Strain Fitness in Pseudomonas simiae WCS417 around PS417_10835

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
2,316,451	+				+0.1
2,316,452	-				+0.3
2,316,851	+		PS417_10835	0.30	-0.1
2,316,851	+		PS417_10835	0.30	-0.6
2,316,852	-		PS417_10835	0.30	-1.1
2,316,854	+		PS417_10835	0.31	+0.2
2,316,854	+		PS417_10835	0.31	-0.1
2,316,869	+		PS417_10835	0.32	-0.4
2,317,055	+		PS417_10835	0.46	-0.7
2,317,055	+		PS417_10835	0.46	-2.9
2,317,056	-		PS417_10835	0.46	+1.2
2,317,165	+		PS417_10835	0.54	-0.3
2,317,188	+		PS417_10835	0.56	+0.0
2,317,188	+		PS417_10835	0.56	+0.3
2,317,189	-		PS417_10835	0.56	-1.7
2,317,189	-		PS417_10835	0.56	-1.4
2,317,190	+		PS417_10835	0.56	-1.5
2,317,191	-		PS417_10835	0.56	-0.4
2,317,232	+		PS417_10835	0.59	-0.1
2,317,320	-		PS417_10835	0.66	+0.5
2,317,339	+		PS417_10835	0.67	-0.3
2,317,343	+		PS417_10835	0.68	+0.1
2,317,343	+		PS417_10835	0.68	+0.1
2,317,343	+		PS417_10835	0.68	-2.4
2,317,343	+		PS417_10835	0.68	-0.2
2,317,518	+		PS417_10835	0.81	-0.4
2,317,583	-		PS417_10835	0.86	+0.5
2,317,583	-		PS417_10835	0.86	-0.3
2,317,752	-				+0.5
2,317,752	-				-1.3
2,317,795	+				+0.2
2,317,796	-				+1.8
2,317,797	+				-0.9
2,317,797	+				-0.3
2,317,798	-				+0.4
2,317,981	+		PS417_10840	0.25	+0.2
2,317,981	+		PS417_10840	0.25	-0.1
2,318,209	+		PS417_10840	0.54	-1.5
2,318,494	+				-0.3