Strain Fitness in Pseudomonas simiae WCS417 around PS417_17790

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,883,584	+				-1.4
3,883,584	+		PS417_17785	0.60	-1.6
3,883,585	-		PS417_17785	0.60	-2.8
3,883,585	-		PS417_17785	0.60	-2.9
3,883,585	-		PS417_17785	0.60	-2.2
3,883,585	-		PS417_17785	0.60	-2.2
3,883,684	+		PS417_17785	0.66	-1.0
3,883,708	+		PS417_17785	0.67	-1.4
3,884,017	+		PS417_17785	0.86	-1.7
3,884,018	-		PS417_17785	0.86	-2.3
3,884,018	-		PS417_17785	0.86	-1.0
3,884,054	-		PS417_17785	0.88	-0.9
3,884,066	+		PS417_17785	0.89	+0.2
3,884,067	-		PS417_17785	0.89	-2.4
3,884,138	+				-1.9
3,884,206	+				-1.5
3,884,209	+				-2.4
3,884,209	+				-2.4
3,884,210	-				-2.7
3,884,258	+				-0.5
3,884,322	+				-0.5
3,884,322	+				-1.2
3,884,397	-				+0.8
3,884,558	+				-0.8
3,884,559	-				-0.9
3,884,600	-				-0.4
3,884,618	-				-0.1
3,884,618	-				+0.7
3,884,628	+				-0.7
3,884,629	-				-0.9
3,884,688	+		PS417_17790	0.17	+0.1
3,884,688	+		PS417_17790	0.17	+0.4
3,884,688	+		PS417_17790	0.17	+0.2
3,884,688	+				+3.3
3,884,689	-		PS417_17790	0.17	+1.5
3,884,832	-		PS417_17790	0.37	+0.1
3,884,893	-		PS417_17790	0.45	-0.3
3,885,047	+		PS417_17790	0.67	+0.2
3,885,048	-		PS417_17790	0.67	-0.4
3,885,192	-		PS417_17790	0.87	-1.0
3,885,223	+				-0.3
3,885,224	-				-0.4
3,885,573	+		PS417_17795	0.39	+0.7
3,885,735	+		PS417_17795	0.61	+3.3
3,885,853	-		PS417_17795	0.77	-0.1