Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03424

Experiment: PYE no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE no stress control
3,589,282	-		CCNA_03422	0.77	+0.1
3,589,282	-		CCNA_03422	0.77	+0.1
3,589,312	+		CCNA_03422	0.79	+0.0
3,589,322	-		CCNA_03422	0.79	-0.1
3,589,322	-		CCNA_03422	0.79	+0.3
3,589,323	+		CCNA_03422	0.80	+0.6
3,589,327	-		CCNA_03422	0.80	-0.3
3,589,331	-		CCNA_03422	0.80	+0.2
3,589,331	-		CCNA_03422	0.80	-0.1
3,589,331	-		CCNA_03422	0.80	+0.5
3,589,334	+		CCNA_03422	0.80	+0.1
3,589,342	+		CCNA_03422	0.81	+0.0
3,589,350	-		CCNA_03422	0.81	-0.8
3,589,370	-		CCNA_03422	0.82	+0.0
3,589,394	+		CCNA_03422	0.83	-0.6
3,589,405	+		CCNA_03422	0.84	-1.4
3,589,413	-		CCNA_03422	0.85	+0.7
3,589,432	+		CCNA_03422	0.86	-0.1
3,589,454	+		CCNA_03422	0.87	-0.8
3,589,462	-		CCNA_03422	0.87	+0.3
3,589,614	-				+0.1
3,589,655	-				-0.0
3,589,670	+				-0.5
3,589,670	+				-0.5
3,589,678	-				-0.3
3,589,678	-				+0.1
3,589,678	-				-0.5
3,589,678	-				+0.1
3,589,678	-				+0.7
3,589,678	-				+0.6
3,589,678	-				-0.1
3,589,705	+				-0.3
3,589,729	+				-0.6
3,589,773	+		CCNA_03423	0.11	-0.9
3,589,808	-		CCNA_03423	0.20	-0.8
3,589,808	-		CCNA_03423	0.20	+0.4
3,589,878	-		CCNA_03423	0.38	+0.3
3,589,891	+		CCNA_03423	0.41	+0.0
3,589,899	-		CCNA_03423	0.43	-0.1
3,589,906	+		CCNA_03423	0.45	-0.4
3,589,909	-		CCNA_03423	0.46	-0.9
3,589,914	-		CCNA_03423	0.47	+1.3
3,589,914	-		CCNA_03423	0.47	+0.1
3,589,916	+		CCNA_03423	0.47	-0.5
3,589,924	-		CCNA_03423	0.49	+0.2
3,589,924	-		CCNA_03423	0.49	-0.9
3,589,929	-		CCNA_03423	0.51	-0.4
3,589,963	+		CCNA_03423	0.59	+0.1
3,589,971	-		CCNA_03423	0.62	-0.4
3,589,971	-		CCNA_03423	0.62	-0.2
3,589,971	-		CCNA_03423	0.62	-0.2
3,589,971	-		CCNA_03423	0.62	+0.9
3,589,971	-		CCNA_03423	0.62	+0.4
3,589,971	-		CCNA_03423	0.62	+0.2
3,589,971	-		CCNA_03423	0.62	-0.8
3,589,975	+		CCNA_03423	0.63	-1.5
3,589,977	-		CCNA_03423	0.63	-0.2
3,589,980	+		CCNA_03423	0.64	-0.1
3,589,983	-		CCNA_03423	0.65	-0.3
3,589,990	+		CCNA_03423	0.66	+0.8
3,589,990	+		CCNA_03423	0.66	-2.2
3,590,003	+		CCNA_03423	0.70	+1.3
3,590,049	+		CCNA_03423	0.82	+0.9
3,590,049	+		CCNA_03423	0.82	-1.6
3,590,049	+		CCNA_03423	0.82	+1.0
