Experiment: PYE no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_00293 and CCNA_00294 are separated by 59 nucleotides CCNA_00294 and CCNA_00295 are separated by 25 nucleotides CCNA_00295 and CCNA_00296 are separated by 21 nucleotides
CCNA_00293: CCNA_00293 - phosphate transport system permease protein pstA, at 307,455 to 308,750
_00293
CCNA_00294: CCNA_00294 - phosphate transport ATP-binding protein pstB, at 308,810 to 309,634
_00294
CCNA_00295: CCNA_00295 - phosphate transport system protein phoU, at 309,660 to 310,352
_00295
CCNA_00296: CCNA_00296 - phosphate regulon response regulator PhoB, at 310,374 to 311,066
_00296
Position (kb) 308
309
310 Strain fitness (log2 ratio) -2
-1
0
1 at 308.124 kb on + strand, within CCNA_00293 at 308.136 kb on + strand, within CCNA_00293 at 308.172 kb on - strand, within CCNA_00293 at 308.258 kb on + strand, within CCNA_00293 at 308.442 kb on + strand, within CCNA_00293 at 308.652 kb on - strand at 308.687 kb on - strand at 308.751 kb on - strand at 308.804 kb on - strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.806 kb on + strand at 308.814 kb on - strand at 308.814 kb on - strand at 308.814 kb on - strand at 308.814 kb on - strand at 308.814 kb on - strand at 308.895 kb on - strand, within CCNA_00294 at 309.045 kb on + strand, within CCNA_00294 at 309.248 kb on + strand, within CCNA_00294 at 309.550 kb on + strand, within CCNA_00294 at 310.316 kb on - strand at 310.331 kb on + strand at 310.332 kb on - strand at 310.346 kb on - strand at 310.361 kb on - strand at 310.394 kb on + strand at 310.403 kb on - strand at 310.418 kb on - strand at 310.485 kb on + strand, within CCNA_00296 at 310.493 kb on - strand, within CCNA_00296 at 310.493 kb on - strand, within CCNA_00296 at 310.495 kb on + strand, within CCNA_00296 at 310.498 kb on - strand, within CCNA_00296 at 310.510 kb on + strand, within CCNA_00296 at 310.525 kb on + strand, within CCNA_00296 at 310.547 kb on + strand, within CCNA_00296 at 310.548 kb on + strand, within CCNA_00296 at 310.549 kb on - strand, within CCNA_00296 at 310.556 kb on - strand, within CCNA_00296 at 310.602 kb on + strand, within CCNA_00296
Per-strain Table
Position Strand Gene LocusTag Fraction PYE no stress control remove 308,124 + CCNA_00293 0.52 -1.3 308,136 + CCNA_00293 0.53 -1.5 308,172 - CCNA_00293 0.55 +0.6 308,258 + CCNA_00293 0.62 -0.6 308,442 + CCNA_00293 0.76 -0.6 308,652 - +0.3 308,687 - -1.1 308,751 - +0.0 308,804 - +0.9 308,806 + -0.0 308,806 + -0.6 308,806 + +0.2 308,806 + +0.1 308,806 + +1.2 308,806 + +0.8 308,806 + +0.9 308,806 + -0.2 308,814 - -1.6 308,814 - -0.6 308,814 - -0.3 308,814 - -0.7 308,814 - -0.8 308,895 - CCNA_00294 0.10 +0.0 309,045 + CCNA_00294 0.28 -1.0 309,248 + CCNA_00294 0.53 -1.9 309,550 + CCNA_00294 0.90 -1.7 310,316 - -0.1 310,331 + +1.7 310,332 - +0.6 310,346 - -0.0 310,361 - -1.0 310,394 + +1.0 310,403 - -2.1 310,418 - +0.3 310,485 + CCNA_00296 0.16 -0.7 310,493 - CCNA_00296 0.17 -1.1 310,493 - CCNA_00296 0.17 +0.3 310,495 + CCNA_00296 0.17 +0.6 310,498 - CCNA_00296 0.18 -1.3 310,510 + CCNA_00296 0.20 -2.2 310,525 + CCNA_00296 0.22 -1.6 310,547 + CCNA_00296 0.25 +0.3 310,548 + CCNA_00296 0.25 -1.9 310,549 - CCNA_00296 0.25 -1.1 310,556 - CCNA_00296 0.26 +0.7 310,602 + CCNA_00296 0.33 -1.6
Or see this region's nucleotide sequence