Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09780

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,154,361	+		PFLU_RS09775	0.21	-2.4
2,154,375	+		PFLU_RS09775	0.23	-0.1
2,154,375	+		PFLU_RS09775	0.23	-0.2
2,154,415	-		PFLU_RS09775	0.26	-1.1
2,154,525	+		PFLU_RS09775	0.36	+1.1
2,154,526	-		PFLU_RS09775	0.36	-2.4
2,154,526	-		PFLU_RS09775	0.36	-1.8
2,154,571	-		PFLU_RS09775	0.40	-1.7
2,154,572	+		PFLU_RS09775	0.41	-2.0
2,154,572	+		PFLU_RS09775	0.41	+1.7
2,154,664	+		PFLU_RS09775	0.49	-1.5
2,154,664	+		PFLU_RS09775	0.49	-0.7
2,154,664	+		PFLU_RS09775	0.49	-2.3
2,154,664	+		PFLU_RS09775	0.49	+1.1
2,154,664	+		PFLU_RS09775	0.49	-1.0
2,154,664	+		PFLU_RS09775	0.49	+0.9
2,154,665	-		PFLU_RS09775	0.49	+1.5
2,154,665	-		PFLU_RS09775	0.49	-1.2
2,154,665	-		PFLU_RS09775	0.49	-0.3
2,154,665	-		PFLU_RS09775	0.49	-1.9
2,154,665	-		PFLU_RS09775	0.49	+2.2
2,154,665	-		PFLU_RS09775	0.49	+2.9
2,154,665	-		PFLU_RS09775	0.49	+2.2
2,154,665	-		PFLU_RS09775	0.49	+1.2
2,154,665	-		PFLU_RS09775	0.49	+0.6
2,154,665	-		PFLU_RS09775	0.49	+0.3
2,154,665	-		PFLU_RS09775	0.49	-2.0
2,154,665	-		PFLU_RS09775	0.49	+0.7
2,154,665	-		PFLU_RS09775	0.49	+0.3
2,154,693	+		PFLU_RS09775	0.52	+0.3
2,154,693	+		PFLU_RS09775	0.52	-0.9
2,154,725	-		PFLU_RS09775	0.54	+0.6
2,154,763	-		PFLU_RS09775	0.58	+0.5
2,154,763	-		PFLU_RS09775	0.58	+0.5
2,154,795	-		PFLU_RS09775	0.61	-0.4
2,154,809	+		PFLU_RS09775	0.62	-1.4
2,154,810	-		PFLU_RS09775	0.62	+1.8
2,154,812	+		PFLU_RS09775	0.62	+1.3
2,154,812	+		PFLU_RS09775	0.62	-1.6
2,154,813	-		PFLU_RS09775	0.62	+0.1
2,154,813	-		PFLU_RS09775	0.62	-0.2
2,154,813	-		PFLU_RS09775	0.62	-0.6
2,154,813	-		PFLU_RS09775	0.62	+1.6
2,154,841	+		PFLU_RS09775	0.65	-1.9
2,154,841	+		PFLU_RS09775	0.65	-1.3
2,154,842	-		PFLU_RS09775	0.65	+0.3
2,154,842	-		PFLU_RS09775	0.65	-0.7
2,154,979	+		PFLU_RS09775	0.78	-0.5
2,154,979	+		PFLU_RS09775	0.78	-1.5
2,154,987	+		PFLU_RS09775	0.78	-2.1
2,155,034	+		PFLU_RS09775	0.83	-1.5
2,155,034	+		PFLU_RS09775	0.83	+0.1
2,155,034	+		PFLU_RS09775	0.83	+0.3
2,155,034	+		PFLU_RS09775	0.83	+1.2
2,155,034	+		PFLU_RS09775	0.83	+2.0
2,155,035	-		PFLU_RS09775	0.83	+0.0
2,155,035	-		PFLU_RS09775	0.83	+1.6
