Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3821

Experiment: m.b. Nickel (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 2 mM
4,564,123	+				-0.0
4,564,123	+				+0.1
4,564,124	-				+0.6
4,564,141	-				+0.2
4,564,142	+				-0.3
4,564,143	-				+0.5
4,564,244	-				+0.4
4,564,244	-				-0.2
4,564,249	+				-0.6
4,564,250	-				+1.1
4,564,250	-				-0.6
4,564,269	+				-0.4
4,564,332	-				+0.5
4,564,361	-				-1.4
4,564,371	+				-1.4
4,564,371	+				-1.0
4,564,381	-				-0.1
4,564,381	-				-0.6
4,564,381	-				-0.1
4,564,381	-				-1.5
4,564,385	+				-1.5
4,564,385	+				-1.4
4,564,386	-				+0.3
4,564,422	-				-0.4
4,564,431	-				+0.3
4,564,431	-				+0.2
4,564,437	-				-2.0
4,564,437	-				-0.9
4,564,437	-				-0.5
4,564,437	-				+0.2
4,564,437	-				-0.5
4,564,679	+				+0.9
4,564,780	-				+1.0
4,564,800	-				-1.0
4,564,800	-				-0.0
4,564,806	-				-1.2
4,564,806	-				-0.0
4,564,806	-				+0.1
4,564,806	-				-1.5
4,564,806	-				+0.4
4,564,806	-				+0.2
4,564,821	+				+0.6
4,564,822	-				+0.4
4,564,822	-				-0.4
4,564,822	-				-1.5
4,564,822	-				-0.6
4,564,824	-				-0.7
4,564,824	-				-1.9
4,564,824	-				-0.3
4,564,824	-				-1.3
4,564,824	-				-1.3
4,564,827	+				-0.9
4,564,828	-				+0.7
4,564,843	+				+0.9
4,564,892	+				-0.9
4,564,895	-				+0.8
4,564,902	+				+0.6
4,564,939	+				-0.4
4,564,939	+				+1.0
4,564,939	+				-0.6
4,564,939	+				-1.2
4,564,939	+				-0.7
4,564,939	+				-2.2
4,564,940	-				-0.0
4,564,940	-				+1.0
4,564,940	-				+0.5
4,564,940	-				-0.3
4,564,940	-				-0.7
4,564,971	+				-1.4
4,564,971	+				+0.5
4,564,971	+				+0.5
4,564,971	+				+0.4
4,564,971	+				+0.6
4,564,972	-				+1.7
4,564,972	-				+0.8
4,564,972	-				+0.2
4,564,972	-				+1.1
4,564,972	-				-0.1
4,564,973	+				+0.5
4,564,973	+				+0.2
4,564,974	-				+1.4
4,564,974	-				-0.8
4,565,082	+				-0.2
4,565,082	+				+0.7
4,565,082	+				-1.9
4,565,083	-				-1.3
4,565,083	-				-0.0
4,565,087	+				+0.6
4,565,088	-				-0.1
4,565,162	-				+1.3
4,565,206	+		Echvi_3821	0.14	+1.4
4,565,206	+		Echvi_3821	0.14	-0.5
4,565,207	-		Echvi_3821	0.14	-1.9
4,565,207	-		Echvi_3821	0.14	+0.3
4,565,288	+		Echvi_3821	0.23	-0.3
4,565,289	-		Echvi_3821	0.23	-1.5
4,565,373	+		Echvi_3821	0.33	+0.1
4,565,374	-		Echvi_3821	0.33	+0.2
4,565,528	-		Echvi_3821	0.51	+0.1
4,565,528	-		Echvi_3821	0.51	-0.1
4,565,635	-		Echvi_3821	0.63	+0.8
4,565,677	-		Echvi_3821	0.68	-0.2
4,565,679	-		Echvi_3821	0.68	-0.9
4,565,721	-		Echvi_3821	0.73	+0.1
4,565,815	+		Echvi_3821	0.84	-0.5
4,565,918	+				+0.2
4,565,919	-				-1.5
4,565,919	-				-2.2
4,565,921	-				+0.6
4,565,967	-				-0.1
4,566,007	+				-0.7
4,566,018	-				+1.7
4,566,073	-				-0.5
4,566,090	-				+0.5
4,566,118	-				-1.8
4,566,118	-				-0.4
4,566,118	-				+0.2
4,566,122	-				-1.0
4,566,122	-				-0.6
4,566,169	+				+0.5
4,566,169	+				-1.7
4,566,174	+				-1.0
4,566,175	-				+0.5
4,566,175	-				+0.0
4,566,245	+				-1.5
4,566,245	+				+1.1
4,566,245	+				-1.8
4,566,245	+				+0.7
4,566,245	+				+0.0
4,566,264	-				-0.2
4,566,264	-				+0.2
4,566,283	+				-0.6
4,566,290	+				-0.5
4,566,290	+				-0.3
4,566,291	-				-1.3
4,566,317	+				+2.3
4,566,318	-				-1.5
4,566,318	-				-0.7
4,566,364	+				+0.4
4,566,364	+				-1.1
4,566,364	+				+0.0
4,566,365	-				+0.8
4,566,396	+				+0.5
4,566,396	+				+0.0
4,566,396	+				+1.6
4,566,473	+		Echvi_3822	0.13	+0.6
4,566,559	+		Echvi_3822	0.19	-0.9
4,566,560	-		Echvi_3822	0.19	-0.2
4,566,567	+		Echvi_3822	0.20	-0.7
4,566,568	-		Echvi_3822	0.20	-0.1
4,566,568	-		Echvi_3822	0.20	+0.6
4,566,661	+		Echvi_3822	0.27	-0.2
4,566,662	-		Echvi_3822	0.27	+0.6
4,566,742	+		Echvi_3822	0.33	-1.8
4,566,743	-		Echvi_3822	0.33	-0.4
4,566,799	+		Echvi_3822	0.37	-0.3
4,566,829	+		Echvi_3822	0.39	-1.0
4,566,829	+		Echvi_3822	0.39	+1.0
4,566,889	+		Echvi_3822	0.43	+0.8
4,566,889	+		Echvi_3822	0.43	-0.5
4,566,890	-		Echvi_3822	0.44	+1.1