Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01415 and CA264_01420 are separated by 82 nucleotides CA264_01420 and CA264_01425 are separated by 248 nucleotides CA264_01425 and CA264_01430 are separated by 27 nucleotides CA264_01430 and CA264_01435 overlap by 23 nucleotides CA264_01435 and CA264_01440 are separated by 8 nucleotides
CA264_01415: CA264_01415 - trigger factor, at 337,261 to 338,583
_01415
CA264_01420: CA264_01420 - tRNA-Leu, at 338,666 to 338,747
_01420
CA264_01425: CA264_01425 - RelA/SpoT family protein, at 338,996 to 341,188
_01425
CA264_01430: CA264_01430 - transcriptional repressor, at 341,216 to 341,710
_01430
CA264_01435: CA264_01435 - anti-anti-sigma factor, at 341,688 to 342,038
_01435
CA264_01440: CA264_01440 - adenylosuccinate synthase, at 342,047 to 343,330
_01440
Position (kb) 338
339
340
341
342 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 338.007 kb on + strand, within CA264_01415 at 338.008 kb on - strand, within CA264_01415 at 338.021 kb on - strand, within CA264_01415 at 338.091 kb on + strand, within CA264_01415 at 338.203 kb on + strand, within CA264_01415 at 338.204 kb on - strand, within CA264_01415 at 338.356 kb on - strand, within CA264_01415 at 338.356 kb on - strand, within CA264_01415 at 338.412 kb on - strand, within CA264_01415 at 338.438 kb on - strand, within CA264_01415 at 338.569 kb on + strand at 338.612 kb on + strand at 338.616 kb on + strand at 338.641 kb on + strand at 338.766 kb on - strand at 338.783 kb on - strand at 338.796 kb on - strand at 338.807 kb on - strand at 338.847 kb on - strand at 338.883 kb on - strand at 338.896 kb on + strand at 338.897 kb on - strand at 338.897 kb on - strand at 338.906 kb on + strand at 338.909 kb on - strand at 338.919 kb on + strand at 338.936 kb on - strand at 338.936 kb on - strand at 338.939 kb on + strand at 338.939 kb on + strand at 338.940 kb on - strand at 338.940 kb on - strand at 338.941 kb on + strand at 338.942 kb on - strand at 338.945 kb on + strand at 338.945 kb on + strand at 338.945 kb on + strand at 338.945 kb on + strand at 338.946 kb on - strand at 338.946 kb on - strand at 338.946 kb on - strand at 338.946 kb on - strand at 338.946 kb on - strand at 338.947 kb on + strand at 338.948 kb on - strand at 338.948 kb on - strand at 338.948 kb on - strand at 338.977 kb on + strand at 338.977 kb on + strand at 338.978 kb on - strand at 338.979 kb on + strand at 338.979 kb on + strand at 338.979 kb on + strand at 338.979 kb on + strand at 338.979 kb on + strand at 338.982 kb on + strand at 338.982 kb on + strand at 338.982 kb on + strand at 338.983 kb on - strand at 338.983 kb on - strand at 338.983 kb on - strand at 338.983 kb on - strand at 338.984 kb on + strand at 338.985 kb on - strand at 338.985 kb on - strand at 338.993 kb on - strand at 339.006 kb on + strand at 339.007 kb on - strand at 339.027 kb on + strand at 339.028 kb on - strand at 339.030 kb on + strand at 339.031 kb on - strand at 339.038 kb on + strand at 339.057 kb on - strand at 339.161 kb on + strand at 339.161 kb on + strand at 339.161 kb on + strand at 339.161 kb on + strand at 339.161 kb on + strand at 339.162 kb on - strand at 339.221 kb on - strand, within CA264_01425 at 339.321 kb on + strand, within CA264_01425 at 339.519 kb on - strand, within CA264_01425 at 339.519 kb on - strand, within CA264_01425 at 339.554 kb on + strand, within