Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09725 and CA264_09730 are separated by 62 nucleotides CA264_09730 and CA264_09735 are separated by 16 nucleotides
CA264_09725: CA264_09725 - cAMP-binding protein, at 2,259,415 to 2,259,984
_09725
CA264_09730: CA264_09730 - hypothetical protein, at 2,260,047 to 2,260,592
_09730
CA264_09735: CA264_09735 - 5-hydroxyisourate hydrolase, at 2,260,609 to 2,261,016
_09735
Position (kb)
2260
2261 Strain fitness (log2 ratio)
-2
-1
0
1 at 2259.074 kb on + strand at 2259.107 kb on - strand at 2259.169 kb on - strand at 2259.175 kb on + strand at 2259.175 kb on + strand at 2259.176 kb on - strand at 2259.176 kb on - strand at 2259.177 kb on + strand at 2259.177 kb on + strand at 2259.178 kb on - strand at 2259.178 kb on - strand at 2259.178 kb on - strand at 2259.178 kb on - strand at 2259.180 kb on + strand at 2259.180 kb on + strand at 2259.180 kb on + strand at 2259.181 kb on - strand at 2259.187 kb on - strand at 2259.199 kb on - strand at 2259.241 kb on + strand at 2259.241 kb on + strand at 2259.265 kb on + strand at 2259.266 kb on - strand at 2259.458 kb on + strand at 2259.473 kb on + strand, within CA264_09725 at 2259.473 kb on + strand, within CA264_09725 at 2259.483 kb on - strand, within CA264_09725 at 2259.483 kb on - strand, within CA264_09725 at 2259.556 kb on + strand, within CA264_09725 at 2259.557 kb on - strand, within CA264_09725 at 2259.559 kb on + strand, within CA264_09725 at 2259.695 kb on - strand, within CA264_09725 at 2259.767 kb on + strand, within CA264_09725 at 2259.785 kb on + strand, within CA264_09725 at 2259.786 kb on - strand, within CA264_09725 at 2259.955 kb on - strand at 2259.955 kb on - strand at 2259.959 kb on + strand at 2259.959 kb on + strand at 2259.996 kb on + strand at 2260.027 kb on - strand at 2260.027 kb on - strand at 2260.083 kb on - strand at 2260.174 kb on + strand, within CA264_09730 at 2260.205 kb on - strand, within CA264_09730 at 2260.211 kb on - strand, within CA264_09730 at 2260.217 kb on + strand, within CA264_09730 at 2260.292 kb on + strand, within CA264_09730 at 2260.354 kb on - strand, within CA264_09730 at 2260.354 kb on - strand, within CA264_09730 at 2260.354 kb on - strand, within CA264_09730 at 2260.580 kb on - strand at 2260.580 kb on - strand at 2260.580 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.626 kb on - strand at 2260.626 kb on - strand at 2260.945 kb on - strand, within CA264_09735 at 2260.961 kb on - strand, within CA264_09735 at 2261.201 kb on + strand at 2261.336 kb on + strand at 2261.336 kb on + strand at 2261.436 kb on + strand at 2261.502 kb on - strand at 2261.514 kb on + strand at 2261.514 kb on + strand at 2261.534 kb on + strand at 2261.563 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 2,259,074 + -0.1 2,259,107 - +0.2 2,259,169 - +0.4 2,259,175 + +0.3 2,259,175 + +1.0 2,259,176 - +0.1 2,259,176 - +0.8 2,259,177 + -0.3 2,259,177 + -0.6 2,259,178 - -0.1 2,259,178 - -0.5 2,259,178 - +1.2 2,259,178 - -0.3 2,259,180 + -0.5 2,259,180 + -1.0 2,259,180 + -1.4 2,259,181 - -0.2 2,259,187 - -0.1 2,259,199 - +0.2 2,259,241 + -0.7 2,259,241 + +0.1 2,259,265 + -0.6 2,259,266 - +0.4 2,259,458 + -1.9 2,259,473 + CA264_09725 0.10 -0.1 2,259,473 + CA264_09725 0.10 -0.1 2,259,483 - CA264_09725 0.12 -0.5 2,259,483 - CA264_09725 0.12 +0.0 2,259,556 + CA264_09725 0.25 -0.8 2,259,557 - CA264_09725 0.25 -0.2 2,259,559 + CA264_09725 0.25 +0.7 2,259,695 - CA264_09725 0.49 +0.4 2,259,767 + CA264_09725 0.62 -0.6 2,259,785 + CA264_09725 0.65 -0.5 2,259,786 - CA264_09725 0.65 +0.1 2,259,955 - -0.1 2,259,955 - -0.1 2,259,959 + -0.3 2,259,959 + -0.5 2,259,996 + -0.6 2,260,027 - -0.5 2,260,027 - -0.4 2,260,083 - -1.3 2,260,174 + CA264_09730 0.23 -2.1 2,260,205 - CA264_09730 0.29 +0.4 2,260,211 - CA264_09730 0.30 -0.0 2,260,217 + CA264_09730 0.31 -0.5 2,260,292 + CA264_09730 0.45 -0.9 2,260,354 - CA264_09730 0.56 -0.8 2,260,354 - CA264_09730 0.56 -0.5 2,260,354 - CA264_09730 0.56 -1.4 2,260,580 - -1.0 2,260,580 - -0.1 2,260,580 - +0.0 2,260,584 - -0.1 2,260,584 - +0.5 2,260,584 - +0.5 2,260,584 - +0.4 2,260,584 - +0.2 2,260,626 - +1.1 2,260,626 - -0.1 2,260,945 - CA264_09735 0.82 +0.5 2,260,961 - CA264_09735 0.86 +0.5 2,261,201 + -0.2 2,261,336 + +0.2 2,261,336 + -0.3 2,261,436 + -0.4 2,261,502 - -1.7 2,261,514 + -0.3 2,261,514 + -0.1 2,261,534 + +0.2 2,261,563 - -0.2
Or see this region's nucleotide sequence