Experiment: KB with Chloramphenicol 1.55 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4123 and Psyr_4124 are separated by 39 nucleotides Psyr_4124 and Psyr_4125 are separated by 139 nucleotides Psyr_4125 and Psyr_4126 are separated by 99 nucleotides
Psyr_4123: Psyr_4123 - tryptophanyl-tRNA synthetase, at 4,912,176 to 4,913,525
_4123
Psyr_4124: Psyr_4124 - conserved hypothetical protein, at 4,913,565 to 4,914,200
_4124
Psyr_4125: Psyr_4125 - Protein of unknown function DUF1043, at 4,914,340 to 4,914,783
_4125
Psyr_4126: Psyr_4126 - adenylylsulfate kinase / sulfate adenylyltransferase subunit 1, at 4,914,883 to 4,916,781
_4126
Position (kb) 4913
4914
4915 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4913.544 kb on - strand at 4913.687 kb on - strand, within Psyr_4124 at 4913.687 kb on - strand, within Psyr_4124 at 4913.687 kb on - strand, within Psyr_4124 at 4913.687 kb on - strand, within Psyr_4124 at 4913.758 kb on - strand, within Psyr_4124 at 4913.861 kb on - strand, within Psyr_4124 at 4913.861 kb on - strand, within Psyr_4124 at 4914.038 kb on + strand, within Psyr_4124 at 4914.039 kb on - strand, within Psyr_4124 at 4914.063 kb on - strand, within Psyr_4124 at 4914.139 kb on + strand at 4914.177 kb on + strand at 4914.177 kb on + strand at 4914.178 kb on - strand at 4914.178 kb on - strand at 4914.178 kb on - strand at 4914.238 kb on + strand at 4914.238 kb on + strand at 4914.261 kb on + strand at 4914.261 kb on + strand at 4914.262 kb on - strand at 4914.262 kb on - strand at 4914.270 kb on + strand at 4914.270 kb on + strand at 4914.271 kb on - strand at 4914.271 kb on - strand at 4914.271 kb on - strand at 4914.271 kb on - strand at 4914.281 kb on + strand at 4914.283 kb on + strand at 4914.283 kb on + strand at 4914.283 kb on + strand at 4914.284 kb on - strand at 4914.284 kb on - strand at 4914.284 kb on - strand at 4914.284 kb on - strand at 4914.309 kb on + strand at 4914.309 kb on + strand at 4914.310 kb on - strand at 4914.310 kb on - strand at 4914.324 kb on + strand at 4914.325 kb on - strand at 4914.326 kb on + strand at 4914.326 kb on + strand at 4914.356 kb on + strand at 4914.357 kb on - strand at 4914.503 kb on + strand, within Psyr_4125 at 4914.503 kb on + strand, within Psyr_4125 at 4914.504 kb on - strand, within Psyr_4125 at 4914.781 kb on + strand at 4914.781 kb on + strand at 4914.781 kb on + strand at 4914.781 kb on + strand at 4914.782 kb on - strand at 4914.782 kb on - strand at 4914.782 kb on - strand at 4914.782 kb on - strand at 4914.782 kb on - strand at 4915.032 kb on - strand at 4915.032 kb on - strand at 4915.032 kb on - strand at 4915.082 kb on + strand, within Psyr_4126 at 4915.082 kb on + strand, within Psyr_4126 at 4915.083 kb on - strand, within Psyr_4126 at 4915.083 kb on - strand, within Psyr_4126 at 4915.083 kb on - strand, within Psyr_4126 at 4915.090 kb on - strand, within Psyr_4126
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Chloramphenicol 1.55 ug/ml remove 4,913,544 - -1.8 4,913,687 - Psyr_4124 0.19 -0.1 4,913,687 - Psyr_4124 0.19 +0.5 4,913,687 - Psyr_4124 0.19 -0.5 4,913,687 - Psyr_4124 0.19 -1.8 4,913,758 - Psyr_4124 0.30 +0.6 4,913,861 - Psyr_4124 0.47 -1.5 4,913,861 - Psyr_4124 0.47 -0.8 4,914,038 + Psyr_4124 0.74 +1.5 4,914,039 - Psyr_4124 0.75 -1.2 4,914,063 - Psyr_4124 0.78 +1.2 4,914,139 + -0.4 4,914,177 + -0.2 4,914,177 + -0.4 4,914,178 - -0.6 4,914,178 - +0.1 4,914,178 - -0.4 4,914,238 + +0.4 4,914,238 + +0.1 4,914,261 + +0.0 4,914,261 + -0.1 4,914,262 - +0.1 4,914,262 - -0.7 4,914,270 + +0.3 4,914,270 + -0.1 4,914,271 - +0.1 4,914,271 - +1.2 4,914,271 - +0.6 4,914,271 - +1.0 4,914,281 + -0.6 4,914,283 + -0.4 4,914,283 + -1.1 4,914,283 + +1.4 4,914,284 - +0.8 4,914,284 - -1.5 4,914,284 - -1.2 4,914,284 - -0.0 4,914,309 + -1.5 4,914,309 + +0.1 4,914,310 - +0.1 4,914,310 - -0.0 4,914,324 + +0.8 4,914,325 - +0.1 4,914,326 + +0.5 4,914,326 + -0.1 4,914,356 + +0.1 4,914,357 - +1.3 4,914,503 + Psyr_4125 0.37 -0.9 4,914,503 + Psyr_4125 0.37 -0.9 4,914,504 - Psyr_4125 0.37 -0.1 4,914,781 + -0.1 4,914,781 + +0.4 4,914,781 + +0.4 4,914,781 + +0.2 4,914,782 - +2.1 4,914,782 - +0.5 4,914,782 - -1.0 4,914,782 - +0.1 4,914,782 - -1.5 4,915,032 - +0.4 4,915,032 - -0.0 4,915,032 - +0.7 4,915,082 + Psyr_4126 0.10 -0.3 4,915,082 + Psyr_4126 0.10 +0.1 4,915,083 - Psyr_4126 0.11 +0.7 4,915,083 - Psyr_4126 0.11 +0.1 4,915,083 - Psyr_4126 0.11 -0.2 4,915,090 - Psyr_4126 0.11 -0.7
Or see this region's nucleotide sequence