2,155,035	-		PFLU_RS09775	0.83	+3.1
2,155,035	-		PFLU_RS09775	0.83	-0.9
2,155,035	-		PFLU_RS09775	0.83	+0.9
2,155,035	-		PFLU_RS09775	0.83	-1.5
2,155,035	-		PFLU_RS09775	0.83	-0.6
2,155,038	+		PFLU_RS09775	0.83	+0.6
2,155,085	+		PFLU_RS09775	0.87	-0.1
2,155,085	+		PFLU_RS09775	0.87	-2.1
2,155,088	+		PFLU_RS09775	0.88	-0.5
2,155,088	+		PFLU_RS09775	0.88	+1.2
2,155,088	+		PFLU_RS09775	0.88	+0.7
2,155,143	+				-0.2
2,155,143	+				+3.0
2,155,143	+				-1.4
2,155,143	+				-2.5
2,155,143	+				-0.5
2,155,143	+				-1.2
2,155,143	+				-0.6
2,155,144	-				+1.1
2,155,144	-				+0.7
2,155,144	-				+1.0
2,155,144	-				+3.1
2,155,218	+				-1.6
2,155,218	+				+0.7
2,155,218	+				-1.2
2,155,219	-				-0.9
2,155,242	+				-2.4
2,155,243	-				+0.4
2,155,273	-				+0.1
2,155,321	+				+1.1
2,155,321	+				-0.8
2,155,321	+				-1.1
2,155,330	-				+0.1
2,155,330	-				+0.5
2,155,330	-				-1.5
2,155,330	-				-0.5
2,155,409	+				+1.1
2,155,409	+				-0.8
2,155,409	+				+1.0
2,155,410	-				+0.8
2,155,410	-				-0.4
2,155,415	+				+0.7
2,155,415	+				-1.9
2,155,416	-				-1.1
2,155,439	+		PFLU_RS09780	0.11	+1.6
2,155,475	-		PFLU_RS09780	0.15	-0.2
2,155,528	+		PFLU_RS09780	0.20	+0.9
2,155,528	+		PFLU_RS09780	0.20	-3.2
2,155,528	+		PFLU_RS09780	0.20	-3.1
2,155,528	+		PFLU_RS09780	0.20	-1.1
2,155,528	+		PFLU_RS09780	0.20	+1.2
2,155,528	+		PFLU_RS09780	0.20	+0.1
2,155,528	+		PFLU_RS09780	0.20	+1.1
2,155,528	+		PFLU_RS09780	0.20	+1.8
2,155,528	+		PFLU_RS09780	0.20	+1.2
2,155,529	-		PFLU_RS09780	0.20	+0.6
2,155,529	-		PFLU_RS09780	0.20	+1.7
2,155,529	-		PFLU_RS09780	0.20	-0.4
2,155,529	-		PFLU_RS09780	0.20	+0.9
2,155,529	-		PFLU_RS09780	0.20	-0.4
2,155,529	-		PFLU_RS09780	0.20	+0.8
2,155,529	-		PFLU_RS09780	0.20	+2.1
2,155,529	-		PFLU_RS09780	0.20	-0.9
2,155,530	+		PFLU_RS09780	0.21	+0.0
2,155,530	+		PFLU_RS09780	0.21	-0.2
2,155,530	+		PFLU_RS09780	0.21	-0.1
2,155,530	+		PFLU_RS09780	0.21	-1.9
2,155,530	+		PFLU_RS09780	0.21	-1.4
2,155,530	+		PFLU_RS09780	0.21	-0.9
2,155,531	-		PFLU_RS09780	0.21	+3.0
2,155,531	-		PFLU_RS09780	0.21	-2.2
2,155,531	-		PFLU_RS09780	0.21	+0.5
2,155,531	-		PFLU_RS09780	0.21	+1.7
2,155,531	-		PFLU_RS09780	0.21	+1.8
