Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS19170

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,335,622	+		PFLU_RS19165	0.57	+1.0
4,335,622	+		PFLU_RS19165	0.57	+0.0
4,335,622	+		PFLU_RS19165	0.57	+2.0
4,335,622	+		PFLU_RS19165	0.57	+0.0
4,335,623	-		PFLU_RS19165	0.57	+0.0
4,335,623	-		PFLU_RS19165	0.57	+0.4
4,335,649	-		PFLU_RS19165	0.59	+3.6
4,335,649	-		PFLU_RS19165	0.59	-0.4
4,335,655	+		PFLU_RS19165	0.60	+1.0
4,335,656	-		PFLU_RS19165	0.60	-1.3
4,335,709	+		PFLU_RS19165	0.64	-0.8
4,335,883	+		PFLU_RS19165	0.77	+0.0
4,335,883	+		PFLU_RS19165	0.77	+0.0
4,335,883	+		PFLU_RS19165	0.77	-0.6
4,335,883	+		PFLU_RS19165	0.77	-0.6
4,335,883	+		PFLU_RS19165	0.77	-0.6
4,335,884	-		PFLU_RS19165	0.77	-0.6
4,335,884	-		PFLU_RS19165	0.77	-1.9
4,335,884	-		PFLU_RS19165	0.77	+0.4
4,335,893	-		PFLU_RS19165	0.78	-0.6
4,335,940	+		PFLU_RS19165	0.82	-1.0
4,335,940	+		PFLU_RS19165	0.82	-1.7
4,335,940	+		PFLU_RS19165	0.82	-1.3
4,335,941	-		PFLU_RS19165	0.82	-0.3
4,335,941	-		PFLU_RS19165	0.82	+1.0
4,336,064	+				-1.2
4,336,064	+				-0.6
4,336,095	+				+2.0
4,336,095	+				+2.0
4,336,096	-				-0.3
4,336,129	+				-1.4
4,336,129	+				-0.6
4,336,129	+				+1.4
4,336,129	+				-1.4
4,336,129	+				+0.0
4,336,130	-				+0.0
4,336,130	-				-0.6
4,336,130	-				-0.8
4,336,130	-				+0.4
4,336,130	-				+0.7
4,336,130	-				+0.0
4,336,219	-				+1.6
4,336,219	-				+2.0
4,336,268	-				+0.8
4,336,281	+				+0.4
4,336,281	+				-0.2
4,336,281	+				+2.4
4,336,281	+				+0.4
4,336,282	-				-0.9
4,336,282	-				-1.6
4,336,282	-				+2.0
4,336,282	-				-2.0
4,336,282	-				+0.4
4,336,282	-				-1.8
4,336,282	-				+0.7
4,336,283	+				-1.0
4,336,283	+				-0.2
4,336,283	+				+0.4
4,336,283	+				-0.3
4,336,283	+				+0.1
4,336,283	+				+3.1
4,336,283	+				-0.6
4,336,283	+				-1.6
4,336,283	+				+2.3
4,336,284	-				-1.4
4,336,284	-				-1.6
4,336,284	-				+1.4
4,336,284	-				+0.6
4,336,284	-				+0.5
4,336,284	-				-0.2
4,336,284	-				-1.8
4,336,284	-				+0.7
4,336,284	-				+3.3
4,336,284	-				+3.4
4,336,286	+				+1.0
4,336,286	+				-1.0
4,336,287	-				+1.3
4,336,287	-				+0.3
4,336,524	+		PFLU_RS19170	0.38	-0.3
4,336,609	+		PFLU_RS19170	0.51	+0.0
4,336,610	-		PFLU_RS19170	0.51	+0.4
4,336,610	-		PFLU_RS19170	0.51	-0.6
4,336,610	-		PFLU_RS19170	0.51	-1.0
4,336,610	-		PFLU_RS19170	0.51	-0.8
4,336,640	+		PFLU_RS19170	0.56	+2.0
4,336,640	+		PFLU_RS19170	0.56	+1.0
4,336,685	+		PFLU_RS19170	0.63	+1.1
4,336,685	+		PFLU_RS19170	0.63	+0.0
4,336,685	+		PFLU_RS19170	0.63	+0.4
4,336,685	+		PFLU_RS19170	0.63	-0.3
4,336,685	+		PFLU_RS19170	0.63	+1.0
