Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03201

Experiment: PYE no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE no stress control
3,360,734	+		CCNA_03200	0.48	-0.3
3,360,734	+		CCNA_03200	0.48	+0.7
3,360,745	-		CCNA_03200	0.48	+0.4
3,360,747	+		CCNA_03200	0.49	-2.1
3,360,747	+		CCNA_03200	0.49	-0.7
3,360,754	+		CCNA_03200	0.49	-0.4
3,360,756	+		CCNA_03200	0.49	+0.4
3,360,762	-		CCNA_03200	0.49	+0.4
3,360,774	+		CCNA_03200	0.50	-0.9
3,360,774	+		CCNA_03200	0.50	+0.9
3,360,777	-		CCNA_03200	0.50	+0.5
3,360,789	+		CCNA_03200	0.51	+0.7
3,360,797	-		CCNA_03200	0.51	-0.1
3,360,805	-		CCNA_03200	0.52	+1.0
3,360,853	+		CCNA_03200	0.55	-0.1
3,360,855	-		CCNA_03200	0.55	+0.8
3,360,861	-		CCNA_03200	0.55	+0.3
3,360,861	-		CCNA_03200	0.55	+0.6
3,360,861	-		CCNA_03200	0.55	+0.2
3,360,871	-		CCNA_03200	0.56	-0.3
3,360,872	-		CCNA_03200	0.56	+0.4
3,360,943	-		CCNA_03200	0.60	+0.7
3,360,964	+		CCNA_03200	0.61	-0.1
3,360,964	+		CCNA_03200	0.61	+0.7
3,360,975	+		CCNA_03200	0.62	+0.2
3,360,999	+		CCNA_03200	0.63	-0.5
3,361,004	+		CCNA_03200	0.63	-3.1
3,361,004	+		CCNA_03200	0.63	-0.2
3,361,004	+		CCNA_03200	0.63	-1.7
3,361,012	-		CCNA_03200	0.64	-1.1
3,361,012	-		CCNA_03200	0.64	+0.3
3,361,086	+		CCNA_03200	0.68	-0.2
3,361,110	-		CCNA_03200	0.70	+0.0
3,361,162	-		CCNA_03200	0.73	-0.2
3,361,164	+		CCNA_03200	0.73	+0.1
3,361,164	+		CCNA_03200	0.73	-0.6
3,361,164	+		CCNA_03200	0.73	-1.6
3,361,172	-		CCNA_03200	0.73	+0.0
3,361,236	-		CCNA_03200	0.77	+0.4
3,361,254	+		CCNA_03200	0.78	-0.6
3,361,262	-		CCNA_03200	0.78	-1.0
3,361,262	-		CCNA_03200	0.78	+0.3
3,361,262	-		CCNA_03200	0.78	+2.7
3,361,262	-		CCNA_03200	0.78	+0.8
3,361,295	+		CCNA_03200	0.80	-0.3
3,361,299	+		CCNA_03200	0.81	-1.1
3,361,302	-		CCNA_03200	0.81	+1.7
3,361,317	-		CCNA_03200	0.82	+1.9
3,361,332	+		CCNA_03200	0.82	-1.9
3,361,332	+		CCNA_03200	0.82	+0.1
3,361,340	-		CCNA_03200	0.83	-0.3
3,361,350	-		CCNA_03200	0.83	-1.1
3,361,360	+		CCNA_03200	0.84	+0.1
3,361,368	-		CCNA_03200	0.85	-0.0
3,361,377	+		CCNA_03200	0.85	-0.8
3,361,385	-		CCNA_03200	0.86	+0.6
3,361,386	-		CCNA_03200	0.86	+0.4
3,361,387	+		CCNA_03200	0.86	+0.3
3,361,418	+		CCNA_03200	0.87	+1.0
3,361,453	-		CCNA_03200	0.89	+0.3
3,361,508	+				-0.6
3,361,562	-				-0.2
3,361,562	-				+0.1
3,361,582	+				-0.1
3,361,720	-				+0.9
3,361,766	-				+1.5
3,361,773	+				-2.1
3,361,773	+				-2.6
3,361,773	+				+0.7
3,361,773	+				-0.3
3,361,773	+				-0.8
3,361,773	+				-1.2
3,361,773	+				-0.4
3,361,773	+				-1.6
3,361,773	+				-2.2
3,361,773	+				-2.7
3,361,778	+				-0.1
