Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16775 and CA264_16780 are separated by 64 nucleotides CA264_16780 and CA264_16785 are separated by 135 nucleotides
CA264_16775: CA264_16775 - metal-dependent hydrolase, at 3,911,346 to 3,912,116
_16775
CA264_16780: CA264_16780 - methylenetetrahydrofolate reductase [NAD(P)H], at 3,912,181 to 3,913,137
_16780
CA264_16785: CA264_16785 - methionine synthase, at 3,913,273 to 3,916,986
_16785
Position (kb)
3912
3913
3914 Strain fitness (log2 ratio)
-2
-1
0
1 at 3911.189 kb on - strand at 3911.189 kb on - strand at 3911.316 kb on + strand at 3911.317 kb on - strand at 3911.320 kb on + strand at 3911.321 kb on - strand at 3911.321 kb on - strand at 3911.321 kb on - strand at 3911.323 kb on - strand at 3911.357 kb on + strand at 3911.361 kb on - strand at 3911.364 kb on + strand at 3911.380 kb on - strand at 3911.388 kb on - strand at 3911.472 kb on + strand, within CA264_16775 at 3911.532 kb on + strand, within CA264_16775 at 3911.532 kb on + strand, within CA264_16775 at 3911.533 kb on - strand, within CA264_16775 at 3911.533 kb on - strand, within CA264_16775 at 3911.617 kb on + strand, within CA264_16775 at 3911.617 kb on + strand, within CA264_16775 at 3911.618 kb on - strand, within CA264_16775 at 3911.621 kb on + strand, within CA264_16775 at 3911.622 kb on - strand, within CA264_16775 at 3911.622 kb on - strand, within CA264_16775 at 3911.622 kb on - strand, within CA264_16775 at 3911.771 kb on + strand, within CA264_16775 at 3911.800 kb on - strand, within CA264_16775 at 3911.844 kb on + strand, within CA264_16775 at 3911.845 kb on - strand, within CA264_16775 at 3911.893 kb on + strand, within CA264_16775 at 3911.977 kb on + strand, within CA264_16775 at 3911.991 kb on + strand, within CA264_16775 at 3911.992 kb on - strand, within CA264_16775 at 3912.120 kb on - strand at 3912.140 kb on + strand at 3912.141 kb on - strand at 3912.141 kb on - strand at 3912.161 kb on + strand at 3912.162 kb on - strand at 3912.162 kb on - strand at 3912.162 kb on - strand at 3912.169 kb on + strand at 3912.182 kb on + strand at 3912.233 kb on + strand at 3912.237 kb on - strand at 3912.394 kb on + strand, within CA264_16780 at 3912.394 kb on + strand, within CA264_16780 at 3912.394 kb on + strand, within CA264_16780 at 3912.395 kb on - strand at 3912.482 kb on + strand, within CA264_16780 at 3912.482 kb on + strand, within CA264_16780 at 3912.511 kb on + strand, within CA264_16780 at 3912.512 kb on - strand, within CA264_16780 at 3912.660 kb on - strand, within CA264_16780 at 3912.708 kb on - strand, within CA264_16780 at 3912.711 kb on + strand, within CA264_16780 at 3912.711 kb on + strand, within CA264_16780 at 3912.712 kb on - strand, within CA264_16780 at 3912.780 kb on + strand, within CA264_16780 at 3912.780 kb on + strand, within CA264_16780 at 3912.781 kb on - strand, within CA264_16780 at 3912.781 kb on - strand, within CA264_16780 at 3912.784 kb on + strand, within CA264_16780 at 3912.873 kb on + strand, within CA264_16780 at 3912.873 kb on + strand, within CA264_16780 at 3912.874 kb on - strand, within CA264_16780 at 3912.874 kb on - strand, within CA264_16780 at 3912.874 kb on - strand, within CA264_16780 at 3912.875 kb on + strand, within CA264_16780 at 3912.875 kb on + strand, within CA264_16780 at 3912.876 kb on - strand, within CA264_16780 at 3912.876 kb on - strand, within CA264_16780 at 3912.927 kb on + strand, within CA264_16780 at 3912.965 kb on + strand, within CA264_16780 at 3912.966 kb on - strand, within CA264_16780 at 3912.966 kb on - strand, within CA264_16780 at 3913.030 kb on + strand, within CA264_16780 at 3913.031 kb on - strand, within CA264_16780 at 3913.032 kb on + strand, within CA264_16780 at 3913.079 kb on - strand at 3913.089 kb on + strand at 3913.090 kb on - strand at 3913.158 kb on + strand at 3913.161 kb on - strand at 3913.161 kb on - strand at 3913.167 kb on + strand at 3913.168 kb on - strand at 3913.168 kb on - strand at 3913.168 kb on - strand at 3913.168 kb on - strand