CA264_01425 at 339.554 kb on + strand, within CA264_01425 at 339.555 kb on - strand, within CA264_01425 at 339.555 kb on - strand, within CA264_01425 at 339.585 kb on - strand, within CA264_01425 at 339.608 kb on - strand, within CA264_01425 at 339.608 kb on - strand, within CA264_01425 at 339.609 kb on + strand, within CA264_01425 at 339.609 kb on + strand, within CA264_01425 at 339.609 kb on + strand, within CA264_01425 at 339.609 kb on + strand, within CA264_01425 at 339.609 kb on + strand, within CA264_01425 at 339.609 kb on + strand, within CA264_01425 at 339.610 kb on - strand, within CA264_01425 at 339.610 kb on - strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.611 kb on + strand, within CA264_01425 at 339.612 kb on - strand, within CA264_01425 at 339.612 kb on - strand, within CA264_01425 at 339.612 kb on - strand, within CA264_01425 at 339.676 kb on + strand, within CA264_01425 at 339.688 kb on - strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.707 kb on + strand, within CA264_01425 at 339.708 kb on - strand, within CA264_01425 at 339.708 kb on - strand, within CA264_01425 at 339.715 kb on + strand, within CA264_01425 at 339.749 kb on + strand, within CA264_01425 at 339.749 kb on + strand, within CA264_01425 at 339.749 kb on + strand, within CA264_01425 at 339.750 kb on - strand, within CA264_01425 at 339.750 kb on - strand, within CA264_01425 at 339.750 kb on - strand, within CA264_01425 at 339.872 kb on + strand, within CA264_01425 at 339.872 kb on + strand, within CA264_01425 at 339.872 kb on + strand, within CA264_01425 at 339.872 kb on + strand, within CA264_01425 at 339.872 kb on + strand, within CA264_01425 at 339.872 kb on + strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.873 kb on - strand, within CA264_01425 at 339.877 kb on + strand, within CA264_01425 at 339.878 kb on - strand, within CA264_01425 at 339.878 kb on - strand, within CA264_01425 at 339.878 kb on - strand, within CA264_01425 at 339.878 kb on - strand, within CA264_01425 at 339.881 kb on - strand, within CA264_01425 at 339.881 kb on - strand, within CA264_01425 at 339.882 kb on + strand, within CA264_01425 at 339.883 kb on - strand, within CA264_01425 at 339.883 kb on - strand, within CA264_01425 at 340.022 kb on - strand, within CA264_01425 at 340.047 kb on - strand, within CA264_01425 at 340.064 kb on + strand, within CA264_01425 at 340.065 kb on - strand, within CA264_01425 at 340.065 kb on - strand, within CA264_01425 at 340.066 kb on + strand, within CA264_01425 at 340.235 kb on - strand, within CA264_01425 at 340.235 kb on - strand, within CA264_01425 at 340.246 kb on + strand, within CA264_01425 at 340.318 kb on - strand, within CA264_01425 at 340.343 kb on + strand, within CA264_01425 at 340.344 kb on - strand, within CA264_01425 at 340.344 kb on - strand, within CA264_01425 at 340.345 kb on + strand, within CA264_01425 at 340.418 kb on + strand, within CA264_01425 at 340.418 kb on + strand, within CA264_01425 at 340.418 kb on + strand, within CA264_01425 at 340.450 kb on + strand, within CA264_01425 at 340.577 kb on - strand, within CA264_01425 at 340.601 kb on + strand, within CA264_01425 at 340.601 kb on + strand, within CA264_01425 at 340.625 kb on - strand, within CA264_01425 at 341.162 kb on - strand at 341.197 kb on + strand at 341.198 kb on - strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.208 