2,155,531	-		PFLU_RS09780	0.21	-1.1
2,155,531	-		PFLU_RS09780	0.21	+0.2
2,155,531	-		PFLU_RS09780	0.21	-0.1
2,155,531	-		PFLU_RS09780	0.21	-1.2
2,155,531	-		PFLU_RS09780	0.21	+2.1
2,155,531	-		PFLU_RS09780	0.21	-1.5
2,155,539	+		PFLU_RS09780	0.21	-1.4
2,155,550	+		PFLU_RS09780	0.23	-1.2
2,155,551	-		PFLU_RS09780	0.23	+0.6
2,155,551	-		PFLU_RS09780	0.23	-2.1
2,155,551	-		PFLU_RS09780	0.23	-2.7
2,155,656	-		PFLU_RS09780	0.34	+0.7
2,155,656	-		PFLU_RS09780	0.34	-1.8
2,155,664	+		PFLU_RS09780	0.35	-0.2
2,155,664	+		PFLU_RS09780	0.35	-1.5
2,155,665	-		PFLU_RS09780	0.35	+0.1
2,155,665	-		PFLU_RS09780	0.35	-0.2
2,155,665	-		PFLU_RS09780	0.35	-2.3
2,155,732	+		PFLU_RS09780	0.42	+0.1
2,155,732	+		PFLU_RS09780	0.42	-0.1
2,155,732	+		PFLU_RS09780	0.42	+0.7
2,155,732	+		PFLU_RS09780	0.42	+2.1
2,155,732	+		PFLU_RS09780	0.42	+0.6
2,155,732	+		PFLU_RS09780	0.42	+1.2
2,155,732	+		PFLU_RS09780	0.42	-1.5
2,155,732	+		PFLU_RS09780	0.42	+0.2
2,155,732	+		PFLU_RS09780	0.42	-0.4
2,155,732	+		PFLU_RS09780	0.42	-0.9
2,155,732	+		PFLU_RS09780	0.42	+1.8
2,155,732	+		PFLU_RS09780	0.42	+0.5
2,155,732	+		PFLU_RS09780	0.42	-1.2
2,155,732	+		PFLU_RS09780	0.42	+0.5
2,155,732	+		PFLU_RS09780	0.42	-1.6
2,155,732	+		PFLU_RS09780	0.42	+1.1
2,155,732	+		PFLU_RS09780	0.42	+0.9
2,155,733	-		PFLU_RS09780	0.43	+2.5
2,155,733	-		PFLU_RS09780	0.43	+0.7
2,155,733	-		PFLU_RS09780	0.43	+0.1
2,155,733	-		PFLU_RS09780	0.43	+0.4
2,155,733	-		PFLU_RS09780	0.43	+0.7
2,155,733	-		PFLU_RS09780	0.43	-1.3
2,155,733	-		PFLU_RS09780	0.43	+1.5
2,155,733	-		PFLU_RS09780	0.43	+1.4
2,155,733	-		PFLU_RS09780	0.43	+1.3
2,155,733	-		PFLU_RS09780	0.43	+0.3
2,155,733	-		PFLU_RS09780	0.43	-0.9
2,155,733	-		PFLU_RS09780	0.43	-0.7
2,155,733	-		PFLU_RS09780	0.43	-1.5
2,155,733	-		PFLU_RS09780	0.43	-1.6
2,155,733	-		PFLU_RS09780	0.43	-2.8
2,155,733	-		PFLU_RS09780	0.43	+0.9
2,155,733	-		PFLU_RS09780	0.43	+0.5
2,155,736	+		PFLU_RS09780	0.43	+1.1
2,155,737	-		PFLU_RS09780	0.43	+1.8
2,155,737	-		PFLU_RS09780	0.43	-0.1
2,155,737	-		PFLU_RS09780	0.43	+0.8
2,155,810	+		PFLU_RS09780	0.51	-0.9
2,155,810	+		PFLU_RS09780	0.51	+2.4
2,155,810	+		PFLU_RS09780	0.51	-1.2
2,155,810	+		PFLU_RS09780	0.51	-1.8
