Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06715

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,500,031	+				+1.9
1,500,031	+				+0.4
1,500,032	-				+1.8
1,500,032	-				+1.0
1,500,032	-				-0.9
1,500,032	-				+5.5
1,500,032	-				-0.6
1,500,032	-				+1.3
1,500,036	-				-0.7
1,500,036	-				+2.3
1,500,170	-				+4.7
1,500,179	+				+0.7
1,500,180	-				+3.6
1,500,180	-				+0.0
1,500,185	+				+1.7
1,500,185	+				+0.3
1,500,214	+				+1.1
1,500,214	+				-1.0
1,500,218	+				+0.9
1,500,218	+				-2.1
1,500,267	+				+0.8
1,500,384	+		PFLU_RS06710	0.59	+1.4
1,500,384	+		PFLU_RS06710	0.59	+0.6
1,500,384	+		PFLU_RS06710	0.59	+0.4
1,500,385	-		PFLU_RS06710	0.59	+0.6
1,500,385	-		PFLU_RS06710	0.59	-1.6
1,500,417	+		PFLU_RS06710	0.75	-0.6
1,500,417	+		PFLU_RS06710	0.75	+1.0
1,500,417	+		PFLU_RS06710	0.75	+0.8
1,500,417	+		PFLU_RS06710	0.75	-2.2
1,500,417	+		PFLU_RS06710	0.75	+1.7
1,500,417	+		PFLU_RS06710	0.75	+0.9
1,500,417	+		PFLU_RS06710	0.75	-3.0
1,500,418	-		PFLU_RS06710	0.76	-0.9
1,500,418	-		PFLU_RS06710	0.76	-1.2
1,500,418	-		PFLU_RS06710	0.76	+1.3
1,500,418	-		PFLU_RS06710	0.76	-2.2
1,500,418	-		PFLU_RS06710	0.76	-1.1
1,500,418	-		PFLU_RS06710	0.76	+3.1
1,500,473	-				+0.1
1,500,476	+				-1.0
1,500,477	-				+0.0
1,500,477	-				-1.0
1,500,477	-				+0.1
1,500,477	-				+0.9
1,500,477	-				+0.1
1,500,477	-				+2.1
1,500,477	-				-1.2
1,500,492	-				+0.9
1,500,492	-				+0.7
1,500,492	-				+0.9
1,500,495	+				+3.1
1,500,495	+				-1.1
1,500,496	-				+2.3
1,500,590	+				-1.0
1,500,612	+				+0.7
1,500,612	+				-0.6
1,500,612	+				+0.7
1,500,612	+				-2.1
1,500,613	-				-0.4
1,500,613	-				+1.0
1,500,613	-				+0.3
1,500,613	-				+1.9
1,500,613	-				+1.3
1,500,613	-				-0.1
1,500,613	-				-0.6
1,500,648	+				-2.0
1,500,648	+				-0.7
1,500,649	-				+0.2
1,500,649	-				+2.3
1,500,672	+				-1.4
1,500,672	+				-1.6
1,500,672	+				+0.2
1,500,673	-				-1.2
1,500,693	+				+0.8
1,500,693	+				-0.3
1,500,694	-				+4.1
1,500,703	+				+1.0
1,500,704	-				-0.9
1,500,704	-				+0.4
1,500,705	+				-0.3
1,500,705	+				-2.4
1,500,705	+				+0.7
1,500,705	+				-0.2
1,500,706	-				-1.3
1,500,735	+				+0.4
1,500,736	-				+0.7
1,500,736	-				+2.3
1,500,773	+				+0.9
1,500,812	+				-1.0
1,500,812	+				-1.7
1,500,823	+				-0.8
1,500,823	+				-0.3
1,500,823	+				-0.2
1,500,824	-				+1.2
1,500,824	-				+1.5
1,500,824	-				-0.1
1,500,836	+				-1.9
1,500,836	+				-0.6
1,500,836	+				-2.3
1,500,836	+				-1.9
1,500,836	+				+0.5
1,500,836	+				+0.9
1,500,836	+				+2.6
1,500,836	+				-0.0
1,500,836	+				-0.3
1,500,836	+				+1.8
1,500,837	-				+0.8
1,500,837	-				-2.7
1,500,837	-				+1.1
1,500,837	-				+1.0
1,500,837	-				+1.5
1,500,837	-				+0.7
1,500,853	+				+1.0
1,500,853	+				-2.7
