Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0768 and Echvi_0769 are separated by 865 nucleotides Echvi_0769 and Echvi_0770 are separated by 465 nucleotides
Echvi_0768: Echvi_0768 - carbamoyl-phosphate synthase, large subunit, at 860,983 to 863,802
_0768
Echvi_0769: Echvi_0769 - hypothetical protein, at 864,668 to 866,284
_0769
Echvi_0770: Echvi_0770 - dihydrolipoamide dehydrogenase, at 866,750 to 868,234
_0770
Position (kb)
864
865
866
867 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 863.919 kb on + strand at 863.967 kb on - strand at 863.991 kb on + strand at 863.991 kb on + strand at 863.992 kb on - strand at 864.029 kb on + strand at 864.029 kb on + strand at 864.029 kb on + strand at 864.057 kb on - strand at 864.164 kb on - strand at 864.167 kb on + strand at 864.167 kb on + strand at 864.177 kb on - strand at 864.217 kb on + strand at 864.218 kb on - strand at 864.228 kb on + strand at 864.228 kb on + strand at 864.229 kb on - strand at 864.229 kb on - strand at 864.229 kb on - strand at 864.230 kb on + strand at 864.230 kb on + strand at 864.231 kb on - strand at 864.231 kb on - strand at 864.239 kb on - strand at 864.414 kb on - strand at 864.414 kb on - strand at 864.415 kb on + strand at 864.415 kb on + strand at 864.416 kb on - strand at 864.468 kb on - strand at 864.468 kb on - strand at 864.479 kb on - strand at 864.485 kb on + strand at 864.530 kb on + strand at 864.530 kb on + strand at 864.531 kb on - strand at 864.531 kb on - strand at 864.591 kb on + strand at 864.591 kb on + strand at 864.592 kb on - strand at 864.592 kb on - strand at 864.602 kb on + strand at 864.604 kb on + strand at 864.604 kb on + strand at 864.657 kb on - strand at 864.662 kb on + strand at 864.662 kb on + strand at 864.724 kb on + strand at 864.725 kb on + strand at 864.725 kb on + strand at 864.726 kb on - strand at 864.726 kb on - strand at 864.726 kb on - strand at 864.800 kb on - strand at 864.804 kb on + strand at 864.804 kb on + strand at 864.824 kb on + strand at 864.824 kb on + strand at 864.899 kb on - strand, within Echvi_0769 at 864.919 kb on + strand, within Echvi_0769 at 864.920 kb on - strand, within Echvi_0769 at 865.005 kb on + strand, within Echvi_0769 at 865.030 kb on + strand, within Echvi_0769 at 865.030 kb on + strand, within Echvi_0769 at 865.051 kb on + strand, within Echvi_0769 at 865.051 kb on + strand, within Echvi_0769 at 865.051 kb on + strand, within Echvi_0769 at 865.051 kb on + strand, within Echvi_0769 at 865.052 kb on - strand, within Echvi_0769 at 865.053 kb on + strand, within Echvi_0769 at 865.054 kb on - strand, within Echvi_0769 at 865.054 kb on - strand, within Echvi_0769 at 865.054 kb on - strand, within Echvi_0769 at 865.149 kb on + strand, within Echvi_0769 at 865.149 kb on + strand, within Echvi_0769 at 865.170 kb on + strand, within Echvi_0769 at 865.171 kb on - strand, within Echvi_0769 at 865.377 kb on + strand, within Echvi_0769 at 865.377 kb on + strand, within Echvi_0769 at 865.377 kb on + strand, within Echvi_0769 at 865.377 kb on + strand, within Echvi_0769 at 865.378 kb on - strand, within Echvi_0769 at 865.378 kb on - strand, within Echvi_0769 at 865.409 kb on + strand, within Echvi_0769 at 865.410 