Strain Fitness in Pseudomonas simiae WCS417 around PS417_27140

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
5,859,353	-				+0.1
5,859,353	-				+0.8
5,859,687	+				-0.2
5,859,688	-				+1.3
5,859,688	-				-0.6
5,860,026	+				+0.0
5,860,131	+		PS417_27140	0.13	-0.8
5,860,131	+		PS417_27140	0.13	-0.6
5,860,132	-		PS417_27140	0.13	-0.3
5,860,964	-		PS417_27140	0.74	-0.4
5,861,009	-		PS417_27140	0.77	-1.2
5,861,213	+				+0.3
5,861,214	-				+0.0
5,861,214	-				+0.3
5,861,225	-				+0.5
5,861,225	-				+0.7
5,861,225	-				-0.1
5,861,228	+				+0.6
5,861,300	+				-0.4
5,861,301	-				+0.2
5,861,324	+				+0.5
5,861,443	+				+0.1
5,861,516	+				-0.5
5,861,516	+				+0.3
5,861,517	-				+1.2
5,861,517	-				-0.1
5,861,517	-				+0.4
5,861,536	-				+0.1
5,861,536	-				-0.5
5,861,668	-		PS417_27145	0.19	+0.4
5,861,709	+		PS417_27145	0.25	-0.3
5,861,835	+		PS417_27145	0.45	-0.1
5,861,836	-		PS417_27145	0.45	-0.1
5,861,836	-		PS417_27145	0.45	-0.5
5,861,861	+		PS417_27145	0.49	-0.1
5,861,861	+		PS417_27145	0.49	+0.1
5,861,862	-		PS417_27145	0.49	-1.0
5,861,862	-		PS417_27145	0.49	-0.5
5,861,865	+		PS417_27145	0.50	+0.1
5,861,865	+		PS417_27145	0.50	+0.1
5,861,865	+		PS417_27145	0.50	+0.1
5,861,865	+		PS417_27145	0.50	-0.2
5,861,865	+		PS417_27145	0.50	-0.5
5,861,866	-		PS417_27145	0.50	-0.2
5,861,866	-		PS417_27145	0.50	-0.0
5,861,866	-		PS417_27145	0.50	+0.2
5,861,866	-		PS417_27145	0.50	+0.1
5,861,866	-		PS417_27145	0.50	-0.4
5,862,061	-		PS417_27145	0.80	-0.2
5,862,092	+		PS417_27145	0.85	-0.2
5,862,135	+				+1.9
5,862,135	+				-0.3
5,862,135	+				+0.1
5,862,135	+				-0.8
5,862,136	-				+0.1
5,862,136	-				-0.2
5,862,136	-				+0.8
5,862,136	-				+0.1
5,862,136	-				-0.7
5,862,147	+				+0.3
5,862,147	+				-0.3
5,862,147	+				+0.2
5,862,159	+				+0.2
5,862,160	-				+0.4
5,862,160	-				-1.7
5,862,160	-				-0.9
5,862,186	+				-0.3
5,862,187	-				-0.1
5,862,187	-				-0.3
5,862,196	-				-0.2