Experiment: PYE no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02093 and CCNA_02094 are separated by 29 nucleotides CCNA_02094 and CCNA_02095 are separated by 118 nucleotides
CCNA_02093: CCNA_02093 - hypothetical protein, at 2,240,848 to 2,242,695
_02093
CCNA_02094: CCNA_02094 - MviM-like NAD-dependent oxidoreductase, at 2,242,725 to 2,243,642
_02094
CCNA_02095: CCNA_02095 - NAD/NADH-dependent eicosanoid dehydrogenase, at 2,243,761 to 2,244,786
_02095
Position (kb)
2242
2243
2244 Strain fitness (log2 ratio)
-2
-1
0
1 at 2241.765 kb on + strand, within CCNA_02093 at 2241.773 kb on - strand, within CCNA_02093 at 2241.778 kb on - strand, within CCNA_02093 at 2241.802 kb on - strand, within CCNA_02093 at 2241.961 kb on + strand, within CCNA_02093 at 2242.073 kb on + strand, within CCNA_02093 at 2242.100 kb on + strand, within CCNA_02093 at 2242.128 kb on + strand, within CCNA_02093 at 2242.128 kb on + strand, within CCNA_02093 at 2242.136 kb on - strand, within CCNA_02093 at 2242.176 kb on - strand, within CCNA_02093 at 2242.186 kb on + strand, within CCNA_02093 at 2242.239 kb on - strand, within CCNA_02093 at 2242.258 kb on + strand, within CCNA_02093 at 2242.266 kb on - strand, within CCNA_02093 at 2242.279 kb on + strand, within CCNA_02093 at 2242.287 kb on - strand, within CCNA_02093 at 2242.287 kb on - strand, within CCNA_02093 at 2242.292 kb on - strand, within CCNA_02093 at 2242.293 kb on + strand, within CCNA_02093 at 2242.298 kb on + strand, within CCNA_02093 at 2242.370 kb on + strand, within CCNA_02093 at 2242.372 kb on + strand, within CCNA_02093 at 2242.377 kb on + strand, within CCNA_02093 at 2242.380 kb on - strand, within CCNA_02093 at 2242.395 kb on - strand, within CCNA_02093 at 2242.416 kb on - strand, within CCNA_02093 at 2242.535 kb on - strand at 2242.559 kb on + strand at 2242.559 kb on + strand at 2242.559 kb on + strand at 2242.567 kb on - strand at 2242.643 kb on - strand at 2242.661 kb on - strand at 2242.680 kb on + strand at 2242.729 kb on - strand at 2242.796 kb on - strand at 2242.858 kb on + strand, within CCNA_02094 at 2242.957 kb on + strand, within CCNA_02094 at 2243.005 kb on + strand, within CCNA_02094 at 2243.015 kb on - strand, within CCNA_02094 at 2243.143 kb on - strand, within CCNA_02094 at 2243.164 kb on - strand, within CCNA_02094 at 2243.265 kb on - strand, within CCNA_02094 at 2243.353 kb on + strand, within CCNA_02094 at 2243.398 kb on + strand, within CCNA_02094 at 2243.501 kb on - strand, within CCNA_02094 at 2243.560 kb on - strand at 2243.632 kb on + strand at 2243.646 kb on + strand at 2243.646 kb on - strand at 2243.651 kb on + strand at 2243.651 kb on + strand at 2243.682 kb on + strand at 2243.692 kb on + strand at 2243.739 kb on + strand at 2243.739 kb on + strand at 2243.739 kb on + strand at 2243.747 kb on - strand at 2243.747 kb on - strand at 2243.823 kb on - strand at 2243.835 kb on - strand at 2243.847 kb on - strand at 2243.874 kb on + strand, within CCNA_02095 at 2243.874 kb on + strand, within CCNA_02095 at 2243.968 kb on + strand, within CCNA_02095 at 2244.023 kb on - strand, within CCNA_02095 at 2244.023 kb on - strand, within CCNA_02095 at 2244.055 kb on + strand, within CCNA_02095 at 2244.139 kb on + strand, within CCNA_02095 at 2244.179 kb on - strand, within CCNA_02095 at 2244.180 kb on + strand, within CCNA_02095 at 2244.201 kb on - strand, within CCNA_02095 at 2244.252 kb on - strand, within CCNA_02095 at 2244.293 kb on - strand, within CCNA_02095 at 2244.320 kb on - strand, within CCNA_02095 at 2244.379 kb on + strand, within CCNA_02095 at 