kb on - strand, within Echvi_0769 at 865.410 kb on - strand, within Echvi_0769 at 865.455 kb on + strand, within Echvi_0769 at 865.492 kb on + strand, within Echvi_0769 at 865.492 kb on + strand, within Echvi_0769 at 865.493 kb on - strand, within Echvi_0769 at 865.493 kb on - strand, within Echvi_0769 at 865.493 kb on - strand, within Echvi_0769 at 865.493 kb on - strand, within Echvi_0769 at 865.557 kb on + strand, within Echvi_0769 at 865.557 kb on + strand, within Echvi_0769 at 865.557 kb on + strand, within Echvi_0769 at 865.557 kb on + strand, within Echvi_0769 at 865.558 kb on - strand, within Echvi_0769 at 865.688 kb on - strand, within Echvi_0769 at 865.691 kb on + strand at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.691 kb on + strand, within Echvi_0769 at 865.692 kb on - strand, within Echvi_0769 at 865.692 kb on - strand, within Echvi_0769 at 865.692 kb on - strand, within Echvi_0769 at 865.692 kb on - strand, within Echvi_0769 at 865.692 kb on - strand, within Echvi_0769 at 865.692 kb on - strand, within Echvi_0769 at 865.695 kb on + strand, within Echvi_0769 at 865.696 kb on - strand, within Echvi_0769 at 865.696 kb on - strand, within Echvi_0769 at 865.729 kb on + strand, within Echvi_0769 at 865.729 kb on + strand, within Echvi_0769 at 865.729 kb on + strand, within Echvi_0769 at 865.729 kb on + strand, within Echvi_0769 at 865.729 kb on + strand, within Echvi_0769 at 865.729 kb on + strand, within Echvi_0769 at 865.730 kb on - strand, within Echvi_0769 at 865.751 kb on + strand, within Echvi_0769 at 865.751 kb on + strand, within Echvi_0769 at 865.751 kb on + strand, within Echvi_0769 at 865.752 kb on - strand, within Echvi_0769 at 865.752 kb on - strand, within Echvi_0769 at 865.778 kb on + strand, within Echvi_0769 at 865.778 kb on + strand, within Echvi_0769 at 865.818 kb on + strand, within Echvi_0769 at 865.819 kb on - strand, within Echvi_0769 at 865.819 kb on - strand, within Echvi_0769 at 865.820 kb on + strand, within Echvi_0769 at 865.821 kb on - strand, within Echvi_0769 at 865.821 kb on - strand, within Echvi_0769 at 865.821 kb on - strand, within Echvi_0769 at 865.821 kb on - strand, within Echvi_0769 at 865.825 kb on + strand, within Echvi_0769 at 865.825 kb on + strand, within Echvi_0769 at 865.825 kb on + strand, within Echvi_0769 at 865.826 kb on - strand, within Echvi_0769 at 865.916 kb on + strand, within Echvi_0769 at 865.918 kb on + strand, within Echvi_0769 at 865.918 kb on + strand, within Echvi_0769 at 865.919 kb on - strand, within Echvi_0769 at 865.919 kb on - strand, within Echvi_0769 at 865.924 kb on + strand, within Echvi_0769 at 865.924 kb on + strand, within Echvi_0769 at 865.935 kb on + strand, within Echvi_0769 at 865.936 kb on - strand, within Echvi_0769 at 865.940 kb on - strand, within Echvi_0769 at 865.940 kb on - strand, within Echvi_0769 at 865.951 kb on + strand, within Echvi_0769 at 865.951 kb on + strand, within Echvi_0769 at 865.952 kb on - strand, within Echvi_0769 at 865.956 kb on + strand, within Echvi_0769 at 865.956 kb on + strand, within Echvi_0769 at 865.956 kb on + strand, within Echvi_0769 at 865.965 kb on + strand, within Echvi_0769 at 865.965 kb on + strand, within Echvi_0769 