Strain Fitness in Pseudomonas simiae WCS417 around PS417_08195

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
1,794,626	+		PS417_08190	0.56	+5.0
1,794,626	+		PS417_08190	0.56	+5.1
1,794,627	-		PS417_08190	0.56	+4.7
1,794,627	-		PS417_08190	0.56	+4.4
1,794,648	+		PS417_08190	0.57	+5.8
1,794,649	-		PS417_08190	0.57	+5.1
1,794,665	+		PS417_08190	0.58	+4.7
1,794,692	+		PS417_08190	0.59	+4.9
1,794,779	+		PS417_08190	0.64	+4.6
1,794,780	-		PS417_08190	0.64	+4.9
1,794,780	-		PS417_08190	0.64	+5.4
1,795,151	-		PS417_08190	0.82	+4.2
1,795,556	-				-0.4
1,795,572	+				-0.0
1,795,572	+				+0.8
1,795,573	-				+0.3
1,795,573	-				-0.2
1,795,573	-				-0.7
1,795,620	-				+4.5
1,795,748	+		PS417_08195	0.14	+3.6
1,795,772	+		PS417_08195	0.16	+1.4
1,795,847	-		PS417_08195	0.22	+4.1
1,795,880	-		PS417_08195	0.25	+5.1
1,795,883	+		PS417_08195	0.25	+4.4
1,795,884	-		PS417_08195	0.25	+5.0
1,795,884	-				+3.0
1,795,884	-		PS417_08195	0.25	+4.5
1,795,902	-		PS417_08195	0.27	+4.5
1,795,902	-		PS417_08195	0.27	+4.8
1,795,965	-		PS417_08195	0.32	+4.4
1,795,972	-		PS417_08195	0.33	+4.5
1,796,098	-		PS417_08195	0.43	+4.0
1,796,098	-		PS417_08195	0.43	+4.3
1,796,159	+		PS417_08195	0.48	+4.9
1,796,314	-		PS417_08195	0.61	+5.2
1,796,394	-		PS417_08195	0.67	+5.4
1,796,394	-		PS417_08195	0.67	+5.4
1,796,404	+		PS417_08195	0.68	+4.4
1,796,438	-		PS417_08195	0.71	+4.0
1,796,458	+		PS417_08195	0.72	+4.4
1,796,459	-		PS417_08195	0.72	+4.3
1,796,512	+		PS417_08195	0.77	+4.4
1,796,558	+		PS417_08195	0.81	+4.2
1,796,578	+		PS417_08195	0.82	+5.0
1,796,579	-		PS417_08195	0.82	+3.8
1,796,740	-				+4.7
1,796,740	-				+5.2
1,796,740	-				+4.3
1,796,743	+				+4.5
1,796,744	-				+4.4
1,796,812	+				+4.3
1,796,812	+				+3.8
1,796,868	-		PS417_08200	0.10	+2.2
1,797,094	+		PS417_08200	0.39	+3.8
1,797,271	-		PS417_08200	0.61	+4.2
1,797,284	-		PS417_08200	0.62	+3.1
1,797,285	+		PS417_08200	0.63	+5.5
1,797,417	+		PS417_08200	0.79	+4.6
1,797,486	+		PS417_08200	0.88	+4.2
1,797,563	+				+5.6
1,797,589	-				+2.2