1,500,853	+				-1.1
1,500,853	+				-0.5
1,500,854	-				+1.9
1,500,854	-				-2.1
1,500,880	+				-2.2
1,500,881	-				-0.6
1,500,881	-				+3.7
1,500,978	+				-0.0
1,500,978	+				-0.6
1,500,978	+				-0.6
1,500,978	+				+2.4
1,500,978	+				+0.2
1,500,978	+				+0.7
1,500,978	+				-0.4
1,500,978	+				-0.4
1,500,978	+				+0.3
1,500,978	+				-0.6
1,500,979	-				+0.3
1,500,979	-				+0.9
1,500,979	-				+0.2
1,500,979	-				-0.3
1,500,979	-				-0.8
1,500,979	-				-1.8
1,500,979	-				+0.6
1,500,979	-				+1.3
1,500,979	-				-0.3
1,500,979	-				+2.7
1,500,979	-				-1.0
1,500,981	+				+0.2
1,500,981	+				+0.0
1,500,981	+				+2.0
1,500,982	-				-1.6
1,500,982	-				-0.2
1,500,982	-				-1.5
1,500,982	-				-1.7
1,500,989	+				-2.9
1,500,989	+				-0.1
1,500,989	+				-1.8
1,500,989	+				-2.2
1,500,990	-				+0.7
1,500,990	-				+2.1
1,500,990	-				+1.2
1,500,990	-				-1.0
1,500,990	-				+0.7
1,501,011	+				-1.3
1,501,011	+				+0.7
1,501,011	+				-0.7
1,501,011	+				-1.3
1,501,012	-				-0.7
1,501,012	-				+1.0
1,501,012	-				+1.7
1,501,012	-				-0.4
1,501,012	-				+0.3
1,501,297	+		PFLU_RS06715	0.32	+0.4
1,501,297	+		PFLU_RS06715	0.32	-2.2
1,501,297	+		PFLU_RS06715	0.32	-1.9
1,501,298	-		PFLU_RS06715	0.32	-1.0
1,501,298	-		PFLU_RS06715	0.32	+1.4
1,501,298	-		PFLU_RS06715	0.32	+0.7
1,501,304	+		PFLU_RS06715	0.33	-0.4
1,501,336	+		PFLU_RS06715	0.36	-1.6
1,501,336	+		PFLU_RS06715	0.36	+0.7
1,501,336	+		PFLU_RS06715	0.36	+1.2
1,501,337	-		PFLU_RS06715	0.36	+1.0
1,501,337	-		PFLU_RS06715	0.36	+1.1
1,501,375	+		PFLU_RS06715	0.41	+2.5
1,501,447	+		PFLU_RS06715	0.49	+1.5
1,501,447	+		PFLU_RS06715	0.49	-1.0
1,501,447	+		PFLU_RS06715	0.49	+0.2
1,501,447	+		PFLU_RS06715	0.49	+0.0
1,501,447	+		PFLU_RS06715	0.49	+1.5
1,501,447	+		PFLU_RS06715	0.49	-1.3
1,501,447	+		PFLU_RS06715	0.49	-0.0
1,501,447	+		PFLU_RS06715	0.49	+2.0
1,501,447	+		PFLU_RS06715	0.49	+4.7
1,501,447	+		PFLU_RS06715	0.49	+1.1
1,501,447	+		PFLU_RS06715	0.49	+0.2
1,501,447	+		PFLU_RS06715	0.49	-2.5
1,501,447	+		PFLU_RS06715	0.49	+0.4
1,501,447	-		PFLU_RS06715	0.49	-0.5
1,501,448	-		PFLU_RS06715	0.50	+1.1
1,501,448	-		PFLU_RS06715	0.50	+1.3
1,501,448	-		PFLU_RS06715	0.50	-1.2
1,501,448	-		PFLU_RS06715	0.50	-2.9
1,501,448	-		PFLU_RS06715	0.50	+1.2
1,501,448	-		PFLU_RS06715	0.50	+0.6
1,501,519	+		PFLU_RS06715	0.58	-1.3
1,501,520	-		PFLU_RS06715	0.58	-2.0
1,501,520	-		PFLU_RS06715	0.58	-0.8
1,501,520	-		PFLU_RS06715	0.58	+1.8
1,501,579	+		PFLU_RS06715	0.65	-1.2
1,501,579	+		PFLU_RS06715	0.65	-1.2
1,501,580	-		PFLU_RS06715	0.65	+0.2
1,501,580	-		PFLU_RS06715	0.65	-0.7
1,501,732	+		PFLU_RS06715	0.83	+1.2
1,501,871	-				+1.2
1,501,930	+				-1.3
1,501,930	+				+0.2
1,501,930	+				-0.5
1,501,930	+				+2.3
1,501,931	-				+0.7
1,501,931	-				-0.0