4,336,686	-		PFLU_RS19170	0.63	+0.0
4,336,757	+		PFLU_RS19170	0.74	+0.0
4,336,757	+		PFLU_RS19170	0.74	+0.6
4,336,757	+		PFLU_RS19170	0.74	-0.3
4,336,757	+		PFLU_RS19170	0.74	+1.4
4,336,757	+		PFLU_RS19170	0.74	+2.0
4,336,757	+		PFLU_RS19170	0.74	+0.4
4,336,757	+		PFLU_RS19170	0.74	+0.0
4,336,757	+		PFLU_RS19170	0.74	+1.0
4,336,757	+		PFLU_RS19170	0.74	+2.0
4,336,757	+		PFLU_RS19170	0.74	+0.4
4,336,757	+		PFLU_RS19170	0.74	-0.3
4,336,757	+		PFLU_RS19170	0.74	+1.8
4,336,757	+		PFLU_RS19170	0.74	+0.0
4,336,757	+		PFLU_RS19170	0.74	-0.3
4,336,757	+		PFLU_RS19170	0.74	+1.0
4,336,757	+		PFLU_RS19170	0.74	+0.4
4,336,757	+		PFLU_RS19170	0.74	+0.4
4,336,757	+		PFLU_RS19170	0.74	+0.0
4,336,758	-		PFLU_RS19170	0.74	+0.0
4,336,758	-		PFLU_RS19170	0.74	+1.0
4,336,758	-		PFLU_RS19170	0.74	-0.3
4,336,758	-		PFLU_RS19170	0.74	-0.3
4,336,758	-		PFLU_RS19170	0.74	-0.2
4,336,758	-		PFLU_RS19170	0.74	+1.0
4,336,758	-		PFLU_RS19170	0.74	+5.2
4,336,758	-		PFLU_RS19170	0.74	+0.4
4,336,758	-		PFLU_RS19170	0.74	+3.0
4,336,758	-		PFLU_RS19170	0.74	-1.0
4,336,758	-		PFLU_RS19170	0.74	+1.0
4,336,811	+		PFLU_RS19170	0.83	-0.6
4,336,811	+		PFLU_RS19170	0.83	+2.6
4,336,812	-		PFLU_RS19170	0.83	+2.0
4,336,812	-		PFLU_RS19170	0.83	+0.4
4,336,821	-		PFLU_RS19170	0.84	+1.0
4,336,902	+				+1.0
4,336,904	+				+2.6
4,336,904	+				+2.0
4,336,904	+				+0.0
4,336,904	+				+2.0
4,336,905	-				-1.2
4,336,905	-				+0.8
4,336,905	-				+2.0
4,336,905	-				-0.3
4,336,905	-				+1.0
4,336,905	-				-0.6
4,336,912	-				+0.4
4,336,931	+				+1.0
4,336,941	+				+0.0
4,336,941	+				+0.2
4,336,941	+				+1.0
4,336,941	+				+1.0
4,336,941	+				+0.4
4,336,941	+				-0.3
4,336,942	-				+0.6
4,336,942	-				+1.6
4,336,942	-				-2.2
4,336,942	-				-2.0
4,336,942	-				+0.2
4,336,962	+				-0.3
4,336,963	-				-2.8
4,336,984	-				-3.0
4,336,984	-				-1.7
4,336,984	-				+0.3
4,336,984	-				+0.4
4,336,984	-				+2.2
4,337,081	-				-1.4
4,337,081	-				+1.4
4,337,160	+		PFLU_RS19175	0.11	+0.4
4,337,161	-		PFLU_RS19175	0.11	-2.2
4,337,161	-		PFLU_RS19175	0.11	-1.7
4,337,161	-		PFLU_RS19175	0.11	-1.0
4,337,161	-		PFLU_RS19175	0.11	-2.2
4,337,161	-		PFLU_RS19175	0.11	-2.5
4,337,161	-		PFLU_RS19175	0.11	-1.6
4,337,161	-		PFLU_RS19175	0.11	-1.7
4,337,161	-		PFLU_RS19175	0.11	+1.0
4,337,161	-		PFLU_RS19175	0.11	-1.2
4,337,164	-		PFLU_RS19175	0.12	-1.9
4,337,375	+		PFLU_RS19175	0.28	+0.4
4,337,594	-		PFLU_RS19175	0.44	+1.0
4,337,594	-		PFLU_RS19175	0.44	+1.0
4,337,661	+		PFLU_RS19175	0.50	-2.1
4,337,662	-		PFLU_RS19175	0.50	-1.7
4,337,688	-		PFLU_RS19175	0.52	-2.1