Strain Fitness in Pseudomonas simiae WCS417 around PS417_25115

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
5,444,340	+		PS417_25105	0.69	-0.6
5,444,350	-		PS417_25105	0.71	+2.5
5,444,483	+		PS417_25105	0.89	+1.0
5,444,483	+		PS417_25105	0.89	-0.3
5,444,483	+		PS417_25105	0.89	-0.8
5,444,955	-		PS417_25110	0.54	+1.2
5,444,993	+		PS417_25110	0.59	-0.3
5,444,993	+		PS417_25110	0.59	-0.1
5,444,993	+		PS417_25110	0.59	+0.9
5,444,994	-		PS417_25110	0.59	+1.9
5,445,139	+		PS417_25110	0.79	-0.9
5,445,139	+		PS417_25110	0.79	+0.0
5,445,172	+		PS417_25110	0.84	+0.4
5,445,172	+		PS417_25110	0.84	-0.7
5,445,172	+		PS417_25110	0.84	+0.2
5,445,328	+				+0.1
5,445,337	+				-1.1
5,445,484	+				+0.0
5,445,484	+				+0.3
5,445,484	+				-0.0
5,445,484	+				-0.3
5,445,485	-				+2.1
5,445,485	-				+2.3
5,445,485	-				+3.8
5,445,485	-				+2.5
5,445,485	-				+1.2
5,445,485	-				+2.2
5,445,502	+				+0.0
5,445,503	-				+2.6
5,445,852	-		PS417_25115	0.25	+0.2
5,445,932	+		PS417_25115	0.28	-0.3
5,446,164	-		PS417_25115	0.39	+0.3
5,446,182	-		PS417_25115	0.40	+0.3
5,446,182	-		PS417_25115	0.40	-0.1
5,446,191	+		PS417_25115	0.40	+0.1
5,446,224	-		PS417_25115	0.42	-0.8
5,446,277	-		PS417_25115	0.44	+0.1
5,446,411	+		PS417_25115	0.50	+0.3
5,446,416	-		PS417_25115	0.50	-0.0
5,446,475	+		PS417_25115	0.53	-0.3
5,446,476	-		PS417_25115	0.53	-0.0
5,446,651	-		PS417_25115	0.61	-0.3
5,446,651	-		PS417_25115	0.61	+0.3
5,446,651	-		PS417_25115	0.61	-0.1
5,446,651	-		PS417_25115	0.61	-0.4
5,446,765	-		PS417_25115	0.66	+0.7
5,446,765	-		PS417_25115	0.66	-0.2
5,446,795	-		PS417_25115	0.67	+1.0
5,446,795	-				+2.9
5,446,965	+		PS417_25115	0.75	-1.1
5,446,965	+		PS417_25115	0.75	-0.5
5,446,965	+		PS417_25115	0.75	-0.6
5,446,966	-		PS417_25115	0.75	+1.6
5,446,966	-		PS417_25115	0.75	-0.2
5,446,966	-		PS417_25115	0.75	+0.2
5,446,972	-		PS417_25115	0.75	-0.0
5,446,986	-		PS417_25115	0.76	+0.7
5,447,059	-		PS417_25115	0.79	-0.3
5,447,180	+		PS417_25115	0.85	+1.3
5,447,181	-		PS417_25115	0.85	-0.2
5,447,245	+		PS417_25115	0.88	+0.3
5,447,414	+				+1.2
5,447,588	-				+2.2
5,447,685	-		PS417_25120	0.18	+2.5
5,447,807	-		PS417_25120	0.41	+1.4
5,447,839	-		PS417_25120	0.47	+2.3
5,447,857	+		PS417_25120	0.50	-0.2
5,448,054	-		PS417_25120	0.87	-0.3
5,448,257	+				-0.3
5,448,261	+				-0.1
5,448,278	-				+3.1
5,448,295	-				+2.5
5,448,307	+		PS417_25125	0.11	+0.6
5,448,379	-		PS417_25125	0.17	+1.6
5,448,465	+		PS417_25125	0.25	+0.3
5,448,465	+		PS417_25125	0.25	+0.3
5,448,510	+		PS417_25125	0.28	+0.1