at 3913.168 kb on - strand at 3913.181 kb on + strand at 3913.182 kb on - strand at 3913.222 kb on + strand at 3913.223 kb on - strand at 3913.231 kb on + strand at 3913.241 kb on - strand at 3913.268 kb on + strand at 3913.269 kb on - strand at 3913.275 kb on - strand at 3913.275 kb on - strand at 3913.308 kb on - strand at 3913.412 kb on + strand at 3913.413 kb on - strand at 3913.436 kb on + strand at 3913.483 kb on - strand at 3913.486 kb on + strand at 3913.489 kb on - strand at 3913.543 kb on - strand at 3913.698 kb on + strand, within CA264_16785 at 3913.752 kb on - strand, within CA264_16785 at 3913.807 kb on - strand, within CA264_16785 at 3913.808 kb on + strand, within CA264_16785 at 3913.808 kb on + strand, within CA264_16785 at 3913.809 kb on - strand, within CA264_16785 at 3913.943 kb on - strand, within CA264_16785 at 3914.021 kb on - strand, within CA264_16785
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 3,911,189 - -0.1 3,911,189 - -0.5 3,911,316 + -0.3 3,911,317 - +0.0 3,911,320 + -0.7 3,911,321 - +0.1 3,911,321 - -0.5 3,911,321 - -0.6 3,911,323 - +0.7 3,911,357 + +0.4 3,911,361 - +0.9 3,911,364 + -0.1 3,911,380 - +0.1 3,911,388 - -0.8 3,911,472 + CA264_16775 0.16 +0.9 3,911,532 + CA264_16775 0.24 +0.2 3,911,532 + CA264_16775 0.24 -0.5 3,911,533 - CA264_16775 0.24 -0.1 3,911,533 - CA264_16775 0.24 -0.8 3,911,617 + CA264_16775 0.35 +0.3 3,911,617 + CA264_16775 0.35 +0.6 3,911,618 - CA264_16775 0.35 -0.4 3,911,621 + CA264_16775 0.36 -0.4 3,911,622 - CA264_16775 0.36 -1.9 3,911,622 - CA264_16775 0.36 -0.2 3,911,622 - CA264_16775 0.36 +0.0 3,911,771 + CA264_16775 0.55 -0.4 3,911,800 - CA264_16775 0.59 -1.4 3,911,844 + CA264_16775 0.65 -0.0 3,911,845 - CA264_16775 0.65 -0.4 3,911,893 + CA264_16775 0.71 -0.1 3,911,977 + CA264_16775 0.82 -1.0 3,911,991 + CA264_16775 0.84 -0.2 3,911,992 - CA264_16775 0.84 +0.1 3,912,120 - +0.7 3,912,140 + +1.1 3,912,141 - +0.4 3,912,141 - -0.5 3,912,161 + -0.1 3,912,162 - +0.5 3,912,162 - -1.0 3,912,162 - -1.0 3,912,169 + +0.3 3,912,182 + -0.7 3,912,233 + +0.1 3,912,237 - -0.0 3,912,394 + CA264_16780 0.22 +0.2 3,912,394 + CA264_16780 0.22 +0.7 3,912,394 + CA264_16780 0.22 -0.3 3,912,395 - +0.7 3,912,482 + CA264_16780 0.31 +0.2 3,912,482 + CA264_16780 0.31 +1.5 3,912,511 + CA264_16780 0.34 +0.3 3,912,512 - CA264_16780 0.35 +0.4 3,912,660 - CA264_16780 0.50 -0.1 3,912,708 - CA264_16780 0.55 -0.2 3,912,711 + CA264_16780 0.55 -0.5 3,912,711 + CA264_16780 0.55 +1.7 3,912,712 - CA264_16780 0.55 -1.4 3,912,780 + CA264_16780 0.63 -1.0 3,912,780 + CA264_16780 0.63 -1.7 3,912,781 - CA264_16780 0.63 -2.4 3,912,781 - CA264_16780 0.63 -0.5 3,912,784 + CA264_16780 0.63 +0.0 3,912,873 + CA264_16780 0.72 -0.7 3,912,873 + CA264_16780 0.72 +0.3 3,912,874 - CA264_16780 0.72 +0.3 3,912,874 - CA264_16780 0.72 -0.3 3,912,874 - CA264_16780 0.72 +0.4 3,912,875 + CA264_16780 0.73 -0.4 3,912,875 + CA264_16780 0.73 +0.6 3,912,876 - CA264_16780 0.73 -0.1 3,912,876 - CA264_16780 0.73 -1.0 3,912,927 + CA264_16780 0.78 -0.1 3,912,965 + CA264_16780 0.82 -0.1 3,912,966 - CA264_16780 0.82 -0.2 3,912,966 - CA264_16780 0.82 -1.5 3,913,030 + CA264_16780 0.89 +0.6 3,913,031 - CA264_16780 0.89 -0.3 3,913,032 + CA264_16780 0.89 -0.9 3,913,079 - -0.3 3,913,089 + -0.7 3,913,090 - +0.1 3,913,158 + +0.3 3,913,161 - +0.0 3,913,161 - -0.7 3,913,167 + -1.5 3,913,168 - -0.5 3,913,168 - -0.7 3,913,168 - -1.9 3,913,168 - +0.5 3,913,168 - +0.4 3,913,181 + -0.4 3,913,182 - -0.6 3,913,222 + +1.0 3,913,223 - -0.5 3,913,231 + -0.7 3,913,241 - -0.7 3,913,268 + +1.0 3,913,269 - -0.2 3,913,275 - -1.0 3,913,275 - +0.0 3,913,308 - -0.7 3,913,412 + +0.0 3,913,413 - +0.5 3,913,436 + +0.1 3,913,483 - +0.6 3,913,486 + -0.3 3,913,489 - -2.0 3,913,543 - -0.5 3,913,698 + CA264_16785 0.11 -2.7 3,913,752 - CA264_16785 0.13 +0.3 3,913,807 - CA264_16785 0.14 -0.0 3,913,808 + CA264_16785 0.14 -0.0 3,913,808 + CA264_16785 0.14 +0.4 3,913,809 - CA264_16785 0.14 -0.6 3,913,943 - CA264_16785 0.18 -1.9 3,914,021 - CA264_16785 0.20 +0.2
Or see this region's nucleotide sequence