Experiment: PYE no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02643 and CCNA_02644 overlap by 4 nucleotides CCNA_02644 and CCNA_02645 overlap by 4 nucleotides CCNA_02645 and CCNA_02646 overlap by 4 nucleotides
CCNA_02643: CCNA_02643 - penicillin-binding protein FtsI, at 2,796,353 to 2,798,122
_02643
CCNA_02644: CCNA_02644 - cell division protein FtsL, at 2,798,119 to 2,798,562
_02644
CCNA_02645: CCNA_02645 - S-adenosyl-methyltransferase MraW, at 2,798,559 to 2,799,494
_02645
CCNA_02646: CCNA_02646 - cell division protein MraZ, at 2,799,491 to 2,799,961
_02646
Position (kb)
2798
2799
2800 Strain fitness (log2 ratio)
-2
-1
0
1 at 2798.130 kb on - strand at 2798.198 kb on + strand, within CCNA_02644 at 2798.231 kb on + strand, within CCNA_02644 at 2798.239 kb on - strand, within CCNA_02644 at 2798.239 kb on - strand, within CCNA_02644 at 2798.239 kb on - strand, within CCNA_02644 at 2798.580 kb on - strand at 2798.715 kb on - strand, within CCNA_02645 at 2798.810 kb on + strand, within CCNA_02645 at 2798.928 kb on - strand, within CCNA_02645 at 2799.078 kb on - strand, within CCNA_02645 at 2799.093 kb on - strand, within CCNA_02645 at 2799.105 kb on - strand, within CCNA_02645 at 2799.477 kb on - strand at 2799.504 kb on + strand at 2799.534 kb on - strand at 2799.702 kb on + strand, within CCNA_02646 at 2799.707 kb on - strand, within CCNA_02646 at 2799.707 kb on - strand, within CCNA_02646 at 2799.789 kb on - strand, within CCNA_02646 at 2799.834 kb on - strand, within CCNA_02646 at 2799.842 kb on - strand, within CCNA_02646 at 2799.966 kb on + strand at 2799.966 kb on + strand at 2799.973 kb on - strand at 2800.221 kb on + strand at 2800.244 kb on + strand at 2800.318 kb on + strand at 2800.326 kb on - strand at 2800.326 kb on - strand at 2800.326 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction PYE no stress control remove 2,798,130 - -0.3 2,798,198 + CCNA_02644 0.18 -0.5 2,798,231 + CCNA_02644 0.25 +0.1 2,798,239 - CCNA_02644 0.27 -0.8 2,798,239 - CCNA_02644 0.27 +0.0 2,798,239 - CCNA_02644 0.27 +0.1 2,798,580 - +0.9 2,798,715 - CCNA_02645 0.17 -1.1 2,798,810 + CCNA_02645 0.27 +0.4 2,798,928 - CCNA_02645 0.39 -0.0 2,799,078 - CCNA_02645 0.55 -0.3 2,799,093 - CCNA_02645 0.57 -0.9 2,799,105 - CCNA_02645 0.58 +0.4 2,799,477 - +0.4 2,799,504 + -0.3 2,799,534 - -0.1 2,799,702 + CCNA_02646 0.45 -0.5 2,799,707 - CCNA_02646 0.46 -0.2 2,799,707 - CCNA_02646 0.46 +0.6 2,799,789 - CCNA_02646 0.63 -0.1 2,799,834 - CCNA_02646 0.73 +0.0 2,799,842 - CCNA_02646 0.75 -0.6 2,799,966 + -1.2 2,799,966 + -1.8 2,799,973 - -0.2 2,800,221 + +0.1 2,800,244 + -1.1 2,800,318 + +0.1 2,800,326 - +0.4 2,800,326 - +0.4 2,800,326 - +0.6
Or see this region's nucleotide sequence