Strain Fitness in Pseudomonas simiae WCS417 around PS417_13745

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
3,018,275	-				+2.0
3,018,275	-				+1.5
3,018,275	-				+1.0
3,018,388	+		PS417_13730	0.48	+0.2
3,018,407	-		PS417_13730	0.56	-0.3
3,018,488	+		PS417_13730	0.90	-0.4
3,018,489	-				-1.8
3,018,658	+		PS417_13735	0.57	+1.6
3,018,659	-		PS417_13735	0.58	-0.0
3,018,743	-				+0.0
3,018,796	+				-0.0
3,018,797	-				+0.0
3,018,882	+				-0.2
3,019,097	-		PS417_13740	0.81	-1.1
3,019,097	-		PS417_13740	0.81	-1.4
3,019,097	-		PS417_13740	0.81	+2.2
3,019,117	+		PS417_13740	0.88	-0.4
3,019,118	-				+1.4
3,019,118	-		PS417_13740	0.89	-0.3
3,019,118	-		PS417_13740	0.89	-0.2
3,019,118	-		PS417_13740	0.89	-1.2
3,019,164	+				-0.3
3,019,166	+				-1.8
3,019,166	+				-0.2
3,019,166	+				-0.0
3,019,344	+		PS417_13745	0.12	+0.3
3,019,344	+		PS417_13745	0.12	-0.0
3,019,344	+		PS417_13745	0.12	-0.4
3,019,344	+		PS417_13745	0.12	-0.4
3,019,345	-		PS417_13745	0.12	-1.1
3,019,345	-		PS417_13745	0.12	+0.8
3,019,451	+		PS417_13745	0.26	-0.1
3,019,451	+		PS417_13745	0.26	+1.0
3,019,520	-		PS417_13745	0.35	-0.2
3,019,523	+		PS417_13745	0.36	+0.2
3,019,523	+		PS417_13745	0.36	+1.1
3,019,523	+		PS417_13745	0.36	-0.1
3,019,523	+		PS417_13745	0.36	-1.2
3,019,524	-		PS417_13745	0.36	-0.6
3,019,524	-		PS417_13745	0.36	+1.1
3,019,524	-		PS417_13745	0.36	-0.5
3,019,524	-		PS417_13745	0.36	-0.5
3,019,524	-		PS417_13745	0.36	+0.3
3,019,524	-		PS417_13745	0.36	+0.6
3,019,524	-		PS417_13745	0.36	+0.1
3,019,527	+		PS417_13745	0.36	+0.4
3,019,527	+		PS417_13745	0.36	-0.4
3,019,527	+		PS417_13745	0.36	+1.3
3,019,672	+		PS417_13745	0.55	-0.1
3,019,672	+		PS417_13745	0.55	-0.0
3,019,672	+				-0.2
3,019,672	+		PS417_13745	0.55	+0.2
3,019,673	-		PS417_13745	0.56	-0.4
3,019,714	+		PS417_13745	0.61	+0.1
3,019,715	-		PS417_13745	0.61	+0.6
3,019,715	-		PS417_13745	0.61	+0.0
3,019,715	-		PS417_13745	0.61	-0.1
3,019,715	-		PS417_13745	0.61	-0.7
3,019,796	-		PS417_13745	0.72	-0.7
3,019,796	-		PS417_13745	0.72	-0.7
3,019,816	+		PS417_13745	0.74	-0.0
3,019,991	+				-0.4
3,020,000	+				+0.8
3,020,000	+				-0.1
3,020,001	-				+0.6
3,020,001	-				-0.8
3,020,033	-				-0.5
3,020,033	-				+0.4
3,020,077	+				+0.4
3,020,198	+				-0.3
3,020,198	+				+1.4
3,020,198	+				+0.6
3,020,198	+				+0.4
3,020,199	-				+0.3
3,020,220	-				+0.0
3,020,230	-				+1.0
3,020,274	-		PS417_13750	0.15	+0.5
3,020,327	+		PS417_13750	0.26	+0.5
3,020,328	-		PS417_13750	0.26	-1.9
3,020,328	-		PS417_13750	0.26	+0.1
3,020,383	+		PS417_13750	0.38	-0.3
3,020,398	+		PS417_13750	0.41	+0.1
3,020,399	-		PS417_13750	0.41	-0.1
3,020,399	-		PS417_13750	0.41	-0.9
3,020,399	-		PS417_13750	0.41	-0.1
3,020,402	+		PS417_13750	0.42	+1.0
3,020,402	+				+0.3
3,020,403	-				+1.5
3,020,500	+		PS417_13750	0.62	+0.1
3,020,516	-		PS417_13750	0.66	-0.8
3,020,516	-				+1.8
3,020,539	+		PS417_13750	0.71	-0.4
3,020,616	-				-1.2
3,020,653	+				-2.3
3,020,654	-				-0.6
3,020,700	-				-0.4
3,020,774	+				-0.3
3,020,775	-				-0.5
3,020,813	-				-1.6
3,020,835	-				-0.1
3,020,851	+				-0.7
3,020,852	-				+0.1
3,020,980	+				+0.4
3,020,980	+				+0.2
3,021,002	+				-0.1