Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2339

Experiment: m.b. Nickel (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 2 mM
2,774,889	-		Echvi_2338	0.12	-0.4
2,774,890	+		Echvi_2338	0.12	+0.1
2,774,890	+		Echvi_2338	0.12	-2.0
2,774,894	-		Echvi_2338	0.12	-0.2
2,774,948	-		Echvi_2338	0.17	+0.1
2,775,134	-		Echvi_2338	0.35	-1.5
2,775,183	-		Echvi_2338	0.40	-1.0
2,775,235	+		Echvi_2338	0.45	-1.0
2,775,236	-		Echvi_2338	0.45	-0.8
2,775,236	-		Echvi_2338	0.45	-1.6
2,775,282	-		Echvi_2338	0.50	-1.7
2,775,282	-		Echvi_2338	0.50	-1.6
2,775,299	+		Echvi_2338	0.51	-0.1
2,775,332	+		Echvi_2338	0.55	-0.1
2,775,368	+		Echvi_2338	0.58	+0.5
2,775,398	+		Echvi_2338	0.61	-1.6
2,775,398	+		Echvi_2338	0.61	-1.3
2,775,421	+		Echvi_2338	0.63	-0.0
2,775,422	-		Echvi_2338	0.63	-1.7
2,775,422	-		Echvi_2338	0.63	-2.3
2,775,422	-		Echvi_2338	0.63	-2.2
2,775,451	-		Echvi_2338	0.66	+0.1
2,775,483	+		Echvi_2338	0.69	+1.1
2,775,483	+		Echvi_2338	0.69	-2.2
2,775,555	+		Echvi_2338	0.76	-0.8
2,775,555	+		Echvi_2338	0.76	-1.5
2,775,558	-		Echvi_2338	0.77	+0.6
2,775,574	-		Echvi_2338	0.78	-2.8
2,775,596	+		Echvi_2338	0.80	+0.8
2,775,596	+		Echvi_2338	0.80	-1.9
2,775,602	-		Echvi_2338	0.81	-2.8
2,775,660	+		Echvi_2338	0.87	+0.4
2,775,664	+		Echvi_2338	0.87	-0.4
2,775,665	-		Echvi_2338	0.87	-1.4
2,775,665	-		Echvi_2338	0.87	-0.9
2,775,665	-		Echvi_2338	0.87	+1.3
2,775,750	+				-0.1
2,775,751	-				-2.7
2,775,755	+				-0.6
2,775,756	-				-1.4
2,775,768	+				-2.3
2,775,769	-				-2.6
2,775,770	+				-1.9
2,775,785	+				-0.7
2,775,786	-				-1.4
2,775,790	-				-0.2
2,775,796	+				-1.1
2,775,797	-				+0.6
2,775,797	-				+0.1
2,775,797	-				-0.3
2,775,821	+				-2.7
2,775,821	+				-0.4
2,775,821	+				-0.1
2,775,822	-				+0.6
2,775,864	-				-0.5
2,775,895	-				-0.3
2,775,895	-				-1.0
2,775,909	-				-1.6
2,775,921	+				+1.1
2,775,921	+				-1.5
2,775,922	-				+0.2
2,776,241	-		Echvi_2339	0.33	-1.3
2,776,452	-		Echvi_2339	0.49	-0.8
2,776,495	+		Echvi_2339	0.52	-2.3
2,776,496	-		Echvi_2339	0.52	+1.1
2,776,517	-		Echvi_2339	0.54	-1.8
2,776,517	-		Echvi_2339	0.54	-2.6
2,776,642	-		Echvi_2339	0.63	+0.9
2,776,737	-		Echvi_2339	0.71	-1.6
2,776,786	-		Echvi_2339	0.74	+0.3
2,777,134	-				-0.7
2,777,162	+				-3.4
2,777,175	-				-0.3
2,777,203	-				-0.7
2,777,214	-				+2.4
2,777,275	-				+0.3