Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03071

Experiment: PYE no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE no stress control
3,220,524	+		CCNA_03068	0.72	-0.6
3,220,526	-		CCNA_03068	0.72	-0.7
3,220,533	-		CCNA_03068	0.73	-0.5
3,220,537	+		CCNA_03068	0.74	+0.5
3,220,558	+		CCNA_03068	0.77	-1.4
3,220,609	-		CCNA_03068	0.85	-0.0
3,220,629	+		CCNA_03068	0.88	-1.1
3,220,630	+		CCNA_03068	0.89	+0.5
3,220,630	+		CCNA_03068	0.89	-1.8
3,220,630	+		CCNA_03068	0.89	-1.1
3,220,630	+		CCNA_03068	0.89	-1.1
3,220,630	+		CCNA_03068	0.89	-1.1
3,220,638	-		CCNA_03068	0.90	-1.1
3,220,672	+				-0.4
3,220,715	+				+0.1
3,220,749	+		CCNA_03069	0.14	-2.0
3,220,749	+		CCNA_03069	0.14	-0.2
3,220,749	+		CCNA_03069	0.14	+1.0
3,220,749	+		CCNA_03069	0.14	+0.0
3,220,749	+		CCNA_03069	0.14	-0.6
3,220,749	+		CCNA_03069	0.14	-0.1
3,220,749	+		CCNA_03069	0.14	-0.2
3,220,757	-		CCNA_03069	0.16	-0.4
3,220,757	-		CCNA_03069	0.16	-0.1
3,220,757	-		CCNA_03069	0.16	-1.4
3,220,757	-		CCNA_03069	0.16	-1.0
3,220,791	-		CCNA_03069	0.25	+0.2
3,220,860	-		CCNA_03069	0.44	-1.1
3,220,945	+		CCNA_03069	0.66	+1.1
3,220,973	+		CCNA_03069	0.74	-0.7
3,221,070	+				+0.2
3,221,070	+				+0.4
3,221,070	+				-0.1
3,221,078	-				+0.1
3,221,083	-				-2.4
3,221,114	-		CCNA_03070	0.19	-0.6
3,221,129	-		CCNA_03070	0.26	-0.9
3,221,152	-		CCNA_03070	0.37	-0.1
3,221,174	-		CCNA_03070	0.47	-1.3
3,221,174	-		CCNA_03070	0.47	-0.3
3,221,270	-				-1.1
3,221,316	-				+0.3
3,221,339	+				-0.7
3,221,367	+				+0.1
3,221,367	+				-0.0
3,221,367	+				+0.7
3,221,440	-				-1.3
3,221,482	+				-0.2
3,221,482	+				+0.4
3,221,490	-				-0.8
3,221,490	-				+0.0
3,221,516	-				+0.2
3,221,518	+				-0.1
3,221,625	+				+0.5
3,221,641	-		CCNA_03071	0.11	-0.5
3,221,743	+		CCNA_03071	0.19	+0.2
3,221,743	+		CCNA_03071	0.19	+0.8
3,221,751	-		CCNA_03071	0.19	-0.9
3,221,751	-		CCNA_03071	0.19	+0.1
3,221,786	+		CCNA_03071	0.22	-1.0
3,221,787	+		CCNA_03071	0.22	-0.2
3,221,787	+		CCNA_03071	0.22	-0.6
3,221,794	-		CCNA_03071	0.23	-0.4
3,221,795	-		CCNA_03071	0.23	-0.9
3,221,796	-		CCNA_03071	0.23	-1.2
3,221,803	+		CCNA_03071	0.23	+0.4
3,221,806	-		CCNA_03071	0.24	-1.1
3,221,830	-		CCNA_03071	0.25	+0.2
3,221,834	-		CCNA_03071	0.26	+0.6
3,221,867	+		CCNA_03071	0.28	+0.5
3,221,875	-		CCNA_03071	0.29	+0.2
3,221,924	+		CCNA_03071	0.33	-0.2
3,221,932	-		CCNA_03071	0.33	+0.5
3,221,932	-		CCNA_03071	0.33	-0.2
3,221,944	+		CCNA_03071	0.34	-0.0
3,221,944	+		CCNA_03071	0.34	+0.3
3,221,944	+		CCNA_03071	0.34	-0.9
3,221,944	+		CCNA_03071	0.34	+2.0
3,221,944	+		CCNA_03071	0.34	-0.1
3,221,944	+		CCNA_03071	0.34	+0.1
3,221,952	-		CCNA_03071	0.35	+0.4
3,221,952	-		CCNA_03071	0.35	-0.4
3,221,952	-		CCNA_03071	0.35	-0.2
3,221,952	-		CCNA_03071	0.35	-0.3
3,221,952	-		CCNA_03071	0.35	-1.8
