Strain Fitness in Pseudomonas sp. S08-1 around OH686_18480

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,836,903	+		OH686_18470	0.63	-0.1
3,836,903	+		OH686_18470	0.63	-1.2
3,836,903	+		OH686_18470	0.63	+0.5
3,836,903	+		OH686_18470	0.63	-0.3
3,836,903	+		OH686_18470	0.63	+0.1
3,836,903	+		OH686_18470	0.63	-1.1
3,836,903	+		OH686_18470	0.63	+0.5
3,836,903	+		OH686_18470	0.63	+0.6
3,836,904	-		OH686_18470	0.63	+0.2
3,836,904	-		OH686_18470	0.63	+1.2
3,836,904	-		OH686_18470	0.63	-0.6
3,836,904	-		OH686_18470	0.63	-0.5
3,836,904	-		OH686_18470	0.63	+0.6
3,836,904	-		OH686_18470	0.63	-0.3
3,836,904	-		OH686_18470	0.63	+0.3
3,837,050	+		OH686_18470	0.79	-1.0
3,837,050	+		OH686_18470	0.79	-2.1
3,837,050	+		OH686_18470	0.79	-0.5
3,837,051	-		OH686_18470	0.79	-0.6
3,837,051	-		OH686_18470	0.79	-1.4
3,837,051	-		OH686_18470	0.79	+0.4
3,837,051	-		OH686_18470	0.79	+0.1
3,837,053	+		OH686_18470	0.79	-0.1
3,837,054	-		OH686_18470	0.79	+0.2
3,837,054	-		OH686_18470	0.79	-0.3
3,837,054	-		OH686_18470	0.79	-0.5
3,837,054	-		OH686_18470	0.79	+0.3
3,837,054	-		OH686_18470	0.79	+0.7
3,837,271	-				+0.6
3,837,271	-				-0.2
3,837,333	+				+1.2
3,837,333	+				+0.1
3,837,333	+				+1.1
3,837,333	+				-0.1
3,837,333	+				+0.6
3,837,333	+				+0.6
3,837,333	+				+1.0
3,837,333	+				+1.2
3,837,334	-				-0.5
3,837,334	-				-1.7
3,837,334	-				-0.1
3,837,334	-				-0.3
3,837,334	-				+0.1
3,837,334	-				-0.2
3,837,334	-				-1.5
3,837,334	-				-1.1
3,837,334	-				-1.1
3,837,334	-				+1.2
3,837,334	-				+0.2
3,837,334	-				-0.2
3,837,334	-				-0.1
3,837,334	-				+0.3
3,837,381	+				+0.0
3,837,381	+				+0.0
3,837,381	+				-1.2
3,837,382	-				+0.8
3,837,382	-				+1.1
3,837,435	+		OH686_18475	0.12	+0.2
3,837,435	+		OH686_18475	0.12	-0.2
3,837,436	-		OH686_18475	0.12	-0.4
3,837,436	-		OH686_18475	0.12	-0.4
3,837,450	+		OH686_18475	0.16	-1.0
3,837,451	-		OH686_18475	0.16	-0.8
3,837,499	+		OH686_18475	0.28	+0.1
3,837,499	+		OH686_18475	0.28	-0.7
3,837,499	+		OH686_18475	0.28	-0.1
3,837,499	+		OH686_18475	0.28	+0.6
3,837,499	+		OH686_18475	0.28	-0.9
3,837,499	+		OH686_18475	0.28	-1.3
3,837,500	-		OH686_18475	0.29	+0.2
3,837,500	-		OH686_18475	0.29	+0.2
3,837,500	-		OH686_18475	0.29	-1.0
3,837,500	-		OH686_18475	0.29	-0.3
3,837,568	+		OH686_18475	0.46	+0.4
3,837,568	+		OH686_18475	0.46	+0.2
3,837,568	+		OH686_18475	0.46	+0.1
3,837,568	+		OH686_18475	0.46	+0.1
3,837,568	+		OH686_18475	0.46	+0.7
3,837,568	+		OH686_18475	0.46	+1.4
3,837,568	+		OH686_18475	0.46	+0.9
3,837,568	+		OH686_18475	0.46	+0.2
