Strain Fitness in Pseudomonas simiae WCS417 around PS417_13780

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,025,747	-				-2.2
3,025,747	-				-1.0
3,025,747	-				-2.9
3,025,858	+		PS417_13775	0.12	-0.7
3,025,975	+		PS417_13775	0.25	+0.8
3,025,975	+		PS417_13775	0.25	-2.2
3,026,256	+		PS417_13775	0.58	-1.2
3,026,283	+		PS417_13775	0.61	-1.1
3,026,284	-		PS417_13775	0.61	-1.3
3,026,284	-		PS417_13775	0.61	-3.0
3,026,284	-		PS417_13775	0.61	-1.0
3,026,536	+				-1.4
3,026,536	+				-0.3
3,026,536	+				-1.2
3,026,537	-				-3.2
3,026,537	-				-1.9
3,026,537	-				-1.8
3,026,566	+				-0.4
3,026,566	+				-0.7
3,026,566	+				-2.0
3,026,566	+				-2.4
3,026,566	+				-0.8
3,026,567	-				-2.2
3,026,567	-				-2.6
3,026,567	-				-1.9
3,026,567	-				-0.4
3,026,568	+				-0.6
3,026,568	+				-0.2
3,026,569	-				-2.4
3,026,569	-				-0.7
3,026,569	-				-1.7
3,026,622	-				-2.3
3,026,622	-				-2.3
3,026,659	-				-2.6
3,026,665	+				-1.7
3,026,801	+				-1.0
3,026,801	+				-1.5
3,026,951	+		PS417_13780	0.22	-1.1
3,026,954	+				-0.2
3,026,954	+		PS417_13780	0.23	-0.8
3,027,108	-		PS417_13780	0.40	+0.0
3,027,219	-		PS417_13780	0.52	-2.8
3,027,219	-		PS417_13780	0.52	-2.8
3,027,437	+		PS417_13780	0.76	-2.5
3,027,439	+		PS417_13780	0.76	-2.2
3,027,439	+		PS417_13780	0.76	-1.6
3,027,440	-		PS417_13780	0.76	-2.9
3,027,884	+		PS417_13785	0.14	-2.5
3,027,885	-		PS417_13785	0.14	-2.7
3,027,924	-				-1.2
3,027,962	+		PS417_13785	0.23	-0.2
3,028,322	+		PS417_13785	0.67	-3.0
3,028,573	+				-2.0
3,028,620	-				-2.5