Strain Fitness in Pseudomonas simiae WCS417 around PS417_23920

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
5,175,550	+		PS417_23915	0.25	+2.1
5,175,634	+		PS417_23915	0.35	+1.0
5,175,797	-		PS417_23915	0.54	+1.7
5,175,872	+		PS417_23915	0.62	+1.9
5,176,223	+				+1.3
5,176,276	+				-0.0
5,176,276	+				-0.6
5,176,288	-				+0.3
5,176,288	-				+0.7
5,176,298	+				-0.2
5,176,368	+				+0.4
5,176,379	+				-0.4
5,176,379	+				+0.7
5,176,397	+				+0.2
5,176,939	-				+0.7
5,178,054	+				+1.5
5,178,151	-				-0.3
5,178,255	+				+0.1
5,178,255	+				-0.3
5,178,255	+				+0.1
5,178,256	-				-0.1
5,178,256	-				+1.1
5,178,257	+				-0.2
5,178,258	-				+0.1
5,178,293	+				+1.7
5,178,417	+		PS417_23925	0.12	-0.8
5,178,417	+				-1.0
5,178,418	-		PS417_23925	0.12	-1.2
5,178,594	+		PS417_23925	0.21	-0.2
5,178,594	+		PS417_23925	0.21	+0.6
5,178,594	+		PS417_23925	0.21	-0.0
5,178,595	-		PS417_23925	0.21	+0.4
5,178,595	-		PS417_23925	0.21	+0.3
5,178,595	-		PS417_23925	0.21	+0.1
5,178,595	-		PS417_23925	0.21	+0.3
5,178,705	-		PS417_23925	0.27	+0.8
5,178,776	+				+0.3
5,178,776	+		PS417_23925	0.30	-0.3
5,178,776	+		PS417_23925	0.30	-0.4
5,178,777	-		PS417_23925	0.30	-0.1
5,178,885	+		PS417_23925	0.36	+0.5
5,178,885	+		PS417_23925	0.36	+1.3
5,178,963	+				+0.3
5,178,963	+		PS417_23925	0.40	+0.7
5,178,964	-		PS417_23925	0.40	+0.1
5,178,964	-		PS417_23925	0.40	+0.3
5,178,964	-		PS417_23925	0.40	+0.2
5,179,047	+		PS417_23925	0.44	-0.4