3,837,569	-		OH686_18475	0.46	+0.7
3,837,569	-		OH686_18475	0.46	-2.4
3,837,569	-		OH686_18475	0.46	-0.4
3,837,569	-		OH686_18475	0.46	-0.1
3,837,670	+		OH686_18475	0.71	+0.2
3,837,671	-		OH686_18475	0.72	+0.5
3,837,671	-		OH686_18475	0.72	+1.8
3,837,681	+		OH686_18475	0.74	-1.3
3,837,682	-		OH686_18475	0.74	+0.0
3,837,682	-		OH686_18475	0.74	+0.7
3,837,780	+				+0.1
3,837,780	+				+0.1
3,837,780	+				-0.4
3,837,850	-				-1.7
3,837,884	+				-0.3
3,837,884	+				+0.3
3,837,884	+				-1.7
3,837,885	-				+1.5
3,837,885	-				-0.9
3,837,885	-				+0.3
3,837,885	-				-1.7
3,837,885	-				-0.2
3,837,885	-				-0.1
3,837,934	-		OH686_18480	0.12	-0.3
3,838,244	+		OH686_18480	0.61	+0.0
3,838,244	+		OH686_18480	0.61	-1.4
3,838,244	+		OH686_18480	0.61	-0.2
3,838,244	+		OH686_18480	0.61	+0.3
3,838,244	+		OH686_18480	0.61	+0.7
3,838,244	+		OH686_18480	0.61	-0.1
3,838,244	+		OH686_18480	0.61	-0.5
3,838,244	+		OH686_18480	0.61	+0.2
3,838,244	+		OH686_18480	0.61	-0.3
3,838,244	+		OH686_18480	0.61	+0.1
3,838,244	+		OH686_18480	0.61	-0.3
3,838,244	+		OH686_18480	0.61	+0.7
3,838,244	+		OH686_18480	0.61	-2.1
3,838,244	+		OH686_18480	0.61	+0.3
3,838,245	-		OH686_18480	0.61	-1.7
3,838,245	-		OH686_18480	0.61	-0.7
3,838,245	-		OH686_18480	0.61	+0.2
3,838,245	-		OH686_18480	0.61	+0.4
3,838,245	-		OH686_18480	0.61	+0.1
3,838,245	-		OH686_18480	0.61	-1.4
3,838,245	-		OH686_18480	0.61	+0.1
3,838,245	-		OH686_18480	0.61	-0.0
3,838,245	-		OH686_18480	0.61	-0.9
3,838,452	+				-1.1
3,838,452	+				+0.0
3,838,453	-				-2.1
3,838,453	-				+0.0
3,838,472	+				-0.5
3,838,472	+				+0.9
3,838,472	+				-0.1
3,838,472	+				+1.1
3,838,472	+				+0.6
3,838,472	+				+0.3
3,838,472	+				-0.7
3,838,472	+				+0.1
3,838,472	+				-0.4
3,838,472	+				+2.6
3,838,472	+				+0.1
3,838,472	+				-0.9
3,838,472	+				+1.3
3,838,473	-				-0.7
3,838,473	-				-0.8
3,838,473	-				+0.8
3,838,473	-				+0.8
3,838,473	-				-0.3
3,838,473	-				+0.3
3,838,473	-				+0.9
3,838,473	-				-0.6
3,838,473	-				-0.3
3,838,473	-				-0.5
3,838,485	+				-0.6
3,838,485	+				-0.4
3,838,485	+				-0.0
3,838,485	+				+0.2
3,838,485	+				+0.9
3,838,485	+				+0.4
3,838,485	+				-0.4
3,838,485	+				-0.1
3,838,485	+				-0.1
3,838,485	+				+0.3
3,838,486	-				-0.4
3,838,486	-				-0.2
3,838,486	-				+1.9
3,838,486	-				-0.2
3,838,486	-				-0.6
3,838,486	-				+0.3
3,838,486	-				+0.2
3,838,486	-				-0.9
3,838,486	-				-0.2
3,838,486	-				+0.1
3,838,486	-				+0.3
3,838,583	+				+0.1
3,838,606	+				+0.0
3,838,606	+				+1.4
3,838,606	+				+1.2
3,838,606	+				-0.7
3,838,606	+				+0.1
