Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05500 and CA264_05505 are separated by 170 nucleotides CA264_05505 and CA264_05510 are separated by 2 nucleotides CA264_05510 and CA264_05515 are separated by 62 nucleotides
CA264_05500: CA264_05500 - hypothetical protein, at 1,278,712 to 1,279,110
_05500
CA264_05505: CA264_05505 - hypothetical protein, at 1,279,281 to 1,279,709
_05505
CA264_05510: CA264_05510 - UDP-glucose 4-epimerase, at 1,279,712 to 1,280,077
_05510
CA264_05515: CA264_05515 - aldehyde dehydrogenase, at 1,280,140 to 1,281,672
_05515
Position (kb)
1279
1280
1281 Strain fitness (log2 ratio)
-1
0
1
2 at 1278.712 kb on - strand at 1278.731 kb on + strand at 1278.749 kb on + strand at 1278.767 kb on - strand, within CA264_05500 at 1278.915 kb on + strand, within CA264_05500 at 1278.971 kb on + strand, within CA264_05500 at 1279.061 kb on - strand, within CA264_05500 at 1279.117 kb on + strand at 1279.123 kb on - strand at 1279.123 kb on - strand at 1279.168 kb on + strand at 1279.222 kb on - strand at 1279.227 kb on + strand at 1279.227 kb on + strand at 1279.284 kb on + strand at 1279.297 kb on - strand at 1279.313 kb on - strand at 1279.450 kb on + strand, within CA264_05505 at 1279.462 kb on - strand, within CA264_05505 at 1279.466 kb on + strand, within CA264_05505 at 1279.466 kb on + strand, within CA264_05505 at 1279.471 kb on + strand, within CA264_05505 at 1279.471 kb on + strand, within CA264_05505 at 1279.550 kb on + strand, within CA264_05505 at 1279.551 kb on - strand, within CA264_05505 at 1279.551 kb on - strand, within CA264_05505 at 1279.551 kb on - strand, within CA264_05505 at 1279.581 kb on + strand, within CA264_05505 at 1279.581 kb on + strand, within CA264_05505 at 1279.582 kb on - strand, within CA264_05505 at 1279.584 kb on - strand, within CA264_05505 at 1279.688 kb on + strand at 1279.689 kb on - strand at 1279.747 kb on + strand at 1279.878 kb on + strand, within CA264_05510 at 1279.894 kb on - strand, within CA264_05510 at 1279.894 kb on - strand, within CA264_05510 at 1279.954 kb on + strand, within CA264_05510 at 1279.954 kb on + strand, within CA264_05510 at 1279.955 kb on - strand, within CA264_05510 at 1279.955 kb on - strand, within CA264_05510 at 1279.955 kb on - strand, within CA264_05510 at 1280.057 kb on + strand at 1280.088 kb on + strand at 1280.176 kb on - strand at 1280.176 kb on - strand at 1280.379 kb on - strand, within CA264_05515 at 1280.507 kb on - strand, within CA264_05515 at 1280.510 kb on + strand, within CA264_05515 at 1280.510 kb on + strand, within CA264_05515 at 1280.510 kb on + strand, within CA264_05515 at 1280.511 kb on - strand, within CA264_05515 at 1280.511 kb on - strand, within CA264_05515 at 1280.511 kb on - strand, within CA264_05515 at 1280.511 kb on - strand, within CA264_05515 at 1280.511 kb on - strand, within CA264_05515 at 1280.511 kb on - strand, within CA264_05515 at 1280.597 kb on + strand, within CA264_05515 at 1280.597 kb on + strand, within CA264_05515 at 1280.598 kb on - strand, within CA264_05515 at 1280.598 kb on - strand, within CA264_05515 at 1280.606 kb on - strand, within CA264_05515 at 1280.671 kb on + strand, within CA264_05515 at 1280.721 kb on - strand, within CA264_05515 at 1280.953 kb on + strand, within CA264_05515
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 1,278,712 - +0.1 1,278,731 + -0.9 1,278,749 + +0.2 1,278,767 - CA264_05500 0.14 +0.2 1,278,915 + CA264_05500 0.51 +0.5 1,278,971 + CA264_05500 0.65 -0.6 1,279,061 - CA264_05500 0.87 +0.7 1,279,117 + +0.1 1,279,123 - +0.6 1,279,123 - -0.0 1,279,168 + +0.1 1,279,222 - +0.6 1,279,227 + -0.0 1,279,227 + +0.3 1,279,284 + +0.5 1,279,297 - -1.6 1,279,313 - +1.0 1,279,450 + CA264_05505 0.39 +1.2 1,279,462 - CA264_05505 0.42 +0.1 1,279,466 + CA264_05505 0.43 -0.0 1,279,466 + CA264_05505 0.43 +0.4 1,279,471 + CA264_05505 0.44 -0.3 1,279,471 + CA264_05505 0.44 -0.6 1,279,550 + CA264_05505 0.63 +2.0 1,279,551 - CA264_05505 0.63 -0.5 1,279,551 - CA264_05505 0.63 +0.2 1,279,551 - CA264_05505 0.63 -0.2 1,279,581 + CA264_05505 0.70 -0.0 1,279,581 + CA264_05505 0.70 -0.5 1,279,582 - CA264_05505 0.70 -0.3 1,279,584 - CA264_05505 0.71 -0.5 1,279,688 + +0.0 1,279,689 - -0.2 1,279,747 + +0.4 1,279,878 + CA264_05510 0.45 -0.5 1,279,894 - CA264_05510 0.50 -0.0 1,279,894 - CA264_05510 0.50 -1.0 1,279,954 + CA264_05510 0.66 -0.0 1,279,954 + CA264_05510 0.66 +0.1 1,279,955 - CA264_05510 0.66 -0.2 1,279,955 - CA264_05510 0.66 +0.4 1,279,955 - CA264_05510 0.66 -0.1 1,280,057 + +0.4 1,280,088 + -0.5 1,280,176 - -0.2 1,280,176 - -0.6 1,280,379 - CA264_05515 0.16 -0.2 1,280,507 - CA264_05515 0.24 -0.0 1,280,510 + CA264_05515 0.24 -0.8 1,280,510 + CA264_05515 0.24 +1.9 1,280,510 + CA264_05515 0.24 -0.6 1,280,511 - CA264_05515 0.24 +0.5 1,280,511 - CA264_05515 0.24 -0.4 1,280,511 - CA264_05515 0.24 -0.4 1,280,511 - CA264_05515 0.24 +0.1 1,280,511 - CA264_05515 0.24 -0.4 1,280,511 - CA264_05515 0.24 +0.2 1,280,597 + CA264_05515 0.30 -0.1 1,280,597 + CA264_05515 0.30 -0.2 1,280,598 - CA264_05515 0.30 -0.9 1,280,598 - CA264_05515 0.30 -0.3 1,280,606 - CA264_05515 0.30 -0.0 1,280,671 + CA264_05515 0.35 -0.7 1,280,721 - CA264_05515 0.38 -0.1 1,280,953 + CA264_05515 0.53 -0.1
Or see this region's nucleotide sequence