Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS16975

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,849,194	+		PFLU_RS16970	0.45	-0.0
3,849,194	+		PFLU_RS16970	0.45	-2.7
3,849,329	+		PFLU_RS16970	0.53	-1.9
3,849,329	+		PFLU_RS16970	0.53	+0.5
3,849,329	+		PFLU_RS16970	0.53	-2.7
3,849,329	+		PFLU_RS16970	0.53	-0.2
3,849,329	+		PFLU_RS16970	0.53	-1.7
3,849,329	+		PFLU_RS16970	0.53	+0.7
3,849,329	+		PFLU_RS16970	0.53	-2.2
3,849,329	+		PFLU_RS16970	0.53	+2.1
3,849,329	+		PFLU_RS16970	0.53	+0.9
3,849,329	+		PFLU_RS16970	0.53	+1.2
3,849,329	+		PFLU_RS16970	0.53	-2.1
3,849,329	+		PFLU_RS16970	0.53	-1.1
3,849,329	+		PFLU_RS16970	0.53	+0.5
3,849,329	+		PFLU_RS16970	0.53	-1.8
3,849,330	-		PFLU_RS16970	0.53	+1.4
3,849,330	-		PFLU_RS16970	0.53	-0.7
3,849,330	-		PFLU_RS16970	0.53	-0.3
3,849,330	-		PFLU_RS16970	0.53	-0.7
3,849,330	-		PFLU_RS16970	0.53	+1.5
3,849,330	-		PFLU_RS16970	0.53	+1.4
3,849,330	-		PFLU_RS16970	0.53	-0.4
3,849,330	-		PFLU_RS16970	0.53	-2.7
3,849,330	-		PFLU_RS16970	0.53	+1.0
3,849,330	-		PFLU_RS16970	0.53	-2.9
3,849,330	-		PFLU_RS16970	0.53	+2.7
3,849,531	+		PFLU_RS16970	0.64	-1.0
3,849,532	-		PFLU_RS16970	0.64	+1.0
3,849,665	+		PFLU_RS16970	0.72	+1.1
3,849,665	+		PFLU_RS16970	0.72	-0.5
3,849,665	+		PFLU_RS16970	0.72	-0.7
3,849,665	+		PFLU_RS16970	0.72	-0.0
3,849,666	-		PFLU_RS16970	0.72	-1.8
3,849,666	-		PFLU_RS16970	0.72	+1.3
3,849,906	+		PFLU_RS16970	0.85	-0.1
3,849,906	+		PFLU_RS16970	0.85	-0.7
3,849,906	+		PFLU_RS16970	0.85	+0.5
3,849,906	+		PFLU_RS16970	0.85	-0.3
3,849,906	+		PFLU_RS16970	0.85	+1.1
3,849,906	+		PFLU_RS16970	0.85	-1.2
3,849,906	+		PFLU_RS16970	0.85	-0.2
3,849,906	+		PFLU_RS16970	0.85	+0.1
3,849,906	+		PFLU_RS16970	0.85	+1.4
3,849,906	+		PFLU_RS16970	0.85	+0.8
3,849,906	+		PFLU_RS16970	0.85	+4.3
3,849,906	+		PFLU_RS16970	0.85	+1.1
3,849,906	+		PFLU_RS16970	0.85	+1.4
3,849,906	+		PFLU_RS16970	0.85	-2.5
3,849,906	+		PFLU_RS16970	0.85	+0.2
3,849,906	+		PFLU_RS16970	0.85	-0.6
3,849,906	+		PFLU_RS16970	0.85	-0.6
3,849,906	+		PFLU_RS16970	0.85	-0.5
3,849,906	+		PFLU_RS16970	0.85	+1.0
3,849,906	+		PFLU_RS16970	0.85	+0.2
3,849,906	+		PFLU_RS16970	0.85	-1.7
3,849,906	+		PFLU_RS16970	0.85	-1.7
3,849,906	+		PFLU_RS16970	0.85	-0.4
3,849,906	+		PFLU_RS16970	0.85	+2.0
3,849,906	+		PFLU_RS16970	0.85	-3.5
3,849,906	+		PFLU_RS16970	0.85	-2.0
3,849,907	-		PFLU_RS16970	0.85	-0.5
3,849,907	-		PFLU_RS16970	0.85	+0.2
3,849,907	-		PFLU_RS16970	0.85	-1.1
3,849,907	-		PFLU_RS16970	0.85	-1.1
3,849,907	-		PFLU_RS16970	0.85	-2.2
3,849,907	-		PFLU_RS16970	0.85	+1.6
3,849,907	-		PFLU_RS16970	0.85	+0.1
3,849,907	-		PFLU_RS16970	0.85	+0.4