3,590,049	+		CCNA_03423	0.82	-0.7
3,590,049	+		CCNA_03423	0.82	+0.3
3,590,057	-		CCNA_03423	0.84	-0.6
3,590,057	-		CCNA_03423	0.84	-0.3
3,590,057	-		CCNA_03423	0.84	-2.1
3,590,057	-		CCNA_03423	0.84	+0.7
3,590,057	-		CCNA_03423	0.84	+0.5
3,590,089	+				-2.2
3,590,089	+				-0.1
3,590,092	+				-0.7
3,590,104	-				-0.8
3,590,140	+				-0.8
3,590,140	+				-0.1
3,590,140	+				+0.2
3,590,140	+				+0.9
3,590,140	+				-0.7
3,590,140	+				-0.3
3,590,140	+				-1.8
3,590,148	-				+0.8
3,590,148	-				+0.7
3,590,148	-				+0.3
3,590,148	-				-0.0
3,590,148	-				-1.7
3,590,148	-				-0.8
3,590,148	-				+0.0
3,590,148	-				+0.9
3,590,173	+				+0.2
3,590,190	+				-0.8
3,590,198	-				+0.5
3,590,203	-				-1.4
3,590,204	-				-0.7
3,590,212	+				+0.4
3,590,212	+				-0.2
3,590,213	-				-0.5
3,590,220	-				-0.4
3,590,237	+				-0.6
3,590,245	-				+0.0
3,590,285	+				-1.1
3,590,298	-				-0.8
3,590,316	+				-0.1
3,590,322	-				+0.8
3,590,330	+				-0.6
3,590,427	-		CCNA_03424	0.12	-2.5
3,590,479	-		CCNA_03424	0.15	-1.0
3,590,481	+		CCNA_03424	0.15	-0.7
3,590,489	-		CCNA_03424	0.16	-1.6
3,590,523	+		CCNA_03424	0.18	-0.6
3,590,531	-		CCNA_03424	0.19	-0.9
3,590,531	-		CCNA_03424	0.19	-3.0
3,590,531	-		CCNA_03424	0.19	-2.0
3,590,531	-		CCNA_03424	0.19	-0.2
3,590,630	-		CCNA_03424	0.26	-2.3
3,590,675	+		CCNA_03424	0.29	+0.0
3,590,675	+		CCNA_03424	0.29	+1.0
3,590,685	+		CCNA_03424	0.29	-1.2
3,590,700	+		CCNA_03424	0.30	-0.8
3,590,747	+		CCNA_03424	0.34	-0.7
3,590,791	+		CCNA_03424	0.37	-1.3
3,590,874	-		CCNA_03424	0.42	-0.8
3,590,943	-		CCNA_03424	0.47	-1.1
3,590,943	-		CCNA_03424	0.47	-0.1
3,590,945	+		CCNA_03424	0.47	-0.3
3,590,946	+		CCNA_03424	0.47	-1.1
3,590,946	+		CCNA_03424	0.47	-0.4
3,590,953	-		CCNA_03424	0.48	-1.0
3,590,971	-		CCNA_03424	0.49	-1.3
3,590,973	+		CCNA_03424	0.49	+0.2
3,591,012	+		CCNA_03424	0.52	-0.0
3,591,029	+		CCNA_03424	0.53	-0.5
3,591,031	+		CCNA_03424	0.53	-0.6
3,591,037	-		CCNA_03424	0.53	+1.2
3,591,314	+		CCNA_03424	0.72	-0.4
3,591,317	-		CCNA_03424	0.72	-3.0
3,591,322	-		CCNA_03424	0.73	-0.6
3,591,343	+		CCNA_03424	0.74	-0.2
3,591,389	+		CCNA_03424	0.77	-0.3
3,591,425	+		CCNA_03424	0.80	-0.6
3,591,435	+		CCNA_03424	0.81	-2.1
3,591,440	+		CCNA_03424	0.81	-0.7
