Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10135

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,232,016	+		PFLU_RS10130	0.60	+0.6
2,232,017	-		PFLU_RS10130	0.60	+0.8
2,232,017	-		PFLU_RS10130	0.60	-1.7
2,232,017	-		PFLU_RS10130	0.60	+0.7
2,232,049	+		PFLU_RS10130	0.62	+0.2
2,232,049	+		PFLU_RS10130	0.62	+0.7
2,232,049	+		PFLU_RS10130	0.62	-2.3
2,232,049	+		PFLU_RS10130	0.62	-1.8
2,232,049	+		PFLU_RS10130	0.62	+0.9
2,232,049	+		PFLU_RS10130	0.62	+0.9
2,232,049	+		PFLU_RS10130	0.62	+1.3
2,232,051	+		PFLU_RS10130	0.62	+0.6
2,232,051	+		PFLU_RS10130	0.62	+0.2
2,232,051	+		PFLU_RS10130	0.62	-0.3
2,232,051	+		PFLU_RS10130	0.62	+0.7
2,232,052	-		PFLU_RS10130	0.62	+0.8
2,232,052	-		PFLU_RS10130	0.62	-0.1
2,232,052	-		PFLU_RS10130	0.62	+0.7
2,232,052	-		PFLU_RS10130	0.62	-0.3
2,232,148	+		PFLU_RS10130	0.67	-2.8
2,232,149	-		PFLU_RS10130	0.68	-0.8
2,232,169	-		PFLU_RS10130	0.69	-2.3
2,232,367	+		PFLU_RS10130	0.80	-0.8
2,232,368	-		PFLU_RS10130	0.80	+0.4
2,232,368	-		PFLU_RS10130	0.80	+0.3
2,232,368	-		PFLU_RS10130	0.80	-1.4
2,232,407	-		PFLU_RS10130	0.82	-1.0
2,232,407	-		PFLU_RS10130	0.82	-1.1
2,232,475	+		PFLU_RS10130	0.86	+2.6
2,232,475	+		PFLU_RS10130	0.86	-0.1
2,232,476	-		PFLU_RS10130	0.86	+0.6
2,232,476	-		PFLU_RS10130	0.86	-1.2
2,232,476	-		PFLU_RS10130	0.86	-0.7
2,232,650	-				-0.6
2,232,716	+				-2.1
2,232,717	-				+1.1
2,232,717	-				-2.2
2,232,717	-				+1.8
2,232,717	-				+0.4
2,232,717	-				+0.1
2,232,730	-				-1.0
2,232,775	+				-0.8
2,232,775	+				-0.4
2,232,775	+				-1.4
2,232,776	-				+0.8
2,232,776	-				-1.6
2,232,835	+				-0.7
2,232,835	+				+0.9
2,232,850	+				+0.0
2,232,850	+				+0.9
2,232,850	+				+0.1
2,232,850	+				-0.3
2,232,850	+				-1.5
2,232,851	-				-0.4
2,232,864	+				+1.4
2,232,864	+				-0.4
2,232,864	+				-0.2
2,232,865	-				+0.2
2,232,865	-				+0.0
2,232,895	+				+0.7
2,232,895	+				-1.8
2,232,895	+				-2.6
2,232,896	-				-2.0
2,232,896	-				+0.2
2,233,039	+		PFLU_RS10135	0.51	-1.3
2,233,039	+		PFLU_RS10135	0.51	+0.3
2,233,039	+		PFLU_RS10135	0.51	+0.9
2,233,079	+		PFLU_RS10135	0.66	+2.7
2,233,080	-		PFLU_RS10135	0.66	+1.5
2,233,104	+		PFLU_RS10135	0.74	+1.3
2,233,105	-		PFLU_RS10135	0.75	-1.3
2,233,105	-		PFLU_RS10135	0.75	-0.6
2,233,105	-		PFLU_RS10135	0.75	+0.3
