Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS20730

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,666,309	+				-0.4
4,666,380	-				+1.8
4,666,385	-				-1.2
4,666,385	-				-0.2
4,666,514	+				-0.0
4,666,514	+				+1.2
4,666,537	+				-3.1
4,666,537	+				+0.0
4,666,537	+				+0.9
4,666,537	+				-1.4
4,666,537	+				-0.5
4,666,537	+				-0.1
4,666,538	-				-0.7
4,666,559	+				-0.8
4,666,559	+				-1.8
4,666,559	+				+0.1
4,666,559	+				+0.7
4,666,559	+				-0.7
4,666,560	-				-1.3
4,666,560	-				-2.5
4,666,560	-				+1.7
4,666,560	-				-2.8
4,666,560	-				+0.7
4,666,562	-				+1.6
4,666,575	+				-0.9
4,666,575	+				+0.9
4,666,575	+				+0.8
4,666,575	+				+0.1
4,666,575	+				+2.6
4,666,671	+		PFLU_RS20725	0.23	-0.4
4,666,679	+		PFLU_RS20725	0.24	-0.7
4,666,679	+		PFLU_RS20725	0.24	+1.1
4,666,679	+		PFLU_RS20725	0.24	-0.7
4,666,679	+		PFLU_RS20725	0.24	+0.7
4,666,679	+		PFLU_RS20725	0.24	-0.2
4,666,679	+		PFLU_RS20725	0.24	-0.4
4,666,679	+		PFLU_RS20725	0.24	-2.3
4,666,679	+		PFLU_RS20725	0.24	-0.4
4,666,679	+		PFLU_RS20725	0.24	-2.9
4,666,679	+		PFLU_RS20725	0.24	-1.8
4,666,679	+		PFLU_RS20725	0.24	+1.2
4,666,680	-		PFLU_RS20725	0.24	+0.7
4,666,680	-		PFLU_RS20725	0.24	-0.2
4,666,680	-		PFLU_RS20725	0.24	+0.1
4,666,680	-		PFLU_RS20725	0.24	+1.1
4,666,680	-		PFLU_RS20725	0.24	+1.1
4,666,680	-		PFLU_RS20725	0.24	-1.1
4,666,680	-		PFLU_RS20725	0.24	+1.0
4,666,680	-		PFLU_RS20725	0.24	-2.0
4,666,680	-		PFLU_RS20725	0.24	+3.2
4,666,680	-		PFLU_RS20725	0.24	-3.0
4,666,680	-		PFLU_RS20725	0.24	-1.7
4,666,680	-		PFLU_RS20725	0.24	+0.4
4,666,727	+		PFLU_RS20725	0.34	-1.4
4,666,727	+		PFLU_RS20725	0.34	+0.5
4,666,727	+		PFLU_RS20725	0.34	-0.1
4,666,727	+		PFLU_RS20725	0.34	-0.2
4,666,728	-		PFLU_RS20725	0.34	+1.0
4,666,728	-		PFLU_RS20725	0.34	-0.1
4,666,768	+		PFLU_RS20725	0.42	-0.7
4,666,768	+		PFLU_RS20725	0.42	-1.5
4,666,768	+		PFLU_RS20725	0.42	-0.7
4,666,769	-		PFLU_RS20725	0.42	-1.1
4,666,769	-		PFLU_RS20725	0.42	-0.6
4,666,769	-		PFLU_RS20725	0.42	+1.3
4,666,808	+		PFLU_RS20725	0.50	-2.1
4,666,808	+		PFLU_RS20725	0.50	+2.6
4,666,809	-		PFLU_RS20725	0.50	+2.5
4,666,835	+		PFLU_RS20725	0.56	-0.2
4,666,836	-		PFLU_RS20725	0.56	+0.1
4,666,844	+		PFLU_RS20725	0.57	-1.1
4,666,910	+		PFLU_RS20725	0.71	-1.5
4,666,911	-		PFLU_RS20725	0.71	-0.7
4,667,037	+				-0.9
4,667,064	+				+1.6
4,667,064	+				+0.7
4,667,064	+				-1.2
4,667,065	-				-1.2
4,667,065	-				+0.3
4,667,065	-				+0.5
4,667,072	+				-0.4
4,667,080	-		PFLU_RS20730	0.12	-0.3
4,667,194	-		PFLU_RS20730	0.63	+0.4
4,667,254	+				+1.0
4,667,254	+				+0.2
4,667,254	+				-1.7
4,667,254	+				-1.1
4,667,254	+				-0.8
4,667,254	+				-1.4
4,667,254	+				-2.1
4,667,255	-				-0.1
4,667,255	-				+0.5
4,667,255	-				+2.1
4,667,255	-				-0.2
4,667,255	-				-0.5
4,667,266	+				+3.4
4,667,266	+				-1.1
4,667,266	+				+0.6
4,667,266	+				+0.8
4,667,267	-				+2.7
4,667,267	-				-2.7
4,667,267	-				+2.0
4,667,289	+				-2.6
4,667,289	+				+0.1
4,667,289	+				-3.3
4,667,289	+				+0.3
4,667,289	+				+0.2
4,667,289	+				+1.9
4,667,289	+				+3.3
4,667,289	+				-0.2
4,667,290	-				+0.1
4,667,290	-				+1.6
4,667,290	-				+0.4
4,667,290	-				+0.5
4,667,290	-				+0.7
4,667,290	-				+0.7
