Strain Fitness in Pseudomonas simiae WCS417 around PS417_00450

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
88,296	-		PS417_00445	0.49	-0.4
88,428	-		PS417_00445	0.56	-0.6
88,428	-		PS417_00445	0.56	-0.6
88,962	+		PS417_00445	0.86	+0.5
88,962	+		PS417_00445	0.86	+0.4
88,963	-				+1.4
89,068	+				+0.4
89,173	+				-0.4
89,174	-				-1.2
89,216	-				-0.5
89,216	-				+0.1
89,220	+				+0.3
89,220	+				-0.4
89,221	-				-0.3
89,221	-				+0.6
89,221	-				-0.2
89,236	+				+0.7
89,237	-				+0.9
89,319	+				+0.1
89,469	-		PS417_00450	0.18	-1.1
89,501	-		PS417_00450	0.20	+0.5
89,554	+		PS417_00450	0.24	-0.1
89,554	+		PS417_00450	0.24	+0.5
89,555	-		PS417_00450	0.24	-1.9
90,153	+		PS417_00450	0.69	+0.5
90,154	-		PS417_00450	0.69	+1.4
90,324	+		PS417_00450	0.82	-0.7
90,475	+				-0.2
90,475	+				-2.2
90,475	+				+1.2
90,476	-				-0.4
90,535	-				+0.1
90,589	-				-0.2
90,594	-				-0.0
90,594	-				-0.3
90,610	-				+1.4
90,643	-				-0.3
90,675	+				-0.1
90,675	+				-0.5
90,676	-				-0.0
90,676	-				-0.0
90,676	-				-0.6
90,692	-				-0.7
90,729	+				+0.7
90,730	-				-0.5
90,908	+				-1.1
90,908	+				-0.9
90,909	-				-0.1
90,925	-				+0.9
90,981	-		PS417_00455	0.11	+0.9
91,143	-		PS417_00455	0.68	-0.7
91,143	-		PS417_00455	0.68	+2.3
91,231	+				-0.1
91,232	-				+0.8
91,274	-				+2.0
91,283	-				-0.1
91,289	+				+0.1
91,289	+				-0.2
91,300	-				-0.0