3,361,781	-				-0.7
3,361,781	-				-0.4
3,361,781	-				-1.5
3,361,781	-				-1.7
3,361,781	-				-0.6
3,361,781	-				+0.2
3,361,783	+				-1.6
3,361,786	-				-0.5
3,361,792	-				+0.2
3,361,792	-				-0.5
3,361,803	-				+1.1
3,361,808	-				-0.8
3,361,813	-				-1.0
3,361,818	+				-2.5
3,361,823	-				-2.3
3,361,852	+				-0.2
3,361,875	-		CCNA_03201	0.11	-1.3
3,361,918	-		CCNA_03201	0.14	-1.0
3,361,946	+		CCNA_03201	0.17	-0.7
3,361,968	-		CCNA_03201	0.18	-0.2
3,361,968	-		CCNA_03201	0.18	-0.7
3,362,006	-		CCNA_03201	0.21	-0.9
3,362,033	-		CCNA_03201	0.23	-0.0
3,362,035	+		CCNA_03201	0.24	-1.9
3,362,043	-		CCNA_03201	0.24	-0.8
3,362,090	+		CCNA_03201	0.28	-1.1
3,362,099	-		CCNA_03201	0.29	-1.9
3,362,100	+		CCNA_03201	0.29	-0.1
3,362,144	-		CCNA_03201	0.32	-1.3
3,362,150	+		CCNA_03201	0.32	-1.4
3,362,157	+		CCNA_03201	0.33	-0.2
3,362,158	-		CCNA_03201	0.33	-0.6
3,362,199	-		CCNA_03201	0.36	-0.6
3,362,216	+		CCNA_03201	0.38	-0.9
3,362,216	+		CCNA_03201	0.38	-2.9
3,362,216	+		CCNA_03201	0.38	+0.2
3,362,216	+		CCNA_03201	0.38	-1.7
3,362,216	+		CCNA_03201	0.38	-3.8
3,362,216	+		CCNA_03201	0.38	+0.7
3,362,216	+		CCNA_03201	0.38	-1.4
3,362,216	+		CCNA_03201	0.38	-1.7
3,362,224	-		CCNA_03201	0.38	+0.1
3,362,224	-		CCNA_03201	0.38	-1.8
3,362,224	-		CCNA_03201	0.38	-1.1
3,362,233	+		CCNA_03201	0.39	-1.1
3,362,238	+		CCNA_03201	0.39	-1.2
3,362,238	+		CCNA_03201	0.39	-1.2
3,362,260	+		CCNA_03201	0.41	-1.3
3,362,265	+		CCNA_03201	0.41	-0.7
3,362,273	-		CCNA_03201	0.42	-0.7
3,362,289	-		CCNA_03201	0.43	-0.3
3,362,297	+		CCNA_03201	0.44	+0.7
3,362,305	-		CCNA_03201	0.45	-0.7
3,362,340	-		CCNA_03201	0.47	-0.8
3,362,392	+		CCNA_03201	0.51	+0.2
3,362,393	+		CCNA_03201	0.51	+1.1
3,362,401	-		CCNA_03201	0.52	-0.2
3,362,401	-		CCNA_03201	0.52	-0.5
3,362,403	+		CCNA_03201	0.52	-1.3
3,362,423	+		CCNA_03201	0.54	-0.7
3,362,423	+		CCNA_03201	0.54	-0.9
3,362,447	+		CCNA_03201	0.56	+0.1
3,362,493	+		CCNA_03201	0.59	-0.0
3,362,493	+		CCNA_03201	0.59	-1.3
3,362,493	+		CCNA_03201	0.59	+0.3
3,362,493	+		CCNA_03201	0.59	-1.3
3,362,493	+		CCNA_03201	0.59	-2.0
3,362,501	-		CCNA_03201	0.60	-0.9
3,362,501	-		CCNA_03201	0.60	-0.8
3,362,501	-		CCNA_03201	0.60	-0.4
3,362,548	-		CCNA_03201	0.63	-0.3
3,362,563	-		CCNA_03201	0.65	-0.2
3,362,600	+		CCNA_03201	0.67	-1.7
3,362,608	-		CCNA_03201	0.68	+0.3
3,362,647	+		CCNA_03201	0.71	-0.5
3,362,647	+		CCNA_03201	0.71	-0.9
3,362,676	+		CCNA_03201	0.73	-1.1
3,362,677	+		CCNA_03201	0.73	-2.2
3,362,685	-		CCNA_03201	0.74	-0.5
3,362,689	+		CCNA_03201	0.74	-2.7
3,362,706	+		CCNA_03201	0.76	-1.7