2,233,152	+				+0.0
2,233,158	+				+1.0
2,233,159	-				+1.8
2,233,179	+				-0.9
2,233,185	+				+0.6
2,233,185	+				-0.6
2,233,186	-				-2.0
2,233,188	+				+2.2
2,233,206	-				-0.4
2,233,206	-				+0.1
2,233,219	-				-2.2
2,233,219	-				-1.7
2,233,219	-				-2.4
2,233,234	+				+0.9
2,233,234	+				+0.1
2,233,235	-				+0.2
2,233,289	+				-0.2
2,233,289	+				-1.2
2,233,289	+				+0.5
2,233,300	+				-0.5
2,233,300	+				-1.4
2,233,300	+				+1.4
2,233,301	-				+0.0
2,233,311	+				+2.4
2,233,311	+				-0.8
2,233,312	-				-0.6
2,233,312	-				+1.1
2,233,312	-				-1.1
2,233,312	-				-0.2
2,233,312	-				-2.8
2,233,324	+				+0.9
2,233,324	+				-0.1
2,233,324	+				+0.6
2,233,324	+				+0.9
2,233,324	+				+0.2
2,233,324	+				-0.5
2,233,324	+				+0.9
2,233,324	+				-0.3
2,233,324	+				+0.0
2,233,325	-				+0.5
2,233,325	-				-2.2
2,233,325	-				-0.8
2,233,325	-				-1.4
2,233,325	-				-1.6
2,233,325	-				+0.2
2,233,394	+				+0.4
2,233,394	+				-0.7
2,233,394	+				+0.8
2,233,394	+				+1.1
2,233,394	+				-0.2
2,233,394	+				+0.1
2,233,394	+				-1.6
2,233,394	+				-1.4
2,233,394	+				+0.3
2,233,394	+				+1.8
2,233,442	+		PFLU_RS10140	0.11	+0.9
2,233,442	+		PFLU_RS10140	0.11	+0.6
2,233,442	+		PFLU_RS10140	0.11	+0.4
2,233,442	+		PFLU_RS10140	0.11	+0.6
2,233,443	-		PFLU_RS10140	0.12	+1.8
2,233,443	-		PFLU_RS10140	0.12	-1.6
2,233,454	+		PFLU_RS10140	0.13	+0.8
2,233,454	+		PFLU_RS10140	0.13	-2.4
2,233,454	+		PFLU_RS10140	0.13	+0.2
2,233,455	-		PFLU_RS10140	0.13	-2.8
2,233,455	-		PFLU_RS10140	0.13	-2.1
2,233,455	-		PFLU_RS10140	0.13	-1.1
2,233,455	-		PFLU_RS10140	0.13	-0.6
2,233,460	+		PFLU_RS10140	0.14	-2.2
2,233,460	+		PFLU_RS10140	0.14	+2.1
2,233,460	+		PFLU_RS10140	0.14	-1.0
2,233,460	+		PFLU_RS10140	0.14	-0.1
2,233,460	+		PFLU_RS10140	0.14	-2.1
2,233,461	-		PFLU_RS10140	0.14	+1.4
2,233,461	-		PFLU_RS10140	0.14	+2.3
2,233,557	+		PFLU_RS10140	0.24	-0.4
2,233,558	-		PFLU_RS10140	0.25	+0.0
2,233,558	-		PFLU_RS10140	0.25	+0.1
2,233,728	+		PFLU_RS10140	0.44	+1.6
2,233,730	+		PFLU_RS10140	0.44	+1.6
2,233,730	+		PFLU_RS10140	0.44	-0.0
2,233,730	+		PFLU_RS10140	0.44	+1.6
2,233,730	+		PFLU_RS10140	0.44	+0.9
2,233,730	+		PFLU_RS10140	0.44	+0.6
2,233,730	+		PFLU_RS10140	0.44	-2.7
2,233,730	+		PFLU_RS10140	0.44	-0.9
