Strain Fitness in Pseudomonas simiae WCS417 around PS417_14195

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,109,342	-				+0.7
3,109,361	-				-0.2
3,109,368	+				-0.8
3,109,368	+				-0.8
3,109,394	+				+3.4
3,109,395	-				-2.3
3,109,396	+				+1.6
3,109,398	+				-0.5
3,109,398	+				+1.5
3,109,398	+				-2.2
3,109,399	-				-0.5
3,109,399	-				-0.3
3,109,399	-				+0.2
3,109,403	+				-0.1
3,109,404	-				-0.4
3,109,405	+				+0.7
3,109,405	+				+1.6
3,109,405	+				-0.0
3,109,406	-				+0.5
3,109,467	+				+0.2
3,109,501	-				+0.4
3,109,565	-				+0.1
3,109,565	-				-0.0
3,109,620	-				-1.8
3,109,677	+				+0.1
3,109,717	+				+0.6
3,109,749	+				+0.2
3,109,749	+				-0.0
3,109,749	+				-0.1
3,109,750	-				+0.2
3,109,876	+				+0.8
3,109,876	+				-0.4
3,109,877	-				-0.4
3,109,988	+				+0.8
3,110,094	+				-0.2
3,110,200	-				+0.4
3,110,239	+				-0.9
3,110,427	+				-0.2
3,110,428	-				+2.2
3,110,502	+				-0.8
3,110,503	-				+0.1
3,110,503	-				+0.5
3,110,503	-				-0.8
3,110,509	+				-0.1
3,110,510	-				+0.3
3,110,687	-				+0.8
3,110,749	+		PS417_14195	0.18	+0.1
3,110,893	-		PS417_14195	0.24	+0.5
3,110,972	+		PS417_14195	0.27	+0.1
3,110,972	+		PS417_14195	0.27	-1.0
3,111,361	+		PS417_14195	0.41	+0.5
3,111,361	+		PS417_14195	0.41	-0.8
3,111,362	-		PS417_14195	0.41	-0.2
3,111,768	+		PS417_14195	0.56	-0.3
3,111,840	+		PS417_14195	0.59	-1.0
3,112,085	-		PS417_14195	0.68	-0.0
3,112,226	+		PS417_14195	0.73	+0.1
3,112,344	-		PS417_14195	0.77	+0.2
3,112,465	+		PS417_14195	0.82	-0.5
3,112,470	+		PS417_14195	0.82	+1.4
3,112,470	+		PS417_14195	0.82	-1.2
3,112,471	-		PS417_14195	0.82	-0.1
3,112,471	-				-0.5
3,112,471	-		PS417_14195	0.82	+0.0
3,112,809	+				+0.5
3,112,809	+				-0.5
3,112,810	-				+0.5
3,112,810	-				-0.4
3,112,810	-				+0.8
3,112,932	+				-0.0
3,113,026	+				-0.8
3,113,027	-				-1.5
3,113,027	-				+2.9
3,113,027	-				+0.2
3,113,121	+		PS417_14200	0.27	-0.4
3,113,121	+		PS417_14200	0.27	-0.3
3,113,121	+		PS417_14200	0.27	-1.0
3,113,122	-		PS417_14200	0.27	-0.9
3,113,365	-				+0.7
3,113,482	-		PS417_14205	0.11	-0.2
3,113,485	-		PS417_14205	0.11	+0.6
3,113,597	+		PS417_14205	0.25	-0.1
3,113,597	+		PS417_14205	0.25	-1.4
3,113,597	+		PS417_14205	0.25	-0.0
3,113,598	-		PS417_14205	0.25	-0.5
3,113,598	-		PS417_14205	0.25	+0.0