4,667,290	-				+0.0
4,667,362	+				+0.0
4,667,372	-				-1.7
4,667,372	-				+0.0
4,667,406	-				+0.5
4,667,431	+				+0.7
4,667,431	+				+0.7
4,667,432	-				-1.2
4,667,432	-				-0.3
4,667,432	-				+0.5
4,667,457	-				+0.9
4,667,457	-				+2.1
4,667,457	-				+0.4
4,667,485	+				+0.6
4,667,485	+				-0.5
4,667,485	+				-0.7
4,667,485	+				+0.4
4,667,485	+				+0.1
4,667,486	-				-2.0
4,667,489	+				+4.0
4,667,489	+				-0.6
4,667,489	+				+1.2
4,667,489	+				-1.9
4,667,489	+				-1.4
4,667,489	+				-1.2
4,667,490	-				-1.9
4,667,490	-				-0.3
4,667,490	-				+1.4
4,667,490	-				+1.9
4,667,490	-				-0.4
4,667,490	-				-1.7
4,667,490	-				+0.6
4,667,490	-				-2.1
4,667,528	+				-0.2
4,667,612	+		PFLU_RS20735	0.28	+0.1
4,667,612	+		PFLU_RS20735	0.28	+0.0
4,667,612	+		PFLU_RS20735	0.28	+0.0
4,667,612	+		PFLU_RS20735	0.28	+1.3
4,667,613	-		PFLU_RS20735	0.28	-1.6
4,667,613	-		PFLU_RS20735	0.28	+0.5
4,667,613	-		PFLU_RS20735	0.28	+1.6
4,667,641	+		PFLU_RS20735	0.35	-0.1
4,667,675	+		PFLU_RS20735	0.43	-0.1
4,667,675	+		PFLU_RS20735	0.43	-0.3
4,667,676	-		PFLU_RS20735	0.43	-0.1
4,667,703	+		PFLU_RS20735	0.49	+0.2
4,667,703	+		PFLU_RS20735	0.49	+0.3
4,667,703	+		PFLU_RS20735	0.49	-0.4
4,667,704	-		PFLU_RS20735	0.49	-2.2
4,667,704	-		PFLU_RS20735	0.49	-0.0
4,667,704	-		PFLU_RS20735	0.49	-1.8
4,667,727	+		PFLU_RS20735	0.54	-1.7
4,667,727	+		PFLU_RS20735	0.54	-2.8
4,667,727	+		PFLU_RS20735	0.54	-0.2
4,667,779	+		PFLU_RS20735	0.66	+0.7
4,667,779	+		PFLU_RS20735	0.66	-0.5
4,667,780	-		PFLU_RS20735	0.67	-1.2
4,667,780	-		PFLU_RS20735	0.67	-2.4
4,667,783	-		PFLU_RS20735	0.67	-0.1
4,667,796	+		PFLU_RS20735	0.70	-0.0
4,667,796	+		PFLU_RS20735	0.70	+2.0
4,667,796	+		PFLU_RS20735	0.70	-2.5
4,667,796	+		PFLU_RS20735	0.70	-1.2
4,667,796	+		PFLU_RS20735	0.70	+0.8
4,667,796	+		PFLU_RS20735	0.70	+0.0
4,667,796	+		PFLU_RS20735	0.70	+2.1
4,667,796	+		PFLU_RS20735	0.70	-2.2
4,667,796	+		PFLU_RS20735	0.70	+1.3
4,667,796	+		PFLU_RS20735	0.70	+0.1
4,667,796	+		PFLU_RS20735	0.70	+0.0
4,667,797	-		PFLU_RS20735	0.71	+0.2
4,667,797	-		PFLU_RS20735	0.71	-1.4
4,667,797	-		PFLU_RS20735	0.71	-2.0
4,667,797	-		PFLU_RS20735	0.71	-0.1
4,667,797	-		PFLU_RS20735	0.71	+1.2
4,667,797	-		PFLU_RS20735	0.71	-3.2
4,667,797	-		PFLU_RS20735	0.71	-0.7
4,667,797	-		PFLU_RS20735	0.71	-2.2
4,667,797	-		PFLU_RS20735	0.71	+0.2
4,667,797	-		PFLU_RS20735	0.71	+0.2
4,667,797	-		PFLU_RS20735	0.71	-0.2
4,667,797	-		PFLU_RS20735	0.71	+0.0
4,667,797	-		PFLU_RS20735	0.71	+3.4
4,667,797	-		PFLU_RS20735	0.71	-2.6
4,667,797	-		PFLU_RS20735	0.71	-2.0
4,667,797	-		PFLU_RS20735	0.71	-2.2
4,667,798	+		PFLU_RS20735	0.71	+0.6
4,667,799	-		PFLU_RS20735	0.71	-3.0
4,667,808	-		PFLU_RS20735	0.73	+1.0
4,667,839	+		PFLU_RS20735	0.80	-2.2
4,667,839	+		PFLU_RS20735	0.80	-0.8
4,667,839	+		PFLU_RS20735	0.80	+2.9
4,667,839	+		PFLU_RS20735	0.80	-2.6
4,667,840	-		PFLU_RS20735	0.80	+0.6
4,667,878	+		PFLU_RS20735	0.89	+0.1
4,667,886	+				+0.5
4,667,901	+				-0.8
4,667,902	-				-2.4
4,667,922	+				+0.5
4,667,974	-				-1.6
4,667,974	-				+0.2
4,667,974	-				+0.2
4,668,087	+				-0.7
4,668,157	+				+0.3
4,668,157	+				+0.7
4,668,157	+				-1.8
4,668,159	+				-2.0
4,668,159	+				-0.1
4,668,160	-				-0.7