3,849,907	-		PFLU_RS16970	0.85	-0.1
3,849,907	-		PFLU_RS16970	0.85	-0.7
3,849,907	-		PFLU_RS16970	0.85	+0.1
3,849,907	-		PFLU_RS16970	0.85	+2.2
3,849,907	-		PFLU_RS16970	0.85	-2.5
3,849,907	-		PFLU_RS16970	0.85	+0.4
3,849,907	-		PFLU_RS16970	0.85	+0.1
3,849,907	-		PFLU_RS16970	0.85	+0.3
3,849,907	-		PFLU_RS16970	0.85	-3.5
3,849,907	-		PFLU_RS16970	0.85	-0.1
3,849,907	-		PFLU_RS16970	0.85	+0.5
3,849,907	-		PFLU_RS16970	0.85	-0.7
3,849,907	-		PFLU_RS16970	0.85	-2.6
3,849,907	-		PFLU_RS16970	0.85	-0.3
3,849,907	-		PFLU_RS16970	0.85	+0.3
3,849,907	-		PFLU_RS16970	0.85	+1.1
3,849,907	-		PFLU_RS16970	0.85	-0.0
3,849,907	-		PFLU_RS16970	0.85	-0.3
3,849,907	-		PFLU_RS16970	0.85	-1.3
3,849,907	-		PFLU_RS16970	0.85	-0.2
3,849,907	-		PFLU_RS16970	0.85	+1.0
3,849,907	-		PFLU_RS16970	0.85	+1.2
3,849,907	-		PFLU_RS16970	0.85	-0.4
3,849,907	-		PFLU_RS16970	0.85	-2.1
3,849,907	-		PFLU_RS16970	0.85	-0.8
3,849,990	-		PFLU_RS16970	0.90	+1.0
3,850,198	+				-0.1
3,850,389	+		PFLU_RS16975	0.51	+1.0
3,850,390	-		PFLU_RS16975	0.51	-1.5
3,850,390	-		PFLU_RS16975	0.51	-0.3
3,850,442	+		PFLU_RS16975	0.63	-1.5
3,850,442	+		PFLU_RS16975	0.63	+0.8
3,850,442	+		PFLU_RS16975	0.63	+0.8
3,850,442	+		PFLU_RS16975	0.63	+0.7
3,850,442	+		PFLU_RS16975	0.63	+0.1
3,850,442	+		PFLU_RS16975	0.63	+1.0
3,850,442	+		PFLU_RS16975	0.63	-1.2
3,850,443	-		PFLU_RS16975	0.63	-0.9
3,850,443	-		PFLU_RS16975	0.63	-1.5
3,850,443	-		PFLU_RS16975	0.63	-0.7
3,850,443	-		PFLU_RS16975	0.63	-1.2
3,850,443	-		PFLU_RS16975	0.63	+0.6
3,850,443	-		PFLU_RS16975	0.63	+2.0
3,850,443	-		PFLU_RS16975	0.63	-1.6
3,850,443	-		PFLU_RS16975	0.63	-1.1
3,850,443	-		PFLU_RS16975	0.63	-1.7
3,850,443	-		PFLU_RS16975	0.63	+1.3
3,850,720	-		PFLU_RS16980	0.10	-2.0
3,850,749	-		PFLU_RS16980	0.13	+1.2
3,850,749	-		PFLU_RS16980	0.13	-2.2
3,850,749	-		PFLU_RS16980	0.13	-2.7
3,850,749	-		PFLU_RS16980	0.13	+0.5
3,850,749	-		PFLU_RS16980	0.13	+0.7
3,850,861	+		PFLU_RS16980	0.23	+1.9
3,850,861	+		PFLU_RS16980	0.23	+1.0
3,850,862	-		PFLU_RS16980	0.23	-0.9
3,850,904	+		PFLU_RS16980	0.27	-0.9
3,850,904	+		PFLU_RS16980	0.27	-0.3
3,850,904	+		PFLU_RS16980	0.27	+1.2
3,850,904	+		PFLU_RS16980	0.27	+0.8
3,850,904	+		PFLU_RS16980	0.27	-3.4
3,850,905	-		PFLU_RS16980	0.27	-0.3
3,851,338	+		PFLU_RS16980	0.66	+1.2
3,851,339	-		PFLU_RS16980	0.66	+1.0
3,851,367	+		PFLU_RS16980	0.68	-0.5
3,851,467	+		PFLU_RS16980	0.77	+4.8
3,851,467	+		PFLU_RS16980	0.77	-0.9
3,851,514	-		PFLU_RS16980	0.81	+0.1
3,851,514	-		PFLU_RS16980	0.81	+1.5
3,851,523	-		PFLU_RS16980	0.82	+0.9
3,851,523	-		PFLU_RS16980	0.82	-1.0
3,851,523	-		PFLU_RS16980	0.82	-2.7