kb on + strand at 341.209 kb on - strand at 341.210 kb on + strand at 341.210 kb on + strand at 341.211 kb on - strand at 341.214 kb on + strand at 341.214 kb on + strand at 341.215 kb on - strand at 341.224 kb on - strand at 341.224 kb on - strand at 341.231 kb on - strand at 341.231 kb on - strand at 341.327 kb on + strand, within CA264_01430 at 341.411 kb on + strand, within CA264_01430 at 341.411 kb on + strand, within CA264_01430 at 341.576 kb on - strand, within CA264_01430 at 341.576 kb on - strand, within CA264_01430 at 341.634 kb on + strand, within CA264_01430 at 341.634 kb on + strand, within CA264_01430 at 341.635 kb on - strand, within CA264_01430 at 341.694 kb on + strand at 341.708 kb on + strand at 341.709 kb on - strand at 341.796 kb on + strand, within CA264_01435 at 341.797 kb on - strand, within CA264_01435 at 341.835 kb on - strand, within CA264_01435 at 341.924 kb on + strand, within CA264_01435 at 341.959 kb on + strand, within CA264_01435
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 338,007 + CA264_01415 0.56 -0.6 338,008 - CA264_01415 0.56 -1.0 338,021 - CA264_01415 0.57 -1.3 338,091 + CA264_01415 0.63 -0.0 338,203 + CA264_01415 0.71 -0.3 338,204 - CA264_01415 0.71 +1.3 338,356 - CA264_01415 0.83 -0.0 338,356 - CA264_01415 0.83 -0.3 338,412 - CA264_01415 0.87 -2.0 338,438 - CA264_01415 0.89 +0.4 338,569 + -1.1 338,612 + -0.0 338,616 + -0.6 338,641 + +0.1 338,766 - -0.4 338,783 - -0.1 338,796 - +0.1 338,807 - -0.1 338,847 - -1.0 338,883 - -0.7 338,896 + -0.5 338,897 - -0.4 338,897 - -0.5 338,906 + +3.2 338,909 - -0.6 338,919 + +0.1 338,936 - -0.3 338,936 - -0.8 338,939 + -0.0 338,939 + -0.6 338,940 - +0.5 338,940 - +0.5 338,941 + +0.8 338,942 - -0.5 338,945 + +0.4 338,945 + +0.1 338,945 + -0.2 338,945 + +0.1 338,946 - -0.5 338,946 - -0.3 338,946 - +0.1 338,946 - -0.3 338,946 - -0.7 338,947 + +2.1 338,948 - -1.4 338,948 - +0.0 338,948 - -0.5 338,977 + -0.7 338,977 + -0.8 338,978 - -1.4 338,979 + +0.3 338,979 + -0.7 338,979 + +0.6 338,979 + -0.2 338,979 + -0.8 338,982 + -1.1 338,982 + -0.4 338,982 + -0.2 338,983 - -0.7 338,983 - +0.1 338,983 - +1.6 338,983 - -0.7 338,984 + +0.1 338,985 - -0.4 338,985 - -0.1 338,993 - -0.4 339,006 + +1.5 339,007 - -0.4 339,027 + -0.2 339,028 - -1.0 339,030 + -1.4 339,031 - +0.1 339,038 + -0.6 339,057 - -0.4 339,161 + +0.1 339,161 + -0.1 339,161 + -1.2 339,161 + +1.2 339,161 + -0.4 339,162 - -0.3 339,221 - CA264_01425 0.10 +0.2 339,321 + CA264_01425 0.15 -0.7 339,519 - CA264_01425 0.24 -0.8 339,519 - CA264_01425 0.24 +0.1 339,554 + CA264_01425 0.25 -0.1 339,554 + CA264_01425 0.25 +1.0 339,555 - CA264_01425 0.25 +1.3 339,555 - CA264_01425 0.25 +0.5 339,585 - CA264_01425 0.27 -0.4 339,608 - CA264_01425 0.28 +2.0 339,608 - CA264_01425 0.28 -0.8 339,609 + CA264_01425 0.28 -0.5 339,609 + CA264_01425 0.28 +0.5 339,609 + CA264_01425 0.28 -0.0 339,609 + CA264_01425 0.28 -0.6 339,609 + CA264_01425 0.28 +1.1 339,609 + CA264_01425 0.28 -1.3 339,610 - CA264_01425 0.28 -0.9 339,610 - CA264_01425 0.28 +0.3 339,611 + CA264_01425 0.28 +0.4 339,611 + CA264_01425 0.28 -0.0 339,611 + CA264_01425 0.28 +0.0 339,611 + CA264_01425 0.28 +0.2 339,611 + CA264_01425 0.28 +0.9 339,611 + CA264_01425 0.28 -1.6 339,611 + CA264_01425 0.28 -0.9 339,611 + CA264_01425 0.28 +0.4 339,612 - CA264_01425 0.28 +1.0 339,612 - CA264_01425 0.28 +0.6 339,612 - CA264_01425 0.28 -0.2 339,676 + CA264_01425 