at 865.965 kb on + strand, within Echvi_0769 at 865.965 kb on + strand, within Echvi_0769 at 865.965 kb on + strand, within Echvi_0769 at 865.965 kb on + strand, within Echvi_0769 at 865.971 kb on + strand, within Echvi_0769 at 865.971 kb on + strand, within Echvi_0769 at 865.972 kb on - strand, within Echvi_0769 at 865.972 kb on - strand, within Echvi_0769 at 865.972 kb on - strand, within Echvi_0769 at 866.024 kb on - strand, within Echvi_0769 at 866.024 kb on - strand, within Echvi_0769 at 866.024 kb on - strand, within Echvi_0769 at 866.033 kb on + strand, within Echvi_0769 at 866.033 kb on + strand, within Echvi_0769 at 866.034 kb on - strand, within Echvi_0769 at 866.117 kb on - strand, within Echvi_0769 at 866.117 kb on - strand, within Echvi_0769 at 866.137 kb on + strand at 866.138 kb on - strand at 866.146 kb on + strand at 866.159 kb on + strand at 866.159 kb on + strand at 866.160 kb on - strand at 866.228 kb on - strand at 866.267 kb on - strand at 866.267 kb on - strand at 866.267 kb on - strand at 866.267 kb on - strand at 866.613 kb on - strand at 866.632 kb on + strand at 866.632 kb on + strand at 866.683 kb on + strand at 866.684 kb on - strand at 866.684 kb on - strand at 866.684 kb on - strand at 866.735 kb on + strand at 866.735 kb on + strand at 866.736 kb on - strand at 866.752 kb on - strand at 866.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 863,919 + +1.3 863,967 - +0.5 863,991 + -0.4 863,991 + -0.1 863,992 - +0.6 864,029 + -0.1 864,029 + -0.2 864,029 + +0.1 864,057 - -0.2 864,164 - -0.8 864,167 + +0.8 864,167 + -1.6 864,177 - -1.2 864,217 + -1.4 864,218 - -0.3 864,228 + -0.7 864,228 + -2.0 864,229 - +0.1 864,229 - -1.6 864,229 - -1.1 864,230 + -0.2 864,230 + -1.1 864,231 - +0.3 864,231 - -2.8 864,239 - -0.3 864,414 - -0.9 864,414 - -0.4 864,415 + +0.1 864,415 + -2.0 864,416 - -0.5 864,468 - +1.4 864,468 - -1.6 864,479 - -0.2 864,485 + -1.3 864,530 + -0.9 864,530 + -0.6 864,531 - +0.3 864,531 - +0.8 864,591 + -1.4 864,591 + +0.4 864,592 - +0.7 864,592 - -1.6 864,602 + +0.5 864,604 + -0.0 864,604 + +0.4 864,657 - +0.0 864,662 + +0.4 864,662 + +0.4 864,724 + +0.9 864,725 + -0.4 864,725 + +0.6 864,726 - +1.7 864,726 - +0.9 864,726 - -0.2 864,800 - -0.2 864,804 + +0.2 864,804 + -1.8 864,824 + +0.9 864,824 + -0.2 864,899 - Echvi_0769 0.14 +1.2 864,919 + Echvi_0769 0.16 +0.8 864,920 - Echvi_0769 0.16 +2.9 865,005 + Echvi_0769 0.21 -1.1 865,030 + Echvi_0769 0.22 -0.1 865,030 + Echvi_0769 0.22 +0.8 865,051 + Echvi_0769 0.24 -1.3 865,051 + Echvi_0769 0.24 -1.3 865,051 + Echvi_0769 0.24 -1.3 865,051 + Echvi_0769 0.24 +0.4 865,052 - Echvi_0769 0.24 +2.2 865,053 + Echvi_0769 0.24 -0.6 865,054 - Echvi_0769 0.24 -1.8 865,054 - Echvi_0769 0.24 +0.4 865,054 - Echvi_0769 0.24 +0.9 865,149 + Echvi_0769 0.30 -1.9 865,149 + Echvi_0769 0.30 +1.6 865,170 + Echvi_0769 0.31 +0.9 865,171 - Echvi_0769 0.31 +0.9 865,377 + Echvi_0769 0.44 +1.5 865,377 + Echvi_0769 0.44 +0.8 865,377 + Echvi_0769 0.44 +1.2 865,377 + Echvi_0769 0.44 +1.2 865,378 - Echvi_0769 0.44 -1.8 865,378 - Echvi_0769 0.44 -1.2 865,409 + Echvi_0769 0.46 -1.8 865,410 - Echvi_0769 0.46 +1.3 865,410 - Echvi_0769 0.46 +0.6 865,455 + Echvi_0769 0.49 -0.5 865,492 + Echvi_0769 0.51 +2.6 865,492 + Echvi_0769 0.51 -0.6 865,493 - Echvi_0769 0.51 -0.2 865,493 - Echvi_0769 0.51 +1.4 865,493 - Echvi_0769 0.51 -1.0 865,493 - Echvi_0769 0.51 -1.6 865,557 + Echvi_0769 0.55 +0.3 865,557 + Echvi_0769 0.55 -0.4 865,557 + Echvi_0769 0.55 +0.2 865,557 + Echvi_0769 0.55 +0.5 865,558 - Echvi_0769 0.55 -0.7 865,688 - Echvi_0769 0.63 +1.2 865,691 + +0.4 865,691 + Echvi_0769 0.63 -0.9 865,691 + Echvi_0769 0.63 -0.6 865,691 + Echvi_0769 0.63 +0.7 865,691 + Echvi_0769 0.63 +0.8 865,691 + Echvi_0769 0.63 -0.2 865,691 + Echvi_0769 0.63 +0.9 865,691 + Echvi_0769 0.63 +0.5 865,691 + Echvi_0769 0.63 +0.2 865,691 + Echvi_0769 0.63 -0.4 865,692 - Echvi_0769 0.63 +0.7 865,692 - Echvi_0769 0.63 +0.2 865,692 - Echvi_0769 0.63 +1.1 865,692 - Echvi_0769 0.63 -0.1 865,692 - Echvi_0769 0.63 -0.2 865,692 - Echvi_0769 0.63 -0.8 865,695 + Echvi_0769 0.64 -0.6 865,696 - Echvi_0769 0.64 -0.7 865,696 - Echvi_0769 0.64 +0.3 865,729 + Echvi_0769 0.66 +0.2 865,729 + Echvi_0769 0.66 +1.6 865,729 + Echvi_0769 0.66 +0.2 865,729 + Echvi_0769 0.66 +0.0 865,729 + Echvi_0769 0.66 +0.7 865,729 + Echvi_0769 0.66 -0.5 865,730 - Echvi_0769 0.66 -0.2 865,751 + Echvi_0769 0.67 +1.4 865,751 + Echvi_0769 0.67 +1.4 865,751 + Echvi_0769 0.67 -1.9 865,752 - Echvi_0769 0.67 +0.2 865,752 - Echvi_0769 0.67 -1.7 865,778 + Echvi_0769 0.69 -1.3 865,778 + Echvi_0769 0.69 -1.9 865,818 + Echvi_0769 0.71 +1.1 865,819 - Echvi_0769 0.71 +1.7 865,819 - Echvi_0769 0.71 +0.4 865,820 + Echvi_0769 0.71 +1.4 865,821 - Echvi_0769 0.71 +0.6 865,821 - Echvi_0769 0.71 -0.1 865,821 - Echvi_0769 0.71 -0.3 865,821 - Echvi_0769 0.71 +1.6 865,825 + Echvi_0769 0.72 +0.1 865,825 + Echvi_0769 0.72 -0.4 865,825 + Echvi_0769 0.72 -1.2 865,826 - Echvi_0769 0.72 -0.3 865,916 + Echvi_0769 0.77 -0.0 865,918 + Echvi_0769 0.77 +0.3 865,918 + Echvi_0769 0.77 +0.2 865,919 - Echvi_0769 0.77 +0.3 865,919 - Echvi_0769 0.77 +1.0 865,924 + Echvi_0769 0.78 -1.9 865,924 + Echvi_0769 0.78 +0.5 865,935 + Echvi_0769 0.78 +1.1 865,936 - Echvi_0769 0.78 +0.7 865,940 - Echvi_0769 0.79 +0.2 865,940 - Echvi_0769 0.79 -0.4 865,951 + Echvi_0769 0.79 -0.2 865,951 + Echvi_0769 0.79 -0.3 865,952 - Echvi_0769 0.79 -1.4 865,956 + Echvi_0769 0.80 -1.2 865,956 + Echvi_0769 0.80 +0.0 865,956 + Echvi_0769 0.80 +0.3 865,965 + Echvi_0769 0.80 +0.1 865,965 + Echvi_0769 0.80 +0.2 865,965 + Echvi_0769 0.80 +0.9 865,965 + Echvi_0769 0.80 +0.9 865,965 + Echvi_0769 0.80 +1.0 865,965 + Echvi_0769 0.80 +1.1 865,971 + Echvi_0769 0.81 -1.2 865,971 + Echvi_0769 0.81 -0.3 865,972 - Echvi_0769 0.81 -1.1 865,972 - Echvi_0769 0.81 -1.2 865,972 - Echvi_0769 0.81 -0.6 866,024 - Echvi_0769 0.84 +1.8 866,024 - Echvi_0769 0.84 -0.2 866,024 - Echvi_0769 0.84 -0.4 866,033 + Echvi_0769 0.84 -0.9 866,033 + Echvi_0769 0.84 +2.1 866,034 - Echvi_0769 0.84 -0.4 866,117 - Echvi_0769 0.90 -1.1 866,117 - Echvi_0769 0.90 +0.9 866,137 + +0.2 866,138 - +0.4 866,146 + -0.8 866,159 + +0.4 866,159 + +1.1 866,160 - -1.3 866,228 - -0.4 866,267 - -0.5 866,267 - +0.9 866,267 - +1.4 866,267 - -1.6 866,613 - +1.9 866,632 + +1.6 866,632 + -1.6 866,683 + +0.1 866,684 - +0.2 866,684 - +0.2 866,684 - -0.8 866,735 + -0.8 866,735 + +1.5 866,736 - +0.6 866,752 - +0.3 866,752 - -0.1
Or see this region's nucleotide sequence