3,222,002	-		CCNA_03071	0.39	-0.0
3,222,006	+		CCNA_03071	0.39	-0.6
3,222,017	+		CCNA_03071	0.40	-1.2
3,222,019	+		CCNA_03071	0.40	+0.9
3,222,023	+		CCNA_03071	0.41	-0.0
3,222,041	-		CCNA_03071	0.42	-0.5
3,222,079	+		CCNA_03071	0.45	-0.4
3,222,087	-		CCNA_03071	0.46	-0.5
3,222,094	+		CCNA_03071	0.46	+0.3
3,222,102	-		CCNA_03071	0.47	-1.2
3,222,102	-		CCNA_03071	0.47	+0.4
3,222,122	-		CCNA_03071	0.48	+0.1
3,222,153	+		CCNA_03071	0.51	-0.4
3,222,161	-		CCNA_03071	0.51	+0.1
3,222,161	-		CCNA_03071	0.51	+0.1
3,222,161	-		CCNA_03071	0.51	-0.0
3,222,201	+		CCNA_03071	0.55	+0.7
3,222,216	+		CCNA_03071	0.56	+0.0
3,222,216	+		CCNA_03071	0.56	-0.3
3,222,218	+		CCNA_03071	0.56	+0.1
3,222,228	+		CCNA_03071	0.57	+0.2
3,222,228	+		CCNA_03071	0.57	+0.4
3,222,228	+		CCNA_03071	0.57	-0.3
3,222,236	-		CCNA_03071	0.57	+0.2
3,222,244	-		CCNA_03071	0.58	-1.2
3,222,327	+		CCNA_03071	0.64	-2.2
3,222,327	+		CCNA_03071	0.64	+0.4
3,222,327	+		CCNA_03071	0.64	+2.4
3,222,335	-		CCNA_03071	0.65	-1.3
3,222,380	+		CCNA_03071	0.69	-0.8
3,222,380	-		CCNA_03071	0.69	-0.7
3,222,408	+		CCNA_03071	0.71	-0.2
3,222,436	-		CCNA_03071	0.73	+0.6
3,222,441	-		CCNA_03071	0.73	-1.4
3,222,471	+		CCNA_03071	0.76	+0.2
3,222,472	+		CCNA_03071	0.76	-1.0
3,222,477	+		CCNA_03071	0.76	-0.7
3,222,479	-		CCNA_03071	0.76	-1.7
3,222,495	-		CCNA_03071	0.78	+0.3
3,222,504	-		CCNA_03071	0.78	-0.2
3,222,521	-		CCNA_03071	0.80	-0.7
3,222,523	+		CCNA_03071	0.80	-0.9
3,222,585	-		CCNA_03071	0.85	-0.2
3,222,603	+		CCNA_03071	0.86	-0.8
3,222,603	+		CCNA_03071	0.86	-0.1
3,222,620	-		CCNA_03071	0.87	+0.3
3,222,639	+		CCNA_03071	0.89	+0.4
3,222,742	+				+0.7
3,222,754	+				-0.9
3,222,762	-				+0.1
3,222,770	+				-3.0
3,222,770	+				-0.5
3,222,778	-				-0.4
3,222,778	-				-0.3
3,222,778	-				+0.1
3,222,783	+				-1.1
3,222,790	+				-0.4
3,222,790	-				+0.3
3,222,800	-				-0.3
3,222,814	-				+0.7
3,222,835	+				+0.2
3,222,866	+				+1.2
3,222,906	+				-1.2
3,223,182	+		CCNA_03072	0.46	+0.3
3,223,214	-		CCNA_03072	0.50	-1.2
3,223,259	+		CCNA_03072	0.57	-2.0
3,223,414	+		CCNA_03072	0.79	-0.3
3,223,422	-		CCNA_03072	0.80	+0.1
3,223,513	+				+0.5
3,223,513	+				-0.4
3,223,518	+				-0.0
3,223,521	-				-0.1
3,223,521	-				-1.9
3,223,523	-				-0.9
3,223,528	+				+0.2
3,223,536	-				+0.9
3,223,545	-				+0.4
3,223,566	-				-1.0
3,223,578	+				-0.5
3,223,578	+				-0.4
3,223,578	+				-0.2
3,223,586	-				+0.1
3,223,586	-				+2.1
3,223,586	-				+0.5
3,223,586	-				+0.3
3,223,647	-				-2.2
3,223,660	+				-0.3
3,223,682	+				-1.7
3,223,734	+		CCNA_03073	0.18	+0.2
3,223,734	+		CCNA_03073	0.18	-1.2
3,223,734	+		CCNA_03073	0.18	-0.0
3,223,739	+		CCNA_03073	0.18	-0.7
3,223,742	-		CCNA_03073	0.19	-2.8
3,223,742	-		CCNA_03073	0.19	-0.5
3,223,742	-		CCNA_03073	0.19	-1.1
3,223,749	-		CCNA_03073	0.20	+1.0