2,233,730	+		PFLU_RS10140	0.44	+2.1
2,233,730	+		PFLU_RS10140	0.44	-1.8
2,233,730	+		PFLU_RS10140	0.44	-0.4
2,233,730	+		PFLU_RS10140	0.44	+0.7
2,233,730	+		PFLU_RS10140	0.44	+0.8
2,233,730	+		PFLU_RS10140	0.44	-1.9
2,233,730	+		PFLU_RS10140	0.44	+2.0
2,233,730	+		PFLU_RS10140	0.44	+1.1
2,233,730	+		PFLU_RS10140	0.44	+2.5
2,233,730	+		PFLU_RS10140	0.44	+0.2
2,233,730	+		PFLU_RS10140	0.44	-2.0
2,233,730	+		PFLU_RS10140	0.44	-0.5
2,233,730	+		PFLU_RS10140	0.44	-0.4
2,233,731	-		PFLU_RS10140	0.44	-1.4
2,233,731	-		PFLU_RS10140	0.44	+0.9
2,233,731	-		PFLU_RS10140	0.44	-1.6
2,233,731	-		PFLU_RS10140	0.44	-2.5
2,233,731	-		PFLU_RS10140	0.44	+1.0
2,233,731	-		PFLU_RS10140	0.44	+0.6
2,233,731	-		PFLU_RS10140	0.44	+0.1
2,233,731	-		PFLU_RS10140	0.44	+0.3
2,233,731	-		PFLU_RS10140	0.44	-0.6
2,233,731	-		PFLU_RS10140	0.44	+1.2
2,233,731	-		PFLU_RS10140	0.44	-1.0
2,233,731	-		PFLU_RS10140	0.44	+0.6
2,233,731	-		PFLU_RS10140	0.44	-0.6
2,233,731	-		PFLU_RS10140	0.44	+1.6
2,233,731	-		PFLU_RS10140	0.44	+1.1
2,233,731	-		PFLU_RS10140	0.44	-1.9
2,233,731	-		PFLU_RS10140	0.44	+0.0
2,233,737	+		PFLU_RS10140	0.45	-1.1
2,233,737	+		PFLU_RS10140	0.45	-2.6
2,233,737	+		PFLU_RS10140	0.45	-0.3
2,233,737	+		PFLU_RS10140	0.45	-3.1
2,233,737	+		PFLU_RS10140	0.45	+0.6
2,233,738	-		PFLU_RS10140	0.45	-2.4
2,233,738	-		PFLU_RS10140	0.45	-0.3
2,233,738	-		PFLU_RS10140	0.45	-0.9
2,233,865	+		PFLU_RS10140	0.59	-1.4
2,233,884	+		PFLU_RS10140	0.61	+0.1
2,233,884	+		PFLU_RS10140	0.61	-0.3
2,233,884	+		PFLU_RS10140	0.61	-0.8
2,233,884	+		PFLU_RS10140	0.61	-0.3
2,233,884	+		PFLU_RS10140	0.61	+0.3
2,233,884	+		PFLU_RS10140	0.61	+1.4
2,233,884	+		PFLU_RS10140	0.61	+0.4
2,233,884	+		PFLU_RS10140	0.61	+1.3
2,233,884	+		PFLU_RS10140	0.61	+0.7
2,233,884	+		PFLU_RS10140	0.61	-0.6
2,233,884	+		PFLU_RS10140	0.61	-2.8
2,233,884	+		PFLU_RS10140	0.61	+0.1
2,233,884	+		PFLU_RS10140	0.61	-0.4
2,233,884	+		PFLU_RS10140	0.61	-1.8
2,233,884	+		PFLU_RS10140	0.61	+0.7
2,233,884	+		PFLU_RS10140	0.61	-0.9
2,233,884	+		PFLU_RS10140	0.61	+0.6
2,233,884	+		PFLU_RS10140	0.61	+0.7
2,233,884	+		PFLU_RS10140	0.61	+0.5
2,233,884	+		PFLU_RS10140	0.61	-2.0
2,233,884	+		PFLU_RS10140	0.61	+0.4
2,233,884	+		PFLU_RS10140	0.61	-0.4
2,233,884	+		PFLU_RS10140	0.61	+1.2
2,233,884	+		PFLU_RS10140	0.61	-0.1