3,838,606	+				-1.0
3,838,606	+				-0.5
3,838,607	-				-0.9
3,838,607	-				+1.7
3,838,607	-				+0.5
3,838,607	-				+1.5
3,838,627	-				+0.1
3,838,635	-				+0.0
3,838,671	+				-0.2
3,838,671	+				+0.0
3,838,671	+				-0.6
3,838,671	+				+0.1
3,838,671	+				-0.8
3,838,672	-				-0.1
3,838,672	-				-0.2
3,838,672	-				+1.0
3,838,672	-				+1.2
3,838,672	-				+1.0
3,838,672	-				+0.0
3,838,674	+				+0.6
3,838,674	+				-0.1
3,838,674	+				+0.4
3,838,674	+				+1.8
3,838,674	+				+0.2
3,838,674	+				-0.4
3,838,674	+				+0.8
3,838,674	+				+0.3
3,838,674	+				+0.2
3,838,674	+				+1.8
3,838,674	+				+0.5
3,838,675	-				-0.8
3,838,675	-				+0.4
3,838,675	-				+0.6
3,838,675	-				+0.7
3,838,675	-				-0.1
3,838,675	-				+0.2
3,838,675	-				-1.4
3,838,675	-				+0.3
3,838,842	+		OH686_18485	0.21	+0.6
3,838,842	+		OH686_18485	0.21	-0.5
3,838,842	+		OH686_18485	0.21	-0.3
3,838,842	+		OH686_18485	0.21	+0.6
3,838,842	+		OH686_18485	0.21	-1.0
3,838,842	+		OH686_18485	0.21	-1.2
3,838,842	+		OH686_18485	0.21	+0.9
3,838,842	+		OH686_18485	0.21	+0.4
3,838,843	-		OH686_18485	0.21	+0.3
3,838,843	-		OH686_18485	0.21	-0.5
3,838,843	-		OH686_18485	0.21	+0.1
3,838,843	-		OH686_18485	0.21	-0.1
3,838,846	-		OH686_18485	0.22	-0.5
3,838,930	+		OH686_18485	0.31	-0.3
3,838,931	-		OH686_18485	0.31	-0.9
3,838,931	-		OH686_18485	0.31	-0.3
3,838,989	+		OH686_18485	0.38	-0.7
3,838,989	+		OH686_18485	0.38	-1.1
3,838,989	+		OH686_18485	0.38	-1.2
3,838,989	+		OH686_18485	0.38	-0.3
3,838,989	+		OH686_18485	0.38	-1.3
3,838,989	+		OH686_18485	0.38	+0.2
3,838,990	-		OH686_18485	0.38	-0.8
3,838,990	-		OH686_18485	0.38	+0.9
3,838,990	-		OH686_18485	0.38	-0.5
3,838,990	-		OH686_18485	0.38	+0.7
3,838,990	-		OH686_18485	0.38	+0.3
3,839,019	+		OH686_18485	0.41	+0.7
3,839,019	+		OH686_18485	0.41	-0.0
3,839,019	+		OH686_18485	0.41	-0.7
3,839,019	+		OH686_18485	0.41	+0.5
3,839,019	+		OH686_18485	0.41	-1.9
3,839,019	+		OH686_18485	0.41	-0.2
3,839,019	+		OH686_18485	0.41	+0.3
3,839,019	+		OH686_18485	0.41	-0.5
3,839,020	-		OH686_18485	0.41	-0.2
3,839,020	-		OH686_18485	0.41	+1.1
3,839,020	-		OH686_18485	0.41	-0.5
3,839,020	-		OH686_18485	0.41	-1.7
3,839,020	-		OH686_18485	0.41	-0.1
3,839,020	-		OH686_18485	0.41	-0.3
3,839,020	-		OH686_18485	0.41	+0.3
3,839,020	-		OH686_18485	0.41	-0.2
3,839,020	-		OH686_18485	0.41	+0.2
3,839,020	-		OH686_18485	0.41	+0.8
3,839,020	-		OH686_18485	0.41	+1.4
3,839,020	-		OH686_18485	0.41	-0.2
3,839,020	-		OH686_18485	0.41	+0.9
3,839,250	+		OH686_18485	0.66	+1.6
3,839,251	-		OH686_18485	0.67	+0.2