 kb on - strand at 1315.545 kb on + strand at 1315.545 kb on + strand at 1315.546 kb on - strand at 1315.563 kb on + strand at 1315.564 kb on - strand at 1315.580 kb on - strand at 1315.592 kb on - strand at 1315.592 kb on - strand at 1315.696 kb on + strand at 1315.696 kb on + strand at 1315.697 kb on - strand at 1315.699 kb on + strand at 1315.700 kb on - strand at 1315.732 kb on - strand, within CA264_05660 at 1315.732 kb on - strand, within CA264_05660 at 1315.859 kb on + strand, within CA264_05660 at 1315.866 kb on + strand, within CA264_05660 at 1315.866 kb on + strand, within CA264_05660 at 1315.870 kb on + strand, within CA264_05660 at 1315.870 kb on + strand, within CA264_05660 at 1315.896 kb on + strand, within CA264_05660 at 1315.902 kb on + strand, within CA264_05660 at 1315.902 kb on + strand, within CA264_05660 at 1315.902 kb on + strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.903 kb on - strand, within CA264_05660 at 1315.904 kb on + strand, within CA264_05660 at 1315.904 kb on + strand, within CA264_05660 at 1316.018 kb on + strand at 1316.034 kb on - strand at 1316.040 kb on + strand at 1316.092 kb on + strand at 1316.120 kb on - strand at 1316.120 kb on - strand at 1316.127 kb on + strand at 1316.134 kb on + strand at 1316.138 kb on + strand at 1316.176 kb on - strand at 1316.188 kb on - strand at 1316.329 kb on - strand, within CA264_05665 at 1316.589 kb on - strand, within CA264_05665 at 1316.613 kb on + strand, within CA264_05665 at 1316.613 kb on + strand, within CA264_05665 at 1316.641 kb on + strand, within CA264_05665 at 1316.642 kb on - strand, within CA264_05665 at 1316.689 kb on + strand, within CA264_05665 at 1316.713 kb on - strand, within CA264_05665 at 1316.821 kb on + strand, within CA264_05665 at 1316.821 kb on + strand, within CA264_05665 at 1316.875 kb on - strand, within CA264_05665 at 1316.956 kb on + strand, within CA264_05665 at 1316.957 kb on - strand, within CA264_05665 at 1316.957 kb on - strand, within CA264_05665 at 1316.958 kb on + strand, within CA264_05665 at 1316.958 kb on + strand, within CA264_05665 at 1316.964 kb on + strand, within CA264_05665 at 1316.966 kb on + strand, within CA264_05665
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 1,314,712 - CA264_05655 0.50 -1.3 1,314,772 + CA264_05655 0.54 +0.1 1,314,775 - CA264_05655 0.54 -0.4 1,314,779 + CA264_05655 0.55 -2.2 1,314,780 - CA264_05655 0.55 -0.7 1,314,847 + CA264_05655 0.59 -0.9 1,314,848 - CA264_05655 0.59 -0.3 1,314,936 + CA264_05655 0.65 -0.4 1,314,943 + CA264_05655 0.65 +0.6 1,315,265 - CA264_05655 0.85 +0.0 1,315,482 + -1.0 1,315,491 + -0.4 1,315,492 - -0.4 1,315,492 - +0.8 1,315,493 + -0.1 1,315,493 + +0.4 1,315,521 + +0.6 1,315,522 - +0.4 1,315,522 - -0.9 1,315,522 - +1.9 1,315,525 + -0.2 1,315,525 + -0.8 1,315,526 - -0.0 1,315,526 - -0.6 1,315,526 - +0.3 1,315,545 + +0.1 1,315,545 + -0.2 1,315,546 - +0.3 1,315,563 + -0.7 1,315,564 - +1.2 1,315,580 - +0.4 1,315,592 - -0.0 1,315,592 - -0.1 1,315,696 + -0.6 1,315,696 + -1.4 1,315,697 - +0.3 1,315,699 + +0.9 1,315,700 - +0.7 1,315,732 - CA264_05660 0.14 -1.0 1,315,732 - CA264_05660 0.14 -0.7 1,315,859 + CA264_05660 0.49 -0.6 1,315,866 + CA264_05660 0.51 -0.7 1,315,866 + CA264_05660 0.51 +0.2 1,315,870 + CA264_05660 0.52 -1.1 1,315,870 + CA264_05660 0.52 +0.2 1,315,896 + CA264_05660 0.60 +0.6 1,315,902 + CA264_05660 0.61 +2.6 1,315,902 + CA264_05660 0.61 +0.6 1,315,902 + CA264_05660 0.61 +0.7 1,315,903 - CA264_05660 0.61 +0.0 1,315,903 - CA264_05660 0.61 -0.6 1,315,903 - CA264_05660 0.61 +0.1 1,315,903 - CA264_05660 0.61 +1.0 1,315,904 + CA264_05660 0.62 -1.5 1,315,904 + CA264_05660 0.62 +0.3 1,316,018 + -0.7 1,316,034 - +0.0 1,316,040 + +1.9 1,316,092 + +0.0 1,316,120 - +1.0 1,316,120 - +1.1 1,316,127 + -0.4 1,316,134 + -0.2 1,316,138 + +0.5 1,316,176 - -0.2 1,316,188 - -1.5 1,316,329 - CA264_05665 0.11 -0.4 1,316,589 - CA264_05665 0.42 -0.2 1,316,613 + CA264_05665 0.45 -0.0 1,316,613 + CA264_05665 0.45 +0.9 1,316,641 + CA264_05665 0.49 -0.1 1,316,642 - CA264_05665 0.49 +0.1 1,316,689 + CA264_05665 0.54 +0.1 1,316,713 - CA264_05665 0.57 -0.2 1,316,821 + CA264_05665 0.70 +0.3 1,316,821 + CA264_05665 0.70 +0.5 1,316,875 - CA264_05665 0.77 +0.3 1,316,956 + CA264_05665 0.86 -1.0 1,316,957 - CA264_05665 0.86 +0.6 1,316,957 - CA264_05665 0.86 +1.2 1,316,958 + CA264_05665 0.87 +0.5 1,316,958 + CA264_05665 0.87 -0.0 1,316,964 + CA264_05665 0.87 +0.0 1,316,966 + CA264_05665 0.88 -1.1
Or see this region's nucleotide sequence