3,362,708	-		CCNA_03201	0.76	-0.4
3,362,720	+		CCNA_03201	0.77	+1.7
3,362,733	+		CCNA_03201	0.78	-3.2
3,362,738	+		CCNA_03201	0.78	-0.7
3,362,747	+		CCNA_03201	0.79	-0.7
3,362,747	+		CCNA_03201	0.79	-0.9
3,362,755	-		CCNA_03201	0.79	+1.0
3,362,755	-		CCNA_03201	0.79	-0.9
3,362,785	-		CCNA_03201	0.82	-0.8
3,362,833	+		CCNA_03201	0.86	-1.9
3,362,833	+		CCNA_03201	0.86	-1.1
3,362,854	-		CCNA_03201	0.87	-0.1
3,362,854	-		CCNA_03201	0.87	-0.9
3,362,867	+		CCNA_03201	0.88	-1.6
3,362,874	-		CCNA_03201	0.89	-0.8
3,362,875	-		CCNA_03201	0.89	-1.9
3,362,913	-				-0.4
3,362,926	-				-1.5
3,362,994	-				-1.7
3,363,024	+				-1.6
3,363,030	+				-1.4
3,363,055	+				-1.4
3,363,071	+				-1.1
3,363,071	+				-3.5
3,363,081	-				+0.5
3,363,140	-				+0.3
3,363,146	+				+0.7
3,363,170	-				+0.3
3,363,179	+				+0.1
3,363,184	+				+0.4
3,363,201	+				-0.9
3,363,212	+		CCNA_03202	0.12	-1.2
3,363,224	+		CCNA_03202	0.14	+2.4
3,363,224	+		CCNA_03202	0.14	+0.3
3,363,224	+		CCNA_03202	0.14	-0.7
3,363,224	+		CCNA_03202	0.14	-1.7
3,363,224	+		CCNA_03202	0.14	-1.2
3,363,224	+		CCNA_03202	0.14	-2.0
3,363,224	+		CCNA_03202	0.14	+0.0
3,363,224	+		CCNA_03202	0.14	-1.3
3,363,224	+		CCNA_03202	0.14	-1.0
3,363,224	+		CCNA_03202	0.14	-0.7
3,363,224	+		CCNA_03202	0.14	-1.7
3,363,224	+		CCNA_03202	0.14	-0.7
3,363,224	+		CCNA_03202	0.14	-0.1
3,363,224	+		CCNA_03202	0.14	+0.1
3,363,224	+		CCNA_03202	0.14	-0.3
3,363,224	+		CCNA_03202	0.14	+0.3
3,363,224	+		CCNA_03202	0.14	-0.5
3,363,224	+		CCNA_03202	0.14	-1.6
3,363,224	+		CCNA_03202	0.14	-2.5
3,363,224	+		CCNA_03202	0.14	+0.9
3,363,224	-		CCNA_03202	0.14	+1.5
3,363,232	-		CCNA_03202	0.15	+0.2
3,363,232	-		CCNA_03202	0.15	+0.6
3,363,232	-		CCNA_03202	0.15	+0.5
3,363,232	-		CCNA_03202	0.15	-0.4
3,363,232	-		CCNA_03202	0.15	+1.2
3,363,232	-		CCNA_03202	0.15	+0.2
3,363,232	-		CCNA_03202	0.15	+1.3
3,363,232	-		CCNA_03202	0.15	-1.2
3,363,232	-		CCNA_03202	0.15	+0.3
3,363,232	-		CCNA_03202	0.15	+0.1
3,363,232	-		CCNA_03202	0.15	+0.3
3,363,232	-		CCNA_03202	0.15	+0.8
3,363,232	-		CCNA_03202	0.15	-0.2
3,363,232	-		CCNA_03202	0.15	-0.8
3,363,232	-		CCNA_03202	0.15	-1.1
3,363,232	-		CCNA_03202	0.15	-0.2
3,363,232	-		CCNA_03202	0.15	+0.3
3,363,232	-		CCNA_03202	0.15	+0.1
3,363,232	-		CCNA_03202	0.15	-0.4
3,363,232	-		CCNA_03202	0.15	+0.5
3,363,232	-		CCNA_03202	0.15	-0.7
3,363,232	-		CCNA_03202	0.15	+1.5
3,363,232	-		CCNA_03202	0.15	+1.0
3,363,232	-		CCNA_03202	0.15	-1.0
3,363,232	-		CCNA_03202	0.15	+0.7
3,363,232	-		CCNA_03202	0.15	+0.4
3,363,232	-		CCNA_03202	0.15	-0.8