2,233,884	+		PFLU_RS10140	0.61	+1.0
2,233,884	+		PFLU_RS10140	0.61	+1.4
2,233,884	+		PFLU_RS10140	0.61	+0.8
2,233,884	+		PFLU_RS10140	0.61	+0.0
2,233,885	-		PFLU_RS10140	0.61	-1.1
2,233,885	-		PFLU_RS10140	0.61	-0.1
2,233,885	-		PFLU_RS10140	0.61	-0.9
2,233,885	-		PFLU_RS10140	0.61	-0.1
2,233,885	-		PFLU_RS10140	0.61	-1.9
2,233,885	-		PFLU_RS10140	0.61	+3.0
2,233,885	-		PFLU_RS10140	0.61	-0.9
2,233,885	-		PFLU_RS10140	0.61	+1.3
2,233,885	-		PFLU_RS10140	0.61	-0.3
2,233,885	-		PFLU_RS10140	0.61	-0.1
2,233,885	-		PFLU_RS10140	0.61	+1.6
2,233,885	-		PFLU_RS10140	0.61	+2.3
2,233,885	-		PFLU_RS10140	0.61	-1.7
2,233,885	-		PFLU_RS10140	0.61	+2.0
2,233,885	-		PFLU_RS10140	0.61	+0.9
2,233,885	-		PFLU_RS10140	0.61	-0.1
2,233,885	-		PFLU_RS10140	0.61	-0.1
2,233,885	-		PFLU_RS10140	0.61	+0.1
2,233,885	-		PFLU_RS10140	0.61	+0.4
2,233,885	-		PFLU_RS10140	0.61	-2.7
2,233,885	-		PFLU_RS10140	0.61	+0.1
2,233,885	-		PFLU_RS10140	0.61	+1.9
2,233,885	-		PFLU_RS10140	0.61	+1.2
2,233,885	-		PFLU_RS10140	0.61	-0.1
2,233,885	-		PFLU_RS10140	0.61	+0.7
2,233,885	-		PFLU_RS10140	0.61	-1.2
2,233,885	-		PFLU_RS10140	0.61	-2.2
2,233,885	-		PFLU_RS10140	0.61	-0.2
2,233,885	-		PFLU_RS10140	0.61	+0.5
2,233,885	-		PFLU_RS10140	0.61	+0.9
2,233,885	-		PFLU_RS10140	0.61	-2.7
2,233,885	-		PFLU_RS10140	0.61	+1.6
2,233,885	-		PFLU_RS10140	0.61	+1.0
2,233,931	-		PFLU_RS10140	0.67	+0.7
2,233,957	+		PFLU_RS10140	0.69	-0.3
2,233,957	+		PFLU_RS10140	0.69	-1.0
2,233,957	+		PFLU_RS10140	0.69	+0.0
2,233,957	+		PFLU_RS10140	0.69	-1.1
2,233,957	+		PFLU_RS10140	0.69	+0.1
2,233,957	+		PFLU_RS10140	0.69	-1.1
2,233,957	+		PFLU_RS10140	0.69	+0.3
2,233,957	+		PFLU_RS10140	0.69	+1.2
2,233,957	+		PFLU_RS10140	0.69	-1.0
2,233,957	+		PFLU_RS10140	0.69	+0.4
2,233,957	+		PFLU_RS10140	0.69	+0.2
2,233,958	-		PFLU_RS10140	0.70	-0.1
2,233,958	-		PFLU_RS10140	0.70	+2.1
2,233,958	-		PFLU_RS10140	0.70	-3.1
2,233,958	-		PFLU_RS10140	0.70	-0.1
2,233,958	-		PFLU_RS10140	0.70	-2.0
2,233,958	-		PFLU_RS10140	0.70	+0.1
2,233,958	-		PFLU_RS10140	0.70	+0.1
2,233,958	-		PFLU_RS10140	0.70	+0.2
2,233,958	-		PFLU_RS10140	0.70	-0.8
2,233,958	-		PFLU_RS10140	0.70	-1.9
2,233,958	-		PFLU_RS10140	0.70	+1.2
2,233,958	-		PFLU_RS10140	0.70	+2.0
2,233,958	-		PFLU_RS10140	0.70	-0.4