2244.383 kb on + strand, within CCNA_02095 at 2244.391 kb on - strand, within CCNA_02095 at 2244.405 kb on + strand, within CCNA_02095 at 2244.405 kb on + strand, within CCNA_02095 at 2244.405 kb on + strand, within CCNA_02095 at 2244.405 kb on + strand, within CCNA_02095 at 2244.405 kb on + strand, within CCNA_02095 at 2244.405 kb on + strand, within CCNA_02095 at 2244.413 kb on - strand, within CCNA_02095 at 2244.413 kb on - strand, within CCNA_02095 at 2244.413 kb on - strand, within CCNA_02095 at 2244.427 kb on + strand, within CCNA_02095 at 2244.462 kb on + strand, within CCNA_02095 at 2244.482 kb on - strand, within CCNA_02095 at 2244.500 kb on + strand, within CCNA_02095 at 2244.518 kb on - strand, within CCNA_02095 at 2244.518 kb on - strand, within CCNA_02095
Per-strain Table
Position Strand Gene LocusTag Fraction PYE no stress control remove 2,241,765 + CCNA_02093 0.50 +0.7 2,241,773 - CCNA_02093 0.50 +1.3 2,241,778 - CCNA_02093 0.50 -0.6 2,241,802 - CCNA_02093 0.52 -0.7 2,241,961 + CCNA_02093 0.60 -0.7 2,242,073 + CCNA_02093 0.66 +0.2 2,242,100 + CCNA_02093 0.68 +0.3 2,242,128 + CCNA_02093 0.69 +0.5 2,242,128 + CCNA_02093 0.69 +0.1 2,242,136 - CCNA_02093 0.70 -1.5 2,242,176 - CCNA_02093 0.72 +0.1 2,242,186 + CCNA_02093 0.72 +0.3 2,242,239 - CCNA_02093 0.75 -0.1 2,242,258 + CCNA_02093 0.76 +0.5 2,242,266 - CCNA_02093 0.77 +0.1 2,242,279 + CCNA_02093 0.77 -0.3 2,242,287 - CCNA_02093 0.78 -2.2 2,242,287 - CCNA_02093 0.78 -0.5 2,242,292 - CCNA_02093 0.78 -0.1 2,242,293 + CCNA_02093 0.78 -1.4 2,242,298 + CCNA_02093 0.78 +0.4 2,242,370 + CCNA_02093 0.82 +0.4 2,242,372 + CCNA_02093 0.82 +0.8 2,242,377 + CCNA_02093 0.83 +0.3 2,242,380 - CCNA_02093 0.83 -0.0 2,242,395 - CCNA_02093 0.84 -1.0 2,242,416 - CCNA_02093 0.85 +0.6 2,242,535 - +0.3 2,242,559 + +0.3 2,242,559 + +0.4 2,242,559 + -0.1 2,242,567 - +0.1 2,242,643 - +0.3 2,242,661 - +0.1 2,242,680 + +0.8 2,242,729 - +0.3 2,242,796 - -0.2 2,242,858 + CCNA_02094 0.14 -0.7 2,242,957 + CCNA_02094 0.25 -1.0 2,243,005 + CCNA_02094 0.31 +0.7 2,243,015 - CCNA_02094 0.32 +0.7 2,243,143 - CCNA_02094 0.46 -0.6 2,243,164 - CCNA_02094 0.48 -0.6 2,243,265 - CCNA_02094 0.59 +1.7 2,243,353 + CCNA_02094 0.68 +0.7 2,243,398 + CCNA_02094 0.73 -1.8 2,243,501 - CCNA_02094 0.85 -0.1 2,243,560 - -0.7 2,243,632 + -0.9 2,243,646 + -0.8 2,243,646 - +0.9 2,243,651 + -0.5 2,243,651 + +1.3 2,243,682 + +0.3 2,243,692 + +0.4 2,243,739 + -0.1 2,243,739 + +0.4 2,243,739 + -0.4 2,243,747 - -0.6 2,243,747 - +0.6 2,243,823 - +0.4 2,243,835 - -0.1 2,243,847 - +0.0 2,243,874 + CCNA_02095 0.11 +0.1 2,243,874 + CCNA_02095 0.11 -1.5 2,243,968 + CCNA_02095 0.20 +0.5 2,244,023 - CCNA_02095 0.26 -0.4 2,244,023 - CCNA_02095 0.26 -2.0 2,244,055 + CCNA_02095 0.29 +0.5 2,244,139 + CCNA_02095 0.37 -0.9 2,244,179 - CCNA_02095 0.41 +1.7 2,244,180 + CCNA_02095 0.41 -0.7 2,244,201 - CCNA_02095 0.43 +1.1 2,244,252 - CCNA_02095 0.48 +0.6 2,244,293 - CCNA_02095 0.52 +0.7 2,244,320 - CCNA_02095 0.54 -0.3 2,244,379 + CCNA_02095 0.60 +1.1 2,244,383 + CCNA_02095 0.61 +1.1 2,244,391 - CCNA_02095 0.61 -0.6 2,244,405 + CCNA_02095 0.63 -0.2 2,244,405 + CCNA_02095 0.63 +0.3 2,244,405 + CCNA_02095 0.63 +0.2 2,244,405 + CCNA_02095 0.63 -0.4 2,244,405 + CCNA_02095 0.63 +0.1 2,244,405 + CCNA_02095 0.63 -2.0 2,244,413 - CCNA_02095 0.64 +0.7 2,244,413 - CCNA_02095 0.64 -1.4 2,244,413 - CCNA_02095 0.64 +0.6 2,244,427 + CCNA_02095 0.65 +0.3 2,244,462 + CCNA_02095 0.68 +0.2 2,244,482 - CCNA_02095 0.70 -0.2 2,244,500 + CCNA_02095 0.72 -0.3 2,244,518 - CCNA_02095 0.74 +0.4 2,244,518 - CCNA_02095 0.74 -0.2
Or see this region's nucleotide sequence