1,501,931	-				-1.4
1,501,931	-				-1.7
1,501,931	-				+1.1
1,501,931	-				-0.6
1,501,933	+				+1.4
1,501,933	+				-0.6
1,501,933	+				-1.7
1,501,933	+				-2.0
1,501,933	+				+0.6
1,501,934	-				-0.8
1,501,934	-				+1.0
1,501,934	-				+2.2
1,501,934	-				+0.1
1,501,934	-				-0.0
1,501,934	-				+0.2
1,501,934	-				-0.2
1,501,934	-				+0.5
1,501,965	+				-0.2
1,501,966	-				-1.3
1,501,969	-				-1.3
1,501,969	-				-1.3
1,502,011	-				-0.1
1,502,011	-				+1.0
1,502,017	-				+2.8
1,502,069	-				+0.3
1,502,161	+		PFLU_RS06720	0.11	-1.9
1,502,349	-		PFLU_RS06720	0.25	+0.5
1,502,349	-		PFLU_RS06720	0.25	+0.6
1,502,444	+		PFLU_RS06720	0.32	+1.8
1,502,444	+		PFLU_RS06720	0.32	+0.9
1,502,444	+		PFLU_RS06720	0.32	-2.0
1,502,444	+		PFLU_RS06720	0.32	-1.8
1,502,444	+		PFLU_RS06720	0.32	-1.3
1,502,444	+		PFLU_RS06720	0.32	+1.4
1,502,444	+		PFLU_RS06720	0.32	+1.1
1,502,445	-		PFLU_RS06720	0.32	-0.9
1,502,445	-		PFLU_RS06720	0.32	+0.8
1,502,640	-		PFLU_RS06720	0.46	+0.4
1,502,766	+		PFLU_RS06720	0.56	-2.2
1,502,767	-		PFLU_RS06720	0.56	-0.8
1,502,767	-		PFLU_RS06720	0.56	+2.1
1,502,767	-		PFLU_RS06720	0.56	-0.7
1,502,789	-		PFLU_RS06720	0.57	+1.4
1,502,792	+		PFLU_RS06720	0.58	-1.0
1,502,792	+		PFLU_RS06720	0.58	+0.5
1,502,792	+		PFLU_RS06720	0.58	-3.1
1,502,792	+		PFLU_RS06720	0.58	-2.3
1,502,792	+		PFLU_RS06720	0.58	-0.8
1,502,792	+		PFLU_RS06720	0.58	+0.7
1,502,792	+		PFLU_RS06720	0.58	+1.1
1,502,792	+		PFLU_RS06720	0.58	+1.2
1,502,792	+		PFLU_RS06720	0.58	+2.0
1,502,792	+		PFLU_RS06720	0.58	+0.1
1,502,792	+		PFLU_RS06720	0.58	+0.0
1,502,792	+		PFLU_RS06720	0.58	-0.4
1,502,792	+		PFLU_RS06720	0.58	+1.6
1,502,792	+		PFLU_RS06720	0.58	+0.1
1,502,792	+		PFLU_RS06720	0.58	+0.0
1,502,792	+		PFLU_RS06720	0.58	+0.9
1,502,793	-		PFLU_RS06720	0.58	+1.5
1,502,793	-		PFLU_RS06720	0.58	+0.6
1,502,793	-		PFLU_RS06720	0.58	+1.0
1,502,793	-		PFLU_RS06720	0.58	-1.3
1,502,793	-		PFLU_RS06720	0.58	-1.6
1,502,793	-		PFLU_RS06720	0.58	+2.0
1,502,793	-		PFLU_RS06720	0.58	-1.1
1,502,793	-		PFLU_RS06720	0.58	-1.2
1,502,793	-		PFLU_RS06720	0.58	+1.0
1,502,793	-		PFLU_RS06720	0.58	-0.5
1,502,793	-		PFLU_RS06720	0.58	-1.3
1,502,793	-		PFLU_RS06720	0.58	-0.2
1,502,825	+		PFLU_RS06720	0.60	-1.5
1,502,825	+		PFLU_RS06720	0.60	-1.5
1,502,825	+		PFLU_RS06720	0.60	-0.8
1,502,825	+		PFLU_RS06720	0.60	-1.4
1,502,825	+		PFLU_RS06720	0.60	-0.0
1,502,826	-		PFLU_RS06720	0.60	+1.2
1,502,826	-		PFLU_RS06720	0.60	-0.1
1,502,826	-		PFLU_RS06720	0.60	+1.2
1,502,826	-		PFLU_RS06720	0.60	-0.5
1,502,826	-		PFLU_RS06720	0.60	-0.7
1,502,826	-		PFLU_RS06720	0.60	-3.3
1,502,826	-		PFLU_RS06720	0.60	+0.5
1,502,826	-		PFLU_RS06720	0.60	-0.4
1,502,826	-		PFLU_RS06720	0.60	-0.3
1,502,850	-		PFLU_RS06720	0.62	-2.5