Strain Fitness in Pseudomonas simiae WCS417 around PS417_24835

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
5,386,070	+		PS417_24825	0.84	+0.0
5,386,236	-				-0.9
5,386,271	-				-0.4
5,386,499	-		PS417_24830	0.44	-1.8
5,386,552	+		PS417_24830	0.56	-0.5
5,386,553	-		PS417_24830	0.56	+0.4
5,386,553	-		PS417_24830	0.56	+0.0
5,386,553	-		PS417_24830	0.56	+0.1
5,386,553	-		PS417_24830	0.56	-1.1
5,386,553	-		PS417_24830	0.56	-0.5
5,386,553	-		PS417_24830	0.56	-0.2
5,386,662	+		PS417_24830	0.80	+0.9
5,386,663	-		PS417_24830	0.80	+0.4
5,386,688	-		PS417_24830	0.85	-0.3
5,386,729	+				+0.0
5,386,730	-				-1.4
5,386,887	+				+1.0
5,386,887	+				-0.7
5,386,887	+				+0.3
5,386,888	-				-0.6
5,386,954	-				-1.6
5,386,975	+				+0.3
5,386,990	-				-3.2
5,386,990	-				-3.3
5,386,990	-				-2.4
5,386,990	-				-1.6
5,386,998	-				-3.6
5,387,103	+				-1.9
5,387,120	-				-1.9
5,387,127	+		PS417_24835	0.10	-3.4
5,387,143	-				+1.3
5,387,316	+		PS417_24835	0.39	-3.3
5,387,316	+		PS417_24835	0.39	-1.8
5,387,316	+		PS417_24835	0.39	-2.9
5,387,317	-		PS417_24835	0.39	-4.3
5,387,317	-		PS417_24835	0.39	-5.1
5,387,317	-		PS417_24835	0.39	-4.1
5,388,168	+		PS417_24840	0.54	+0.5
5,388,291	+		PS417_24840	0.69	-1.5
5,388,292	-		PS417_24840	0.70	-0.9
5,388,466	-				+0.2
5,388,544	-				-0.8
5,388,582	+				-0.4