Strain Fitness in Pseudomonas simiae WCS417 around PS417_12435

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
2,703,650	+		PS417_12430	0.69	-0.4
2,703,650	+		PS417_12430	0.69	-0.1
2,703,651	-		PS417_12430	0.69	+0.4
2,703,651	-		PS417_12430	0.69	-0.2
2,703,651	-		PS417_12430	0.69	+0.5
2,703,743	+		PS417_12430	0.73	-0.4
2,703,750	-		PS417_12430	0.74	-0.2
2,703,750	-		PS417_12430	0.74	-0.6
2,703,752	+		PS417_12430	0.74	-0.3
2,703,752	+		PS417_12430	0.74	-0.5
2,703,753	-		PS417_12430	0.74	-0.1
2,703,753	-		PS417_12430	0.74	-1.0
2,703,753	-		PS417_12430	0.74	-0.3
2,703,753	-		PS417_12430	0.74	+0.7
2,703,896	+		PS417_12430	0.80	-1.1
2,703,936	+		PS417_12430	0.82	+1.2
2,703,937	-		PS417_12430	0.82	-0.5
2,704,059	+		PS417_12430	0.87	-0.6
2,704,060	-		PS417_12430	0.87	-0.6
2,704,324	-				-0.2
2,704,468	+				-1.7
2,704,468	+				-0.2
2,704,469	-				-0.2
2,704,469	-				-0.4
2,704,730	+		PS417_12435	0.16	-0.9
2,704,731	-		PS417_12435	0.16	-0.5
2,704,751	+		PS417_12435	0.17	+0.2
2,704,751	+		PS417_12435	0.17	+0.6
2,704,838	+		PS417_12435	0.22	+0.8
2,704,839	-		PS417_12435	0.22	-0.3
2,704,839	-		PS417_12435	0.22	-0.6
2,704,908	-		PS417_12435	0.26	-1.4
2,704,926	-		PS417_12435	0.27	-2.0
2,704,926	-		PS417_12435	0.27	-0.5
2,704,934	+		PS417_12435	0.28	-0.2
2,704,934	+				+1.2
2,704,934	+		PS417_12435	0.28	+0.8
2,704,935	-		PS417_12435	0.28	-0.7
2,704,935	-		PS417_12435	0.28	-0.7
2,705,154	-		PS417_12435	0.40	-1.0
2,705,154	-		PS417_12435	0.40	+0.2
2,705,154	-		PS417_12435	0.40	-1.7
2,705,154	-		PS417_12435	0.40	+0.8
2,705,234	+		PS417_12435	0.45	-0.0
2,705,244	-		PS417_12435	0.45	+1.4
2,705,348	+		PS417_12435	0.51	-0.4
2,705,429	+		PS417_12435	0.56	+0.9
2,705,479	+		PS417_12435	0.59	-1.8
2,705,479	+		PS417_12435	0.59	+0.0
2,705,652	+		PS417_12435	0.69	+0.2
2,705,759	+		PS417_12435	0.75	-0.6
2,705,921	+		PS417_12435	0.84	+0.7
2,706,119	+				-0.7
2,706,177	+				+1.4
2,706,177	+				-0.3
2,706,178	-				-0.1
2,706,306	+				+0.1
2,706,306	+				-1.5
2,706,306	+				-0.0
2,706,344	+				+0.0
2,706,502	+				+0.3
2,706,502	+				-0.1
2,706,502	+				+0.2
2,706,502	+				-1.6
2,706,503	-				-0.3
2,706,503	-				+0.4
2,706,503	-				-0.1
2,706,547	+				-0.3
2,706,548	-				-0.5
2,706,565	+				-0.4
2,706,619	+				+1.2
2,706,768	+				+0.4
2,706,775	+				+1.2
2,706,775	+				+0.8
2,706,775	+				-0.8
2,706,776	-				-0.8
2,706,776	-				-0.2
2,706,791	+				+0.0
2,706,794	+				+1.2
2,706,795	-				-1.0
2,706,798	+				+0.3
2,706,798	+				-0.2
2,706,855	-				+0.7
2,706,884	+				+0.4
2,706,885	-				-0.2
2,706,919	+				-1.2
2,707,000	+		PS417_12445	0.19	+0.4
2,707,104	+		PS417_12445	0.30	+0.1
2,707,105	-		PS417_12445	0.30	-0.2
2,707,106	+		PS417_12445	0.30	+1.3
2,707,155	+		PS417_12445	0.35	+0.4