2,155,810	+		PFLU_RS09780	0.51	+2.9
2,155,810	+		PFLU_RS09780	0.51	+1.4
2,155,810	+		PFLU_RS09780	0.51	-0.5
2,155,811	-		PFLU_RS09780	0.51	-0.5
2,155,811	-		PFLU_RS09780	0.51	-3.3
2,155,811	-		PFLU_RS09780	0.51	-1.7
2,155,811	-		PFLU_RS09780	0.51	+1.0
2,155,818	-		PFLU_RS09780	0.52	+1.4
2,155,818	-		PFLU_RS09780	0.52	-0.2
2,155,848	+		PFLU_RS09780	0.55	+0.9
2,155,848	+		PFLU_RS09780	0.55	+0.4
2,155,849	-		PFLU_RS09780	0.55	+0.9
2,155,849	-		PFLU_RS09780	0.55	+2.0
2,155,859	+		PFLU_RS09780	0.56	-0.5
2,155,859	+		PFLU_RS09780	0.56	+1.8
2,155,874	+		PFLU_RS09780	0.58	+0.8
2,155,875	-		PFLU_RS09780	0.58	-0.4
2,155,939	+		PFLU_RS09780	0.65	-3.2
2,155,939	+		PFLU_RS09780	0.65	+1.4
2,156,029	+		PFLU_RS09780	0.75	-1.2
2,156,029	+		PFLU_RS09780	0.75	+1.4
2,156,029	+		PFLU_RS09780	0.75	-1.5
2,156,029	+		PFLU_RS09780	0.75	-1.4
2,156,029	+		PFLU_RS09780	0.75	-0.2
2,156,029	+		PFLU_RS09780	0.75	+2.8
2,156,029	+		PFLU_RS09780	0.75	+0.1
2,156,030	-		PFLU_RS09780	0.75	-1.1
2,156,030	-		PFLU_RS09780	0.75	+0.8
2,156,030	-		PFLU_RS09780	0.75	-2.6
2,156,030	-		PFLU_RS09780	0.75	+1.7
2,156,071	+		PFLU_RS09780	0.79	-0.0
2,156,071	+		PFLU_RS09780	0.79	+3.4
2,156,071	+		PFLU_RS09780	0.79	-0.9
2,156,101	+		PFLU_RS09780	0.83	-0.7
2,156,101	+		PFLU_RS09780	0.83	-0.2
2,156,101	+		PFLU_RS09780	0.83	-1.8
2,156,101	+		PFLU_RS09780	0.83	-1.9
2,156,102	-		PFLU_RS09780	0.83	+2.7
2,156,102	-		PFLU_RS09780	0.83	+0.2
2,156,102	-		PFLU_RS09780	0.83	-2.2
2,156,132	+		PFLU_RS09780	0.86	-2.2
2,156,132	+		PFLU_RS09780	0.86	-2.0
2,156,132	+		PFLU_RS09780	0.86	+0.1
2,156,175	-				-0.2
2,156,175	-				+0.4
2,156,194	+				-0.9
2,156,194	+				-0.2
2,156,195	-				-0.5
2,156,206	+				+0.1
2,156,207	-				-2.5
2,156,239	+				-0.9
2,156,240	-				+0.8
2,156,240	-				+0.1
2,156,304	+				-2.0
2,156,304	+				-1.5
2,156,304	+				+0.3
2,156,304	+				-0.1
2,156,304	+				+1.3
2,156,304	+				+2.3
2,156,304	+				+2.1
2,156,304	+				+0.7
2,156,304	+				-1.1
2,156,304	+				-1.1
2,156,304	+				-0.9
2,156,305	-				-0.1
2,156,305	-				+0.0
2,156,305	-				+2.5
2,156,305	-				+0.5
2,156,305	-				+1.7
2,156,305	-				-0.9
2,156,305	-				-1.7
2,156,305	-				+0.7
2,156,305	-				-0.9
2,156,348	+				-1.6
