Strain Fitness in Pseudomonas simiae WCS417 around PS417_13120

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
2,865,636	+		PS417_13110	0.79	+1.0
2,865,636	+		PS417_13110	0.79	+1.2
2,865,636	+		PS417_13110	0.79	+0.7
2,865,735	+				+0.3
2,865,780	-				+0.9
2,865,879	+				+0.5
2,865,879	+				+0.8
2,865,891	+				+0.5
2,865,891	+				+0.0
2,865,892	-				+1.1
2,865,893	+				+0.7
2,866,086	-		PS417_13115	0.35	+0.6
2,866,118	+		PS417_13115	0.43	+0.8
2,866,324	-				+4.4
2,866,338	-				+4.7
2,866,338	-				+3.2
2,866,338	-				+4.3
2,866,338	-				+4.5
2,866,460	+				+0.4
2,866,460	+				+1.0
2,866,678	-				+3.4
2,866,678	-				+2.7
2,866,678	-				+5.0
2,866,678	-				+5.1
2,866,678	-				+4.6
2,866,678	-				+5.2
2,866,681	+				+4.7
2,866,681	+				+4.8
2,866,682	-				+2.5
2,866,682	-				+5.8
2,866,768	-		PS417_13120	0.15	+4.8
2,866,797	+		PS417_13120	0.18	+4.5
2,866,797	+		PS417_13120	0.18	+5.0
2,866,911	+		PS417_13120	0.31	+4.8
2,866,963	-		PS417_13120	0.36	+4.5
2,867,121	+		PS417_13120	0.54	+4.6
2,867,190	+		PS417_13120	0.62	+5.7
2,867,191	-		PS417_13120	0.62	+4.5
2,867,191	-		PS417_13120	0.62	+4.5
2,867,232	+		PS417_13120	0.66	+4.6
2,867,233	-		PS417_13120	0.66	+4.6
2,867,424	+		PS417_13120	0.88	+5.5
2,867,621	-				+0.9
2,867,803	+		PS417_13125	0.10	+0.6
2,868,365	-				+2.4