0.31 -0.5 339,688 - CA264_01425 0.32 -0.3 339,707 + CA264_01425 0.32 -0.7 339,707 + CA264_01425 0.32 -0.0 339,707 + CA264_01425 0.32 +0.6 339,707 + CA264_01425 0.32 +0.0 339,707 + CA264_01425 0.32 -0.4 339,707 + CA264_01425 0.32 +0.2 339,707 + CA264_01425 0.32 +0.1 339,708 - CA264_01425 0.32 -0.2 339,708 - CA264_01425 0.32 +0.7 339,715 + CA264_01425 0.33 -0.5 339,749 + CA264_01425 0.34 +0.1 339,749 + CA264_01425 0.34 -0.4 339,749 + CA264_01425 0.34 -0.7 339,750 - CA264_01425 0.34 +0.9 339,750 - CA264_01425 0.34 +0.2 339,750 - CA264_01425 0.34 +0.1 339,872 + CA264_01425 0.40 -0.5 339,872 + CA264_01425 0.40 -0.6 339,872 + CA264_01425 0.40 -0.7 339,872 + CA264_01425 0.40 +1.0 339,872 + CA264_01425 0.40 -0.2 339,872 + CA264_01425 0.40 -0.4 339,873 - CA264_01425 0.40 +0.8 339,873 - CA264_01425 0.40 -0.2 339,873 - CA264_01425 0.40 -0.4 339,873 - CA264_01425 0.40 +0.2 339,873 - CA264_01425 0.40 +0.2 339,873 - CA264_01425 0.40 +0.8 339,873 - CA264_01425 0.40 +0.3 339,877 + CA264_01425 0.40 -0.0 339,878 - CA264_01425 0.40 +0.9 339,878 - CA264_01425 0.40 -0.4 339,878 - CA264_01425 0.40 +0.4 339,878 - CA264_01425 0.40 +0.2 339,881 - CA264_01425 0.40 +0.5 339,881 - CA264_01425 0.40 -1.6 339,882 + CA264_01425 0.40 +0.5 339,883 - CA264_01425 0.40 +0.3 339,883 - CA264_01425 0.40 -0.5 340,022 - CA264_01425 0.47 +0.5 340,047 - CA264_01425 0.48 -0.0 340,064 + CA264_01425 0.49 -0.4 340,065 - CA264_01425 0.49 +0.3 340,065 - CA264_01425 0.49 +0.2 340,066 + CA264_01425 0.49 +0.5 340,235 - CA264_01425 0.56 -0.4 340,235 - CA264_01425 0.56 -0.8 340,246 + CA264_01425 0.57 +0.1 340,318 - CA264_01425 0.60 +0.1 340,343 + CA264_01425 0.61 +1.3 340,344 - CA264_01425 0.61 -0.7 340,344 - CA264_01425 0.61 +0.5 340,345 + CA264_01425 0.62 +0.3 340,418 + CA264_01425 0.65 +1.1 340,418 + CA264_01425 0.65 -1.4 340,418 + CA264_01425 0.65 -1.1 340,450 + CA264_01425 0.66 +0.1 340,577 - CA264_01425 0.72 +0.2 340,601 + CA264_01425 0.73 +1.6 340,601 + CA264_01425 0.73 -0.6 340,625 - CA264_01425 0.74 -1.0 341,162 - +0.0 341,197 + +0.1 341,198 - +0.1 341,199 + -1.2 341,199 + -1.0 341,199 + -0.9 341,199 + +0.4 341,199 + -0.5 341,200 - -0.5 341,200 - -0.4 341,200 - -0.2 341,200 - -0.4 341,200 - +0.7 341,200 - -0.8 341,200 - +0.3 341,200 - +0.8 341,201 + +0.1 341,201 + +0.0 341,201 + -1.2 341,201 + -0.1 341,201 + +0.6 341,202 - -0.8 341,202 - +0.2 341,202 - +0.8 341,202 - +0.2 341,202 - -0.2 341,202 - -0.6 341,203 + -1.6 341,203 + -0.1 341,203 + -0.2 341,203 + -0.7 341,203 + +0.3 341,203 + -0.5 341,203 + -0.5 341,203 + -0.8 341,203 + -0.7 341,204 - -0.1 341,204 - -0.9 341,204 - -0.5 341,204 - -0.3 341,204 - +0.9 341,204 - -0.1 341,204 - +0.6 341,204 - -0.2 341,204 - -0.0 341,204 - -0.1 341,204 - -1.2 341,208 + +0.1 341,209 - +0.3 341,210 + -0.0 341,210 + -0.0 341,211 - -0.2 341,214 + +1.5 341,214 + -0.5 341,215 - +0.1 341,224 - +1.2 341,224 - +0.5 341,231 - +3.8 341,231 - +2.1 341,327 + CA264_01430 0.22 +2.4 341,411 + CA264_01430 0.39 +2.5 341,411 + CA264_01430 0.39 +3.1 341,576 - CA264_01430 0.73 +3.0 341,576 - CA264_01430 0.73 +3.0 341,634 + CA264_01430 0.84 +3.3 341,634 + CA264_01430 0.84 +2.7 341,635 - CA264_01430 0.85 +2.6 341,694 + +0.4 341,708 + +0.2 341,709 - +0.0 341,796 + CA264_01435 0.31 -1.1 341,797 - CA264_01435 0.31 -0.4 341,835 - CA264_01435 0.42 +0.6 341,924 + CA264_01435 0.67 -0.0 341,959 + CA264_01435 0.77 +0.2
Or see this region's nucleotide sequence