Strain Fitness in Pseudomonas simiae WCS417 around PS417_13825

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,035,865	+		PS417_13820	0.41	-3.3
3,035,866	-		PS417_13820	0.41	-3.0
3,035,866	-		PS417_13820	0.41	-2.6
3,036,072	+		PS417_13820	0.56	-3.5
3,036,402	+		PS417_13820	0.80	-3.1
3,036,402	+		PS417_13820	0.80	-1.0
3,036,403	-		PS417_13820	0.80	-2.1
3,036,403	-				-1.2
3,036,568	-				-3.0
3,036,682	-				+1.1
3,036,682	-				+1.2
3,036,682	-				+1.7
3,036,873	+		PS417_13825	0.11	+2.4
3,036,873	+		PS417_13825	0.11	+2.1
3,036,895	-		PS417_13825	0.13	+2.3
3,037,029	+		PS417_13825	0.21	+3.1
3,037,184	+		PS417_13825	0.31	+3.3
3,037,278	+		PS417_13825	0.36	+3.5
3,037,282	-		PS417_13825	0.37	+2.6
3,037,470	+		PS417_13825	0.48	+3.3
3,037,471	-		PS417_13825	0.48	+3.2
3,037,473	+		PS417_13825	0.48	+2.6
3,037,497	+		PS417_13825	0.50	+3.4
3,037,498	-		PS417_13825	0.50	+3.8
3,037,498	-		PS417_13825	0.50	+2.9
3,037,660	+		PS417_13825	0.60	+3.3
3,037,660	+		PS417_13825	0.60	+3.3
3,037,660	+		PS417_13825	0.60	+2.0
3,037,956	+		PS417_13825	0.78	+3.0
3,037,956	+		PS417_13825	0.78	+2.5
3,037,957	-		PS417_13825	0.78	+3.6
3,037,957	-		PS417_13825	0.78	+2.7
3,037,958	+		PS417_13825	0.78	+2.6
3,037,959	-		PS417_13825	0.78	+3.5
3,037,959	-		PS417_13825	0.78	+3.1
3,037,992	+		PS417_13825	0.80	+2.6
3,037,993	-		PS417_13825	0.80	+2.8
3,038,094	+		PS417_13825	0.87	+3.5
3,038,122	+		PS417_13825	0.88	+2.9
3,038,200	-				+3.1
3,038,271	+				+2.0
3,038,271	+				+3.0
3,038,272	-				+2.8
3,038,275	+				+3.6
3,038,275	+				+2.8
3,038,276	-				+3.2
3,038,276	-				+3.9
3,038,359	+				+0.0
3,038,360	-				+0.5
3,038,718	+		PS417_13830	0.32	+0.2
3,038,719	-		PS417_13830	0.32	-1.2
3,038,961	+		PS417_13830	0.66	-0.1
3,039,109	+		PS417_13830	0.87	-0.5
3,039,110	-		PS417_13830	0.87	+1.5
3,039,110	-		PS417_13830	0.87	+0.1
3,039,181	+				-1.2
3,039,225	+				+0.2
3,039,225	+				-0.2
3,039,226	-				-0.8
3,039,260	-				+0.5