2,156,348	+				+0.4
2,156,348	+				-0.2
2,156,348	+				+3.0
2,156,361	+				+0.7
2,156,361	+				-0.7
2,156,361	+				-3.2
2,156,361	+				+0.5
2,156,361	+				-1.7
2,156,361	+				-0.4
2,156,361	+				-2.2
2,156,362	-				+1.4
2,156,362	-				+1.3
2,156,362	-				-2.4
2,156,362	-				-3.2
2,156,362	-				+0.1
2,156,362	-				+0.3
2,156,362	-				+1.0
2,156,362	-				-0.7
2,156,362	-				+0.1
2,156,417	+		PFLU_RS30585	0.14	+0.4
2,156,417	+		PFLU_RS30585	0.14	+0.5
2,156,417	+		PFLU_RS30585	0.14	-0.2
2,156,417	+		PFLU_RS30585	0.14	+1.3
2,156,448	+		PFLU_RS30585	0.17	+0.0
2,156,454	+		PFLU_RS30585	0.17	-1.2
2,156,454	+		PFLU_RS30585	0.17	+0.1
2,156,454	+		PFLU_RS30585	0.17	+0.0
2,156,455	-		PFLU_RS30585	0.17	-0.7
2,156,474	+		PFLU_RS30585	0.19	-0.0
2,156,474	+		PFLU_RS30585	0.19	+0.7
2,156,474	+		PFLU_RS30585	0.19	-1.9
2,156,474	+		PFLU_RS30585	0.19	+3.8
2,156,475	-		PFLU_RS30585	0.19	-1.2
2,156,475	-		PFLU_RS30585	0.19	-0.9
2,156,475	-		PFLU_RS30585	0.19	+2.1
2,156,475	-		PFLU_RS30585	0.19	+1.3
2,156,475	-		PFLU_RS30585	0.19	+2.1
2,156,475	-		PFLU_RS30585	0.19	+1.0
2,156,475	-		PFLU_RS30585	0.19	-0.1
2,156,508	+		PFLU_RS30585	0.22	+0.2
2,156,565	+		PFLU_RS30585	0.26	+2.1
2,156,565	+		PFLU_RS30585	0.26	+1.0
2,156,565	+		PFLU_RS30585	0.26	-0.2
2,156,565	+		PFLU_RS30585	0.26	-0.7
2,156,565	+		PFLU_RS30585	0.26	-0.1
2,156,565	+		PFLU_RS30585	0.26	+2.5
2,156,571	+		PFLU_RS30585	0.27	+1.2
2,156,572	-		PFLU_RS30585	0.27	+0.4
2,156,572	-		PFLU_RS30585	0.27	+2.6
2,156,572	-		PFLU_RS30585	0.27	+1.0
2,156,572	-		PFLU_RS30585	0.27	+0.2
2,156,615	+		PFLU_RS30585	0.31	-0.4
2,156,615	+		PFLU_RS30585	0.31	-2.1
2,156,616	-		PFLU_RS30585	0.31	+1.0
2,156,616	-		PFLU_RS30585	0.31	+1.0
2,156,635	+		PFLU_RS30585	0.32	-2.6
2,156,637	+		PFLU_RS30585	0.32	+1.0
2,156,637	+		PFLU_RS30585	0.32	+0.5
2,156,638	-		PFLU_RS30585	0.33	-0.8
2,156,638	-		PFLU_RS30585	0.33	-0.7
2,156,638	-		PFLU_RS30585	0.33	-0.2
2,156,638	-		PFLU_RS30585	0.33	-0.0
2,156,721	+		PFLU_RS30585	0.40	-2.2
2,156,721	+		PFLU_RS30585	0.40	-2.2
2,156,721	+		PFLU_RS30585	0.40	+2.7
2,156,721	+		PFLU_RS30585	0.40	+0.4
2,156,721	+		PFLU_RS30585	0.40	-0.5
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