3,591,488	-		CCNA_03424	0.84	-0.7
3,591,563	+		CCNA_03424	0.89	-1.5
3,591,563	+		CCNA_03424	0.89	+0.7
3,591,563	+		CCNA_03424	0.89	-0.1
3,591,563	+		CCNA_03424	0.89	+0.0
3,591,563	-		CCNA_03424	0.89	-1.4
3,591,606	+				-0.7
3,591,616	+				+0.8
3,591,632	-				+0.0
3,591,761	+		CCNA_03425	0.40	+1.3
3,591,761	+		CCNA_03425	0.40	-0.3
3,591,767	-		CCNA_03425	0.46	+0.2
3,591,769	-		CCNA_03425	0.48	-0.0
3,591,773	+		CCNA_03425	0.52	+1.2
3,591,773	+		CCNA_03425	0.52	-0.3
3,591,773	+		CCNA_03425	0.52	-0.5
3,591,773	+		CCNA_03425	0.52	+0.5
3,591,773	+		CCNA_03425	0.52	+1.0
3,591,773	+		CCNA_03425	0.52	+0.3
3,591,773	+		CCNA_03425	0.52	+0.5
3,591,773	+		CCNA_03425	0.52	+2.1
3,591,773	+		CCNA_03425	0.52	+0.1
3,591,773	+		CCNA_03425	0.52	-0.3
3,591,781	-		CCNA_03425	0.60	-0.1
3,591,781	-		CCNA_03425	0.60	+0.8
3,591,781	-		CCNA_03425	0.60	-0.1
3,591,781	-		CCNA_03425	0.60	-0.0
3,591,781	-		CCNA_03425	0.60	-0.1
3,591,781	-		CCNA_03425	0.60	+0.1
3,591,781	-		CCNA_03425	0.60	+0.4
3,591,781	-		CCNA_03425	0.60	+0.2
3,591,781	-		CCNA_03425	0.60	-0.3
3,591,781	-		CCNA_03425	0.60	-0.4
3,591,781	-		CCNA_03425	0.60	+0.0
3,591,781	-		CCNA_03425	0.60	-0.1
3,591,781	-		CCNA_03425	0.60	+0.1
3,591,869	+				+0.3
3,591,907	+		CCNA_03426	0.12	-0.9
3,591,954	+		CCNA_03426	0.22	+0.3
3,591,975	+		CCNA_03426	0.27	+0.8
3,592,013	+		CCNA_03426	0.35	-0.5
3,592,043	+		CCNA_03426	0.41	+0.0
3,592,043	+		CCNA_03426	0.41	-1.1
3,592,051	-		CCNA_03426	0.43	+0.3
3,592,051	-		CCNA_03426	0.43	+1.6
3,592,052	-		CCNA_03426	0.43	-0.1
3,592,074	-		CCNA_03426	0.48	+0.8
3,592,129	+		CCNA_03426	0.60	-0.4
3,592,137	-		CCNA_03426	0.62	+0.2
3,592,147	+		CCNA_03426	0.64	+0.4
3,592,149	+		CCNA_03426	0.64	-0.3
3,592,152	+		CCNA_03426	0.65	-0.8
3,592,152	-		CCNA_03426	0.65	+0.1
3,592,221	+		CCNA_03426	0.80	-0.0
3,592,239	-		CCNA_03426	0.83	+0.2
3,592,244	+		CCNA_03426	0.85	-0.1
3,592,251	+		CCNA_03426	0.86	-0.5
3,592,254	-		CCNA_03426	0.87	+0.5
3,592,259	-		CCNA_03426	0.88	+1.0
3,592,268	+		CCNA_03426	0.90	+0.7
3,592,334	+				+0.2
3,592,342	-				+1.0
3,592,421	-				+0.4
3,592,610	+				+0.6
3,592,618	-				+0.3
3,592,657	+		CCNA_03907	0.13	+0.8
3,592,694	+		CCNA_03907	0.24	-0.1
3,592,694	+		CCNA_03907	0.24	+0.3