2,233,959	+		PFLU_RS10140	0.70	-1.4
2,233,959	+		PFLU_RS10140	0.70	-1.2
2,233,959	+		PFLU_RS10140	0.70	+0.9
2,233,959	+		PFLU_RS10140	0.70	+2.9
2,233,959	+		PFLU_RS10140	0.70	-2.0
2,233,959	+		PFLU_RS10140	0.70	+0.0
2,233,959	+		PFLU_RS10140	0.70	+0.2
2,233,959	+		PFLU_RS10140	0.70	+1.9
2,233,959	+		PFLU_RS10140	0.70	+0.0
2,233,959	+		PFLU_RS10140	0.70	-0.2
2,233,959	+		PFLU_RS10140	0.70	+0.8
2,233,959	+		PFLU_RS10140	0.70	+1.1
2,233,959	+		PFLU_RS10140	0.70	-2.6
2,233,959	+		PFLU_RS10140	0.70	+2.3
2,233,959	+		PFLU_RS10140	0.70	+0.3
2,233,959	+		PFLU_RS10140	0.70	+0.5
2,233,959	+		PFLU_RS10140	0.70	+4.1
2,233,959	+		PFLU_RS10140	0.70	-0.1
2,233,959	+		PFLU_RS10140	0.70	-0.5
2,233,959	+		PFLU_RS10140	0.70	-0.3
2,233,959	+		PFLU_RS10140	0.70	-1.8
2,233,959	+		PFLU_RS10140	0.70	+0.5
2,233,959	+		PFLU_RS10140	0.70	-0.4
2,233,959	+		PFLU_RS10140	0.70	+0.3
2,233,959	+		PFLU_RS10140	0.70	-1.7
2,233,959	+		PFLU_RS10140	0.70	+0.5
2,233,959	+		PFLU_RS10140	0.70	+2.5
2,233,959	+		PFLU_RS10140	0.70	+0.3
2,233,959	+		PFLU_RS10140	0.70	-1.3
2,233,959	+		PFLU_RS10140	0.70	-1.7
2,233,959	+		PFLU_RS10140	0.70	+1.3
2,233,959	+		PFLU_RS10140	0.70	+1.1
2,233,959	+		PFLU_RS10140	0.70	+0.6
2,233,960	-		PFLU_RS10140	0.70	-0.3
2,233,960	-		PFLU_RS10140	0.70	+2.8
2,233,960	-		PFLU_RS10140	0.70	+1.0
2,233,960	-		PFLU_RS10140	0.70	+0.8
2,233,960	-		PFLU_RS10140	0.70	+0.6
2,233,960	-		PFLU_RS10140	0.70	-2.4
2,233,960	-		PFLU_RS10140	0.70	-0.5
2,233,960	-		PFLU_RS10140	0.70	+0.6
2,233,960	-		PFLU_RS10140	0.70	-1.6
2,233,960	-		PFLU_RS10140	0.70	+1.1
2,233,960	-		PFLU_RS10140	0.70	+1.2
2,233,960	-		PFLU_RS10140	0.70	+0.4
2,233,960	-		PFLU_RS10140	0.70	-1.9
2,233,960	-		PFLU_RS10140	0.70	+0.9
2,233,960	-		PFLU_RS10140	0.70	-0.7
2,233,960	-		PFLU_RS10140	0.70	-0.7
2,233,960	-		PFLU_RS10140	0.70	-0.6
2,233,960	-		PFLU_RS10140	0.70	-1.2
2,233,960	-		PFLU_RS10140	0.70	+1.8
2,233,960	-		PFLU_RS10140	0.70	-0.4
2,234,048	+		PFLU_RS10140	0.80	-0.1
2,234,048	+		PFLU_RS10140	0.80	+1.4
2,234,048	+		PFLU_RS10140	0.80	+0.3
2,234,048	+		PFLU_RS10140	0.80	+0.4
2,234,048	+		PFLU_RS10140	0.80	+0.5
2,234,049	-		PFLU_RS10140	0.80	-1.2
2,234,049	-		PFLU_RS10140	0.80	-2.2
2,234,066	-		PFLU_RS10140	0.82	-0.0
2,234,117	-		PFLU_RS10140	0.88	+2.2