Strain Fitness in Pseudomonas simiae WCS417 around PS417_17270

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,770,814	-				-0.1
3,770,869	+				-0.1
3,770,899	-				-0.3
3,771,008	-				-0.6
3,771,008	-				+0.5
3,771,008	-				-0.0
3,771,132	+		PS417_17270	0.17	+0.2
3,771,132	+		PS417_17270	0.17	-0.5
3,771,229	-		PS417_17270	0.27	-1.0
3,771,229	-		PS417_17270	0.27	-1.1
3,771,229	-		PS417_17270	0.27	-1.2
3,771,450	+		PS417_17270	0.51	+0.9
3,771,450	+		PS417_17270	0.51	-0.1
3,771,451	-		PS417_17270	0.51	-0.5
3,771,594	+		PS417_17270	0.67	-1.3
3,771,913	-				+0.5
3,771,955	-				+1.3
3,772,318	+		PS417_17275	0.41	-0.2
3,772,318	+		PS417_17275	0.41	-0.4
3,772,318	+		PS417_17275	0.41	-0.3
3,772,319	-		PS417_17275	0.42	-0.5
3,772,418	-		PS417_17275	0.57	-1.1
3,772,432	+		PS417_17275	0.59	-0.6
3,772,499	+		PS417_17275	0.70	-0.4
3,772,500	-		PS417_17275	0.70	-0.2
3,772,574	-		PS417_17275	0.82	-0.0
3,772,761	+				+1.5
3,772,761	+				-0.5
3,772,762	-				+1.1
3,772,776	+				-0.8
3,772,830	+				+1.3
3,772,875	-				-0.4
3,772,875	-				-0.9
3,772,890	-				-0.3
3,772,891	+				+0.7