Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_5092

Experiment: KB with Chloramphenicol 1.55 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chloramphenicol 1.55 ug/ml
6,041,779	+		Psyr_5091	0.72	+0.8
6,041,780	-		Psyr_5091	0.72	-0.8
6,041,793	+		Psyr_5091	0.72	+1.6
6,041,794	-		Psyr_5091	0.72	+0.8
6,042,010	+		Psyr_5091	0.85	-1.6
6,042,010	+		Psyr_5091	0.85	-1.1
6,042,011	-		Psyr_5091	0.85	-0.2
6,042,011	-		Psyr_5091	0.85	+0.6
6,042,011	-		Psyr_5091	0.85	-0.1
6,042,043	+		Psyr_5091	0.87	+0.4
6,042,043	+		Psyr_5091	0.87	+0.2
6,042,043	+		Psyr_5091	0.87	+1.1
6,042,043	+		Psyr_5091	0.87	+0.1
6,042,043	+		Psyr_5091	0.87	+0.8
6,042,044	-		Psyr_5091	0.87	+1.6
6,042,044	-		Psyr_5091	0.87	+0.1
6,042,044	-		Psyr_5091	0.87	+1.6
6,042,044	-		Psyr_5091	0.87	+0.9
6,042,044	-		Psyr_5091	0.87	+0.2
6,042,044	-		Psyr_5091	0.87	-1.3
6,042,044	-		Psyr_5091	0.87	+0.9
6,042,044	-		Psyr_5091	0.87	-1.0
6,042,044	-		Psyr_5091	0.87	+0.0
6,042,044	-		Psyr_5091	0.87	+0.6
6,042,044	-		Psyr_5091	0.87	+0.9
6,042,052	+		Psyr_5091	0.87	+0.4
6,042,052	+		Psyr_5091	0.87	-0.2
6,042,052	+		Psyr_5091	0.87	-0.3
6,042,052	+		Psyr_5091	0.87	+0.2
6,042,053	-		Psyr_5091	0.87	-1.0
6,042,053	-		Psyr_5091	0.87	-0.6
6,042,053	-		Psyr_5091	0.87	-0.7
6,042,053	-		Psyr_5091	0.87	+1.2
6,042,066	+		Psyr_5091	0.88	+0.4
6,042,066	+		Psyr_5091	0.88	-0.2
6,042,109	+				+0.0
6,042,109	+				+0.2
6,042,109	+				+1.2
6,042,110	-				+1.2
6,042,110	-				-0.6
6,042,147	+				-1.5
6,042,147	+				-0.3
6,042,147	+				+0.6
6,042,147	+				-2.7
6,042,147	+				+0.5
6,042,147	+				-0.4
6,042,148	-				-0.5
6,042,148	-				+1.1
6,042,148	-				+0.8
6,042,205	-				-1.6
6,042,321	+				-0.4
6,042,321	+				+1.5
6,042,325	-				+0.3
6,042,353	+				+0.9
6,042,353	+				+0.5
6,042,354	-				+0.3
6,042,368	-				+0.0
6,042,368	-				-0.5
6,042,370	+				-0.1
6,042,370	+				+0.3
6,042,370	+				+2.5
6,042,371	-				+0.4
6,042,396	+				+0.8
6,042,396	+				+0.4
6,042,397	-				+0.1
6,042,397	-				-0.3
6,042,398	+				+0.5
6,042,398	+				+0.2
6,042,428	+				-1.1
6,042,428	+				+0.4
6,042,428	+				+0.1
6,042,428	+				+0.9
6,042,428	+				-1.7
6,042,429	-				+0.5
6,042,433	-				+0.4
6,042,433	-				+1.2
6,042,433	-				-2.3
6,042,444	-				-1.2
6,042,462	+				-0.4
6,042,462	+				+1.1
6,042,463	-				+0.5
6,042,463	-				-1.4
6,042,463	-				+0.2
6,042,463	-				-2.1
6,042,464	+				-0.0
6,042,465	-				+0.1
6,042,465	-				+2.0
6,042,466	+				+0.3
6,042,466	+				+0.2
6,042,467	-				-0.1
6,042,474	+				-0.6
6,042,474	+				-0.2
6,042,475	-				-1.8
6,042,480	+				-1.4
6,042,480	+				+0.9
6,042,480	+				+1.6
6,042,480	+				+1.7
6,042,480	+				-0.3
6,042,480	+				-0.0
6,042,481	-				+0.6
6,042,481	-				+0.2
6,042,482	+				+0.3
6,042,482	+				+0.6
6,042,482	+				-1.5
6,042,483	-				+0.2
6,042,483	-				+0.3
6,042,483	-				-1.1
6,042,483	-				+0.8
6,042,485	-				+1.2
6,042,485	-				-0.0
6,042,485	-				+0.5
6,042,512	+				-0.5
6,042,513	-				-0.2
6,042,521	+				-0.2
6,042,521	+				+0.7
6,042,521	+				+0.7
6,042,522	-				-0.8
6,042,575	+				-0.0
6,042,851	+				+0.5
