Strain Fitness in Pseudomonas simiae WCS417 around PS417_27255

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
5,881,643	-		PS417_27245	0.72	-3.7
5,881,842	+		PS417_27245	0.89	-0.2
5,881,842	+		PS417_27245	0.89	-3.1
5,881,843	-		PS417_27245	0.89	-1.0
5,881,866	-				-3.9
5,882,023	+				+0.4
5,882,023	+				-0.4
5,882,024	-				-0.1
5,882,024	-				-1.5
5,882,116	-				-1.3
5,882,265	+		PS417_27250	0.45	-0.9
5,882,265	+		PS417_27250	0.45	-0.0
5,882,266	-		PS417_27250	0.45	-0.1
5,882,266	-		PS417_27250	0.45	+0.2
5,882,269	+		PS417_27250	0.46	-0.0
5,882,393	-		PS417_27250	0.78	-0.1
5,882,476	+				-1.5
5,882,477	-				+0.8
5,882,496	+				-0.4
5,882,496	+				+0.1
5,882,496	+				+0.3
5,882,497	-				-0.1
5,882,527	-				-0.1
5,882,531	+				-0.2
5,882,707	-		PS417_27255	0.16	+0.3
5,882,738	-		PS417_27255	0.19	+0.2
5,882,759	-		PS417_27255	0.21	+0.3
5,882,829	+		PS417_27255	0.28	-0.1
5,883,222	-		PS417_27255	0.64	+0.3
5,883,359	+		PS417_27255	0.77	-1.7
5,883,359	+		PS417_27255	0.77	+0.0
5,883,410	+		PS417_27255	0.81	+0.8
5,883,466	+		PS417_27255	0.86	+1.3
5,883,466	+		PS417_27255	0.86	+0.4
5,883,466	+		PS417_27255	0.86	+0.1
5,883,466	+		PS417_27255	0.86	+0.8
5,883,466	+		PS417_27255	0.86	-0.2
5,883,467	-		PS417_27255	0.87	-0.2
5,883,467	-		PS417_27255	0.87	+1.6
5,883,590	+				+0.2
5,883,651	+				-0.0
5,883,678	-				-1.2
5,883,743	+				-0.5
5,883,756	+				+1.5
5,883,822	+				-1.0
5,884,139	-		PS417_27260	0.23	-0.0
5,884,234	+		PS417_27260	0.29	-0.1
5,884,285	+		PS417_27260	0.32	+0.1