Strain Fitness in Pseudomonas simiae WCS417 around PS417_15360

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,369,090	-				-0.5
3,369,135	+				-0.4
3,369,136	-				-1.2
3,369,137	+				-0.2
3,369,163	-				+0.9
3,369,166	+				-0.1
3,369,166	+				-0.2
3,369,167	-				-0.4
3,369,167	-				+0.3
3,369,217	+				+0.2
3,369,217	+				-0.9
3,369,309	+		PS417_15355	0.12	-0.7
3,369,351	+		PS417_15355	0.17	+0.8
3,369,352	-		PS417_15355	0.17	+0.7
3,369,405	+		PS417_15355	0.24	+0.0
3,369,405	+		PS417_15355	0.24	+0.1
3,369,405	+		PS417_15355	0.24	-0.1
3,369,405	+		PS417_15355	0.24	-0.2
3,369,576	+		PS417_15355	0.45	+1.2
3,369,655	-		PS417_15355	0.55	-0.2
3,369,655	-		PS417_15355	0.55	+0.6
3,369,886	-		PS417_15355	0.83	-0.5
3,369,908	+		PS417_15355	0.86	+0.1
3,369,915	+		PS417_15355	0.86	+0.4
3,369,915	+		PS417_15355	0.86	+0.3
3,369,916	-		PS417_15355	0.87	-1.3
3,370,277	+		PS417_15360	0.23	+0.7
3,370,360	+		PS417_15360	0.30	-0.1
3,370,360	+		PS417_15360	0.30	+0.7
3,370,553	+		PS417_15360	0.47	+0.7
3,370,557	+		PS417_15360	0.47	-0.7
3,370,557	+		PS417_15360	0.47	+0.1
3,370,558	-		PS417_15360	0.48	-0.6
3,370,558	-				+1.8
3,370,558	-		PS417_15360	0.48	+0.4
3,370,950	+		PS417_15360	0.82	+0.8
3,370,950	+		PS417_15360	0.82	+0.8
3,370,950	+		PS417_15360	0.82	-0.1
3,370,950	+		PS417_15360	0.82	+0.8
3,370,950	+		PS417_15360	0.82	-0.5
3,370,951	-		PS417_15360	0.82	+0.2
3,370,951	-		PS417_15360	0.82	-0.9
3,370,951	-		PS417_15360	0.82	+0.4
3,370,955	-		PS417_15360	0.82	+0.6
3,371,056	+				+0.2
3,371,096	+				+0.6
3,371,152	-				-1.1
3,371,152	-				-2.1
3,371,155	+				+0.4
3,371,156	-				-0.9
3,371,156	-				-0.5
3,371,661	-		PS417_15365	0.64	+0.6
3,372,026	+				-2.5
3,372,104	-		PS417_15370	0.14	+0.8