Strain Fitness in Pseudomonas simiae WCS417 around PS417_13105

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
2,862,742	+		PS417_13100	0.55	+1.2
2,862,742	+		PS417_13100	0.55	+0.7
2,862,752	-		PS417_13100	0.55	+0.5
2,862,969	+		PS417_13100	0.69	+0.9
2,863,032	-		PS417_13100	0.73	-0.1
2,863,153	+		PS417_13100	0.81	+0.5
2,863,154	-		PS417_13100	0.81	+0.4
2,863,157	+		PS417_13100	0.81	+1.0
2,863,157	+		PS417_13100	0.81	+1.4
2,863,269	+		PS417_13100	0.88	+0.5
2,863,269	+				+3.1
2,863,269	+		PS417_13100	0.88	+1.6
2,863,600	-				-1.5
2,863,600	-				-0.0
2,863,600	-				+0.3
2,863,600	-				-1.6
2,863,617	+				+0.5
2,863,617	+				+0.9
2,863,617	+				+0.8
2,863,617	+				+1.2
2,863,618	-				+1.4
2,863,618	-				-0.1
2,863,618	-				-2.2
2,863,618	-				+0.6
2,863,618	-				-0.6
2,863,935	+				+1.9
2,863,935	+		PS417_13105	0.27	+0.9
2,863,936	-		PS417_13105	0.27	+0.4
2,863,938	-		PS417_13105	0.27	+0.6
2,863,938	-		PS417_13105	0.27	+0.2
2,864,339	+		PS417_13105	0.59	+0.9
2,864,366	+		PS417_13105	0.62	+0.6
2,864,366	+		PS417_13105	0.62	+0.7
2,864,366	+		PS417_13105	0.62	+0.9
2,864,366	+		PS417_13105	0.62	+0.9
2,864,742	-				-0.2
2,864,742	-				-1.4
2,864,976	+				+1.3
2,865,229	-		PS417_13110	0.29	-1.2
2,865,331	+		PS417_13110	0.41	+1.3
2,865,342	-		PS417_13110	0.42	+0.3
2,865,483	+		PS417_13110	0.60	+0.2
2,865,483	+		PS417_13110	0.60	+1.7
2,865,483	+		PS417_13110	0.60	+0.9
2,865,483	+		PS417_13110	0.60	+1.7
2,865,484	-		PS417_13110	0.60	-0.6
2,865,630	+		PS417_13110	0.78	+1.2
2,865,636	+		PS417_13110	0.79	+1.0
2,865,636	+		PS417_13110	0.79	+1.2
2,865,636	+		PS417_13110	0.79	+0.7
2,865,735	+				+0.3
2,865,780	-				+0.9