Strain Fitness in Pseudomonas simiae WCS417 around PS417_16350

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,576,118	-				-0.3
3,576,122	+				-1.2
3,576,124	+				+0.7
3,576,124	+				-0.1
3,576,124	+				-0.8
3,576,124	+				-0.2
3,576,124	+				-0.4
3,576,124	+				+0.5
3,576,124	+				+0.2
3,576,124	+				-0.0
3,576,124	+				-0.8
3,576,125	-				+0.2
3,576,125	-				-0.7
3,576,125	-				+0.5
3,576,125	-				+0.2
3,576,132	+				-0.7
3,576,164	+				-0.5
3,576,262	-				-0.4
3,576,262	-				-1.4
3,577,200	-		PS417_16350	0.47	+0.7
3,577,672	-		PS417_16350	0.68	+0.6
3,577,672	-		PS417_16350	0.68	-0.0
3,577,745	+		PS417_16350	0.72	+0.2
3,578,330	+				+0.5
3,578,488	+				-0.8
3,578,489	-				+0.4
3,578,489	-				-0.2
3,578,489	-				+1.0
3,578,543	+				-1.3
3,578,544	-				-0.2
3,578,544	-				+0.4
3,578,783	-		PS417_16355	0.51	+0.6
3,578,801	-		PS417_16355	0.55	+0.3
3,578,806	+		PS417_16355	0.56	-0.2
3,578,807	-		PS417_16355	0.56	-0.7
3,578,810	+		PS417_16355	0.56	+0.2
3,578,810	+		PS417_16355	0.56	-0.1
3,578,810	+		PS417_16355	0.56	+0.0
3,578,810	+		PS417_16355	0.56	-0.2
3,578,811	-		PS417_16355	0.57	-1.0
3,578,811	-		PS417_16355	0.57	+0.0
3,578,943	+		PS417_16355	0.82	-1.0
3,578,960	+		PS417_16355	0.85	-0.5
3,578,978	+		PS417_16355	0.89	-0.0
3,578,979	-		PS417_16355	0.89	-0.1
3,579,254	+		PS417_16360	0.16	+0.1