Strain Fitness in Pseudomonas simiae WCS417 around PS417_21475

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
4,659,779	+				-0.3
4,659,780	-				-0.0
4,659,780	-				-0.7
4,659,781	+				+0.6
4,659,781	+				+1.0
4,659,781	+				-0.0
4,659,781	+				+0.5
4,659,782	-				+0.2
4,659,782	-				-0.8
4,659,782	-				+0.1
4,659,782	-				+0.7
4,659,782	-				-0.0
4,659,782	-				-0.3
4,659,782	-				-0.5
4,659,782	-				+0.8
4,660,135	+		PS417_21470	0.39	-0.4
4,660,136	-		PS417_21470	0.39	+0.9
4,660,136	-		PS417_21470	0.39	+0.8
4,660,136	-		PS417_21470	0.39	+0.2
4,660,140	-		PS417_21470	0.40	-0.3
4,660,140	-		PS417_21470	0.40	-0.7
4,660,140	-		PS417_21470	0.40	+0.0
4,660,234	+		PS417_21470	0.49	-0.7
4,660,261	+		PS417_21470	0.52	-0.7
4,660,261	+		PS417_21470	0.52	-0.3
4,660,261	+		PS417_21470	0.52	+0.8
4,660,261	+		PS417_21470	0.52	-1.5
4,660,261	+		PS417_21470	0.52	+0.2
4,660,261	+		PS417_21470	0.52	-0.2
4,660,262	-		PS417_21470	0.52	-0.0
4,660,262	-		PS417_21470	0.52	+0.3
4,660,262	-		PS417_21470	0.52	-0.2
4,660,262	-		PS417_21470	0.52	+1.4
4,660,264	+		PS417_21470	0.52	-0.1
4,660,265	-		PS417_21470	0.52	-0.2
4,660,301	+				+1.1
4,660,310	+		PS417_21470	0.57	-0.4
4,660,310	+		PS417_21470	0.57	-0.2
4,660,348	+		PS417_21470	0.61	+0.3
4,660,349	-		PS417_21470	0.61	-0.2
4,660,349	-		PS417_21470	0.61	+0.7
4,660,349	-		PS417_21470	0.61	-0.1
4,660,349	-		PS417_21470	0.61	-0.4
4,660,354	+		PS417_21470	0.61	-0.6
4,660,451	+		PS417_21470	0.71	+0.1
4,660,513	+		PS417_21470	0.78	-0.1
4,660,513	+		PS417_21470	0.78	-1.5
4,660,513	+		PS417_21470	0.78	-0.5
4,660,514	-		PS417_21470	0.78	+0.1
4,660,514	-		PS417_21470	0.78	-0.2
4,660,514	-		PS417_21470	0.78	-0.4
4,660,514	-		PS417_21470	0.78	+0.3
4,660,514	-		PS417_21470	0.78	-0.2
4,660,514	-		PS417_21470	0.78	+0.6
4,660,672	-				+0.4
4,660,686	-				-0.0
4,660,686	-				-1.0
4,660,686	-				+0.0
4,660,757	-				-0.7
4,660,757	-				+0.2
4,660,819	+				+0.5
4,660,852	+		PS417_21475	0.15	+1.7
4,660,852	+		PS417_21475	0.15	-1.1
4,660,852	+		PS417_21475	0.15	+0.3
4,661,179	+		PS417_21475	0.64	+0.3
4,661,179	+		PS417_21475	0.64	+0.8
4,661,179	+		PS417_21475	0.64	+0.0
4,661,401	+				-1.7
4,661,508	-		PS417_21480	0.11	+2.7
4,661,832	-		PS417_21480	0.45	+2.2
4,662,376	-				+0.5