Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2852

Experiment: m.b. Nickel (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 2 mM
3,418,392	-				+0.2
3,418,474	+				+0.1
3,418,474	+				-0.4
3,418,474	+				-1.0
3,418,474	+				+1.2
3,418,474	+				+1.0
3,418,475	-				-0.2
3,418,475	-				-1.0
3,418,475	-				+0.3
3,418,476	+				-0.7
3,418,476	+				+0.3
3,418,476	+				-0.6
3,418,477	-				+0.1
3,418,493	+				+0.3
3,418,580	+				-0.9
3,418,581	-				-0.0
3,418,584	+				+0.1
3,418,585	-				-0.7
3,418,587	-				-1.4
3,418,593	+				-0.6
3,418,617	-				+0.1
3,418,632	+		Echvi_2851	0.11	+0.1
3,418,654	+		Echvi_2851	0.15	+1.0
3,418,713	-		Echvi_2851	0.27	-0.4
3,418,829	-		Echvi_2851	0.50	-1.9
3,418,842	+		Echvi_2851	0.52	+1.0
3,418,867	-		Echvi_2851	0.57	+0.3
3,418,941	-		Echvi_2851	0.72	-1.5
3,418,941	-		Echvi_2851	0.72	-0.8
3,418,941	-		Echvi_2851	0.72	-1.1
3,418,962	+		Echvi_2851	0.76	-0.5
3,418,962	+		Echvi_2851	0.76	-1.4
3,418,973	-		Echvi_2851	0.78	-0.9
3,418,973	-		Echvi_2851	0.78	-1.4
3,419,004	+		Echvi_2851	0.84	-0.2
3,419,005	-		Echvi_2851	0.84	-0.9
3,419,035	+				+0.1
3,419,069	+				+0.2
3,419,443	+		Echvi_2852	0.13	-0.8
3,419,444	-		Echvi_2852	0.13	-1.5
3,419,448	+		Echvi_2852	0.14	+0.1
3,419,448	+		Echvi_2852	0.14	+0.3
3,419,449	-		Echvi_2852	0.14	+0.4
3,419,449	-		Echvi_2852	0.14	+1.1
3,419,449	-		Echvi_2852	0.14	+0.3
3,419,473	-		Echvi_2852	0.18	-0.6
3,419,481	+		Echvi_2852	0.20	+0.3
3,419,481	+		Echvi_2852	0.20	-0.7
3,419,571	+		Echvi_2852	0.36	-0.9
3,419,571	+		Echvi_2852	0.36	-0.4
3,419,571	+		Echvi_2852	0.36	-3.1
3,419,588	-		Echvi_2852	0.39	+0.6
3,419,603	+		Echvi_2852	0.42	+0.1
3,419,604	-		Echvi_2852	0.42	-0.2
3,419,718	+		Echvi_2852	0.63	-0.9
3,419,737	+		Echvi_2852	0.66	-2.5
3,419,738	-		Echvi_2852	0.67	-0.2
3,419,782	+		Echvi_2852	0.75	+0.6
3,419,782	+		Echvi_2852	0.75	+0.8
3,419,812	+		Echvi_2852	0.80	+0.1
3,419,812	+		Echvi_2852	0.80	-0.2
3,419,847	+		Echvi_2852	0.87	-1.3
3,419,850	+		Echvi_2852	0.87	-2.1
3,419,851	-		Echvi_2852	0.87	+1.6
3,419,871	-				-0.3
3,419,916	-				-0.5
3,419,917	+				+0.1
3,419,917	+				-0.2
3,419,918	-				+0.6
3,419,949	-				-0.2
3,420,098	+				+0.9
3,420,139	-				-1.3
3,420,141	+				+1.0
3,420,367	-		Echvi_2853	0.26	+1.3
3,420,367	-		Echvi_2853	0.26	-1.4
3,420,484	+		Echvi_2853	0.38	-0.5
3,420,494	-		Echvi_2853	0.39	-0.8
3,420,494	-		Echvi_2853	0.39	-0.6
3,420,494	-		Echvi_2853	0.39	-0.8
3,420,498	+		Echvi_2853	0.40	-0.0
3,420,522	-		Echvi_2853	0.42	-2.2
3,420,527	-		Echvi_2853	0.43	-2.7
3,420,589	-		Echvi_2853	0.49	+0.1
3,420,589	-		Echvi_2853	0.49	-0.7
3,420,596	-		Echvi_2853	0.50	+0.4
3,420,622	-		Echvi_2853	0.53	-1.9
3,420,668	-		Echvi_2853	0.58	+0.6
3,420,672	-		Echvi_2853	0.58	+2.0
3,420,672	-		Echvi_2853	0.58	+0.2
3,420,673	+		Echvi_2853	0.58	+0.7
3,420,700	-		Echvi_2853	0.61	-1.2
3,420,792	+		Echvi_2853	0.71	-1.2
3,420,792	+		Echvi_2853	0.71	-0.7
3,420,792	+		Echvi_2853	0.71	+0.9
3,420,793	-		Echvi_2853	0.71	+0.4
3,420,795	-		Echvi_2853	0.71	-0.6
3,420,851	+		Echvi_2853	0.77	+0.3
3,420,852	-		Echvi_2853	0.77	+0.9
3,420,916	-		Echvi_2853	0.84	-0.7