6,042,852	-				+0.0
6,042,852	-				+1.0
6,042,982	+		Psyr_5092	0.12	+0.1
6,043,523	-		Psyr_5092	0.40	-0.5
6,043,575	-		Psyr_5092	0.43	+1.9
6,043,576	+		Psyr_5092	0.43	-3.1
6,043,576	+		Psyr_5092	0.43	+1.0
6,043,585	+		Psyr_5092	0.44	-0.0
6,043,585	+		Psyr_5092	0.44	+0.3
6,043,585	+		Psyr_5092	0.44	+0.2
6,043,585	+		Psyr_5092	0.44	-0.4
6,043,585	+		Psyr_5092	0.44	+0.1
6,043,585	+		Psyr_5092	0.44	-0.6
6,043,585	+		Psyr_5092	0.44	-0.1
6,043,586	-		Psyr_5092	0.44	+2.2
6,043,586	-		Psyr_5092	0.44	-0.0
6,043,586	-		Psyr_5092	0.44	-0.0
6,043,586	-		Psyr_5092	0.44	+0.3
6,043,690	+		Psyr_5092	0.49	-1.1
6,043,691	-		Psyr_5092	0.49	+1.2
6,043,712	-		Psyr_5092	0.50	-0.2
6,043,760	+		Psyr_5092	0.53	-0.2
6,043,760	+		Psyr_5092	0.53	-0.4
6,043,760	+		Psyr_5092	0.53	+0.1
6,043,760	+		Psyr_5092	0.53	+0.3
6,043,760	+		Psyr_5092	0.53	-0.6
6,043,760	+		Psyr_5092	0.53	-0.7
6,043,761	-		Psyr_5092	0.53	-1.4
6,043,761	-		Psyr_5092	0.53	-0.0
6,043,761	-		Psyr_5092	0.53	-1.0
6,043,761	-		Psyr_5092	0.53	-0.8
6,043,761	-		Psyr_5092	0.53	+0.9
6,043,761	-		Psyr_5092	0.53	-0.4
6,043,761	-		Psyr_5092	0.53	+0.3
6,043,761	-		Psyr_5092	0.53	+0.1
6,043,761	-		Psyr_5092	0.53	+0.1
6,043,761	-		Psyr_5092	0.53	+0.3
6,043,793	+		Psyr_5092	0.54	-0.3
6,043,793	+		Psyr_5092	0.54	+0.3
6,043,793	+		Psyr_5092	0.54	-0.0
6,043,793	+		Psyr_5092	0.54	+0.2
6,043,793	+		Psyr_5092	0.54	+0.2
6,043,793	+		Psyr_5092	0.54	-1.4
6,043,793	+		Psyr_5092	0.54	+0.5
6,043,794	-		Psyr_5092	0.54	-1.0
6,043,794	-		Psyr_5092	0.54	+1.0
6,043,851	+		Psyr_5092	0.57	-0.0
6,043,852	-		Psyr_5092	0.58	+0.1
6,043,960	-		Psyr_5092	0.63	+0.8
6,044,102	-		Psyr_5092	0.71	+0.4
6,044,195	+		Psyr_5092	0.75	-0.9
6,044,195	+		Psyr_5092	0.75	+0.6
6,044,195	+		Psyr_5092	0.75	+0.4
6,044,195	+		Psyr_5092	0.75	+0.1
6,044,195	+		Psyr_5092	0.75	-0.3
6,044,196	-		Psyr_5092	0.75	+0.2
6,044,196	-		Psyr_5092	0.75	-1.6
6,044,196	-		Psyr_5092	0.75	+0.3
6,044,289	+		Psyr_5092	0.80	+1.2
6,044,322	+		Psyr_5092	0.82	-0.2
6,044,322	+		Psyr_5092	0.82	+0.8
6,044,323	-		Psyr_5092	0.82	-0.2
6,044,323	-		Psyr_5092	0.82	+0.2
6,044,472	+		Psyr_5092	0.90	+0.8
6,044,472	+		Psyr_5092	0.90	+0.6
6,044,472	+		Psyr_5092	0.90	+1.3
6,044,472	+		Psyr_5092	0.90	-0.7
6,044,472	+		Psyr_5092	0.90	+0.4
6,044,472	+		Psyr_5092	0.90	+1.1
6,044,472	+		Psyr_5092	0.90	-0.4
6,044,472	+		Psyr_5092	0.90	+0.9
6,044,472	+		Psyr_5092	0.90	+0.3
6,044,472	+		Psyr_5092	0.90	+0.2
6,044,473	-		Psyr_5092	0.90	+0.1
6,044,473	-		Psyr_5092	0.90	-0.6
6,044,473	-		Psyr_5092	0.90	-0.2
6,044,473	-		Psyr_5092	0.90	-0.3
6,044,473	-		Psyr_5092	0.90	+0.7
6,044,473	-		Psyr_5092	0.90	-0.7
6,044,548	-				-0.3
6,044,647	+				+0.3
6,044,668	+				+0.6
6,044,669	-				-0.5
6,044,669	-				-0.0
6,045,479	+		Psyr_5093	0.31	+1.2
6,045,479	+		Psyr_5093	0.31	-1.2
6,045,480	-		Psyr_5093	0.31	-0.4
6,045,654	+		Psyr_5093	0.40	+1.5
6,045,654	+		Psyr_5093	0.40	+0.4
6,045,654	+		Psyr_5093	0.40	+0.2
6,045,654	+		Psyr_5093	0.40	-0.1
6,045,655	-		Psyr_5093	0.40	-0.8
6,045,655	-		Psyr_5093	0.40	+0.7
6,045,655	-		Psyr_5093	0.40	+1.2