3,363,232	-		CCNA_03202	0.15	+0.3
3,363,232	-		CCNA_03202	0.15	-0.0
3,363,232	-		CCNA_03202	0.15	+0.7
3,363,247	-		CCNA_03202	0.17	+0.2
3,363,247	-		CCNA_03202	0.17	+0.2
3,363,247	-		CCNA_03202	0.17	+1.0
3,363,266	-		CCNA_03202	0.20	-0.5
3,363,271	+		CCNA_03202	0.21	-1.9
3,363,271	+		CCNA_03202	0.21	-2.5
3,363,289	-		CCNA_03202	0.24	-0.6
3,363,307	-		CCNA_03202	0.27	-0.3
3,363,319	-		CCNA_03202	0.29	+0.6
3,363,323	-		CCNA_03202	0.29	-0.0
3,363,348	+		CCNA_03202	0.33	-1.5
3,363,348	+		CCNA_03202	0.33	-0.4
3,363,397	-		CCNA_03202	0.41	+0.2
3,363,401	+		CCNA_03202	0.42	-1.3
3,363,401	+		CCNA_03202	0.42	-1.4
3,363,401	+		CCNA_03202	0.42	-1.2
3,363,401	+		CCNA_03202	0.42	-0.6
3,363,401	+		CCNA_03202	0.42	+0.1
3,363,401	+		CCNA_03202	0.42	+0.1
3,363,401	+		CCNA_03202	0.42	+0.3
3,363,409	-		CCNA_03202	0.43	-0.3
3,363,409	-		CCNA_03202	0.43	+0.0
3,363,409	-		CCNA_03202	0.43	+0.5
3,363,409	-		CCNA_03202	0.43	-0.6
3,363,409	-		CCNA_03202	0.43	+0.2
3,363,409	-		CCNA_03202	0.43	-1.6
3,363,409	-		CCNA_03202	0.43	-0.6
3,363,409	-		CCNA_03202	0.43	+0.7
3,363,409	-		CCNA_03202	0.43	-0.6
3,363,409	-		CCNA_03202	0.43	+0.2
3,363,409	-		CCNA_03202	0.43	-0.5
3,363,409	-		CCNA_03202	0.43	-1.8
3,363,409	-		CCNA_03202	0.43	+0.8
3,363,414	-		CCNA_03202	0.44	-0.8
3,363,414	-		CCNA_03202	0.44	-0.1
3,363,414	-		CCNA_03202	0.44	+2.7
3,363,420	-		CCNA_03202	0.45	-0.0
3,363,447	+		CCNA_03202	0.49	-0.2
3,363,503	+		CCNA_03202	0.58	+0.9
3,363,521	+		CCNA_03202	0.61	-0.0
3,363,528	-		CCNA_03202	0.62	-0.0
3,363,529	-		CCNA_03202	0.62	+0.5
3,363,585	-		CCNA_03202	0.71	+0.1
3,363,586	+		CCNA_03202	0.71	-0.4
3,363,621	+		CCNA_03202	0.77	-1.1
3,363,696	-		CCNA_03202	0.89	+0.3
3,363,723	+				-0.7
3,363,731	-				+0.6
3,363,731	-				-0.5
3,363,731	-				-0.1
3,363,733	+				+0.9
3,363,769	+				+0.3
3,363,769	+				+0.1
3,363,769	+				-0.9
3,363,777	-				+0.3
3,363,779	+				+0.8
3,363,779	+				-0.4
3,363,779	+				-1.1
3,363,779	+				+0.2
3,363,779	+				-2.1
3,363,779	+				-0.0
3,363,787	-				-0.0
3,363,787	-				+1.8
3,363,787	-				-0.3
3,363,787	-				+0.4
3,363,787	-				+0.4
3,363,787	-				-0.0
3,363,787	-				+0.1
3,363,846	+				-0.4
3,363,851	+				-1.2
3,363,851	+				+1.0
3,363,858	+				-0.0
3,363,858	+				-0.3
3,363,859	-				-1.0
3,363,866	-				-0.8
3,363,866	-				-0.3
3,363,866	-				-0.4
3,363,890	-				-0.5
3,363,909	-				-1.1
3,363,916	+				-1.3
3,363,946	+				+0.8
3,363,954	-				+1.3
3,363,959	+				-0.4
3,363,967	-		CCNA_03203	0.11	+0.0
3,363,984	+		CCNA_03203	0.12	+1.7
3,363,986	-		CCNA_03203	0.13	-0.5
3,363,992	-		CCNA_03203	0.13	-0.8