Strain Fitness in Pseudomonas simiae WCS417 around PS417_07385

Experiment: Neomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.04 mg/ml
1,625,524	-		PS417_07375	0.71	-0.0
1,625,580	-		PS417_07375	0.76	-0.3
1,625,858	+				-0.2
1,625,898	+		PS417_07380	0.16	-0.7
1,625,899	-		PS417_07380	0.17	-0.7
1,625,899	-		PS417_07380	0.17	+0.1
1,625,899	-		PS417_07380	0.17	-0.1
1,625,904	+		PS417_07380	0.18	+1.2
1,625,904	+		PS417_07380	0.18	+0.7
1,625,905	-		PS417_07380	0.19	-0.5
1,625,905	-		PS417_07380	0.19	+0.2
1,625,905	-		PS417_07380	0.19	+0.3
1,625,905	-		PS417_07380	0.19	-0.2
1,625,993	+		PS417_07380	0.49	-0.5
1,625,994	-		PS417_07380	0.49	+0.6
1,625,994	-		PS417_07380	0.49	+0.4
1,626,186	+				-0.6
1,626,186	+				-0.1
1,626,187	-				+0.9
1,626,187	-				+0.3
1,626,188	+				-0.0
1,626,188	+				-0.1
1,626,189	-				-0.4
1,626,189	-				-0.2
1,626,206	-				-0.3
1,626,246	+				+0.4
1,626,246	+				+1.5
1,626,247	-				-1.1
1,626,247	-				+0.3
1,626,247	-				-0.0
1,626,247	-				+0.1
1,626,560	+		PS417_07385	0.33	+1.1
1,626,560	+		PS417_07385	0.33	+0.4
1,626,560	+		PS417_07385	0.33	+0.2
1,626,560	+		PS417_07385	0.33	+1.9
1,626,560	+		PS417_07385	0.33	+0.9
1,626,560	+		PS417_07385	0.33	+0.1
1,626,561	-		PS417_07385	0.33	-0.3
1,626,561	-		PS417_07385	0.33	+0.5
1,626,561	-				+0.1
1,626,561	-		PS417_07385	0.33	+1.4
1,626,821	+		PS417_07385	0.61	-0.1
1,626,822	-		PS417_07385	0.61	+0.5
1,626,854	-		PS417_07385	0.65	-2.3
1,626,867	-		PS417_07385	0.66	-0.1
1,627,229	+				-1.9
1,627,229	+				+0.2
1,627,229	+				+0.0
1,627,229	+				+0.8
1,627,229	+				-1.2
1,627,229	+				+0.2
1,627,229	+				-0.6
1,627,229	+				-1.7
1,627,229	+				+0.2
1,627,229	+				-0.3
1,627,229	+				-0.1
1,627,230	-				-0.8
1,627,230	-				+0.0
1,627,230	-				-0.1
1,627,230	-				-0.2
1,627,230	-				+0.1
1,627,230	-				+0.2
1,627,230	-				+0.1
1,627,230	-				+0.1
1,627,230	-				-0.3
1,627,230	-				+0.1
1,627,233	+				-0.5
1,627,314	+				+0.3
1,627,314	+				+0.8
1,627,315	-				-0.2
1,627,342	-				+0.1
1,627,342	-				+1.7
1,627,342	-				+1.5
1,627,639	-				-0.5
1,627,717	+		PS417_07390	0.11	+0.5
1,627,718	-		PS417_07390	0.11	-0.2
1,627,718	-		PS417_07390	0.11	+0.9
1,627,718	-		PS417_07390	0.11	+0.5
1,627,767	-				-0.2
1,628,104	+		PS417_07390	0.22	+0.5
1,628,105	-		PS417_07390	0.22	+0.2
1,628,105	-		PS417_07390	0.22	-1.6
1,628,105	-		PS417_07390	0.22	+0.5